Job ID = 12265382 SRX = SRX6817535 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 39810953 spots for SRR10084526/SRR10084526.sra Written 39810953 spots for SRR10084526/SRR10084526.sra fastq に変換しました。 bowtie でマッピング中... Your job 12266490 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:59:28 39810953 reads; of these: 39810953 (100.00%) were paired; of these: 13622479 (34.22%) aligned concordantly 0 times 17988398 (45.18%) aligned concordantly exactly 1 time 8200076 (20.60%) aligned concordantly >1 times ---- 13622479 pairs aligned concordantly 0 times; of these: 3213656 (23.59%) aligned discordantly 1 time ---- 10408823 pairs aligned 0 times concordantly or discordantly; of these: 20817646 mates make up the pairs; of these: 15862614 (76.20%) aligned 0 times 938772 (4.51%) aligned exactly 1 time 4016260 (19.29%) aligned >1 times 80.08% overall alignment rate Time searching: 01:59:29 Overall time: 01:59:29 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 48 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 12667977 / 29188782 = 0.4340 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:20:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:20:55: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:20:55: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:21:01: 1000000 INFO @ Sat, 03 Apr 2021 09:21:08: 2000000 INFO @ Sat, 03 Apr 2021 09:21:15: 3000000 INFO @ Sat, 03 Apr 2021 09:21:21: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:21:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:21:25: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:21:25: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:21:28: 5000000 INFO @ Sat, 03 Apr 2021 09:21:34: 1000000 INFO @ Sat, 03 Apr 2021 09:21:35: 6000000 INFO @ Sat, 03 Apr 2021 09:21:42: 7000000 INFO @ Sat, 03 Apr 2021 09:21:42: 2000000 INFO @ Sat, 03 Apr 2021 09:21:50: 8000000 INFO @ Sat, 03 Apr 2021 09:21:51: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 09:21:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 09:21:55: #1 read tag files... INFO @ Sat, 03 Apr 2021 09:21:55: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 09:21:57: 9000000 INFO @ Sat, 03 Apr 2021 09:22:00: 4000000 INFO @ Sat, 03 Apr 2021 09:22:02: 1000000 INFO @ Sat, 03 Apr 2021 09:22:04: 10000000 INFO @ Sat, 03 Apr 2021 09:22:09: 5000000 INFO @ Sat, 03 Apr 2021 09:22:10: 2000000 INFO @ Sat, 03 Apr 2021 09:22:11: 11000000 INFO @ Sat, 03 Apr 2021 09:22:17: 3000000 INFO @ Sat, 03 Apr 2021 09:22:17: 6000000 INFO @ Sat, 03 Apr 2021 09:22:18: 12000000 INFO @ Sat, 03 Apr 2021 09:22:24: 4000000 INFO @ Sat, 03 Apr 2021 09:22:25: 7000000 INFO @ Sat, 03 Apr 2021 09:22:26: 13000000 INFO @ Sat, 03 Apr 2021 09:22:31: 5000000 INFO @ Sat, 03 Apr 2021 09:22:33: 14000000 INFO @ Sat, 03 Apr 2021 09:22:34: 8000000 INFO @ Sat, 03 Apr 2021 09:22:38: 6000000 INFO @ Sat, 03 Apr 2021 09:22:40: 15000000 INFO @ Sat, 03 Apr 2021 09:22:42: 9000000 INFO @ Sat, 03 Apr 2021 09:22:45: 7000000 INFO @ Sat, 03 Apr 2021 09:22:46: 16000000 INFO @ Sat, 03 Apr 2021 09:22:51: 10000000 INFO @ Sat, 03 Apr 2021 09:22:53: 8000000 INFO @ Sat, 03 Apr 2021 09:22:53: 17000000 INFO @ Sat, 03 Apr 2021 09:23:00: 9000000 INFO @ Sat, 03 Apr 2021 09:23:00: 11000000 INFO @ Sat, 03 Apr 2021 09:23:00: 18000000 INFO @ Sat, 03 Apr 2021 09:23:07: 10000000 INFO @ Sat, 03 Apr 2021 09:23:07: 19000000 INFO @ Sat, 03 Apr 2021 09:23:09: 12000000 INFO @ Sat, 03 Apr 2021 09:23:14: 11000000 INFO @ Sat, 03 Apr 2021 09:23:15: 20000000 INFO @ Sat, 03 Apr 2021 09:23:17: 13000000 INFO @ Sat, 03 Apr 2021 09:23:21: 12000000 INFO @ Sat, 03 Apr 2021 09:23:22: 21000000 INFO @ Sat, 03 Apr 2021 09:23:26: 14000000 INFO @ Sat, 03 Apr 2021 09:23:29: 13000000 INFO @ Sat, 03 Apr 2021 09:23:29: 22000000 INFO @ Sat, 03 Apr 2021 09:23:34: 15000000 INFO @ Sat, 03 Apr 2021 09:23:36: 14000000 INFO @ Sat, 03 Apr 2021 09:23:36: 23000000 INFO @ Sat, 03 Apr 2021 09:23:42: 16000000 INFO @ Sat, 03 Apr 2021 09:23:43: 15000000 INFO @ Sat, 03 Apr 2021 09:23:43: 24000000 INFO @ Sat, 03 Apr 2021 09:23:50: 16000000 INFO @ Sat, 03 Apr 2021 09:23:50: 25000000 INFO @ Sat, 03 Apr 2021 09:23:50: 17000000 INFO @ Sat, 03 Apr 2021 09:23:56: 17000000 INFO @ Sat, 03 Apr 2021 09:23:57: 26000000 INFO @ Sat, 03 Apr 2021 09:23:58: 18000000 INFO @ Sat, 03 Apr 2021 09:24:03: 27000000 INFO @ Sat, 03 Apr 2021 09:24:03: 18000000 INFO @ Sat, 03 Apr 2021 09:24:06: 19000000 INFO @ Sat, 03 Apr 2021 09:24:10: 28000000 INFO @ Sat, 03 Apr 2021 09:24:10: 19000000 INFO @ Sat, 03 Apr 2021 09:24:14: 20000000 INFO @ Sat, 03 Apr 2021 09:24:17: 29000000 INFO @ Sat, 03 Apr 2021 09:24:17: 20000000 INFO @ Sat, 03 Apr 2021 09:24:23: 21000000 INFO @ Sat, 03 Apr 2021 09:24:24: 21000000 INFO @ Sat, 03 Apr 2021 09:24:24: 30000000 INFO @ Sat, 03 Apr 2021 09:24:31: 22000000 INFO @ Sat, 03 Apr 2021 09:24:31: 22000000 INFO @ Sat, 03 Apr 2021 09:24:31: 31000000 INFO @ Sat, 03 Apr 2021 09:24:38: 32000000 INFO @ Sat, 03 Apr 2021 09:24:39: 23000000 INFO @ Sat, 03 Apr 2021 09:24:40: 23000000 INFO @ Sat, 03 Apr 2021 09:24:45: 33000000 INFO @ Sat, 03 Apr 2021 09:24:47: 24000000 INFO @ Sat, 03 Apr 2021 09:24:48: 24000000 INFO @ Sat, 03 Apr 2021 09:24:53: 34000000 INFO @ Sat, 03 Apr 2021 09:24:55: 25000000 INFO @ Sat, 03 Apr 2021 09:24:56: 25000000 INFO @ Sat, 03 Apr 2021 09:25:00: 35000000 INFO @ Sat, 03 Apr 2021 09:25:04: 26000000 INFO @ Sat, 03 Apr 2021 09:25:04: 26000000 INFO @ Sat, 03 Apr 2021 09:25:08: 36000000 INFO @ Sat, 03 Apr 2021 09:25:12: 27000000 INFO @ Sat, 03 Apr 2021 09:25:12: 27000000 INFO @ Sat, 03 Apr 2021 09:25:16: 37000000 INFO @ Sat, 03 Apr 2021 09:25:20: 28000000 INFO @ Sat, 03 Apr 2021 09:25:20: 28000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 09:25:24: 38000000 INFO @ Sat, 03 Apr 2021 09:25:27: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 09:25:27: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 09:25:27: #1 total tags in treatment: 14540537 INFO @ Sat, 03 Apr 2021 09:25:27: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:25:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:25:28: #1 tags after filtering in treatment: 11865092 INFO @ Sat, 03 Apr 2021 09:25:28: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 09:25:28: #1 finished! INFO @ Sat, 03 Apr 2021 09:25:28: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:25:28: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:25:28: 29000000 INFO @ Sat, 03 Apr 2021 09:25:29: #2 number of paired peaks: 272 WARNING @ Sat, 03 Apr 2021 09:25:29: Fewer paired peaks (272) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 272 pairs to build model! INFO @ Sat, 03 Apr 2021 09:25:29: start model_add_line... INFO @ Sat, 03 Apr 2021 09:25:29: start X-correlation... INFO @ Sat, 03 Apr 2021 09:25:29: end of X-cor INFO @ Sat, 03 Apr 2021 09:25:29: #2 finished! INFO @ Sat, 03 Apr 2021 09:25:29: #2 predicted fragment length is 202 bps INFO @ Sat, 03 Apr 2021 09:25:29: #2 alternative fragment length(s) may be 202 bps INFO @ Sat, 03 Apr 2021 09:25:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05_model.r WARNING @ Sat, 03 Apr 2021 09:25:29: #2 Since the d (202) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:25:29: #2 You may need to consider one of the other alternative d(s): 202 WARNING @ Sat, 03 Apr 2021 09:25:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:25:29: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:25:29: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:25:29: 29000000 INFO @ Sat, 03 Apr 2021 09:25:36: 30000000 INFO @ Sat, 03 Apr 2021 09:25:37: 30000000 INFO @ Sat, 03 Apr 2021 09:25:44: 31000000 INFO @ Sat, 03 Apr 2021 09:25:45: 31000000 INFO @ Sat, 03 Apr 2021 09:25:52: 32000000 INFO @ Sat, 03 Apr 2021 09:25:53: 32000000 INFO @ Sat, 03 Apr 2021 09:25:54: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:26:00: 33000000 INFO @ Sat, 03 Apr 2021 09:26:01: 33000000 INFO @ Sat, 03 Apr 2021 09:26:07: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05_peaks.xls INFO @ Sat, 03 Apr 2021 09:26:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:26:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.05_summits.bed INFO @ Sat, 03 Apr 2021 09:26:07: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (7245 records, 4 fields): 35 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:26:09: 34000000 INFO @ Sat, 03 Apr 2021 09:26:09: 34000000 INFO @ Sat, 03 Apr 2021 09:26:17: 35000000 INFO @ Sat, 03 Apr 2021 09:26:17: 35000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 09:26:25: 36000000 INFO @ Sat, 03 Apr 2021 09:26:25: 36000000 INFO @ Sat, 03 Apr 2021 09:26:33: 37000000 INFO @ Sat, 03 Apr 2021 09:26:33: 37000000 INFO @ Sat, 03 Apr 2021 09:26:41: 38000000 INFO @ Sat, 03 Apr 2021 09:26:41: 38000000 INFO @ Sat, 03 Apr 2021 09:26:44: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 09:26:44: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 09:26:44: #1 total tags in treatment: 14540537 INFO @ Sat, 03 Apr 2021 09:26:44: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:26:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:26:44: #1 tags after filtering in treatment: 11865092 INFO @ Sat, 03 Apr 2021 09:26:44: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 09:26:44: #1 finished! INFO @ Sat, 03 Apr 2021 09:26:44: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:26:44: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:26:45: #1 tag size is determined as 150 bps INFO @ Sat, 03 Apr 2021 09:26:45: #1 tag size = 150 INFO @ Sat, 03 Apr 2021 09:26:45: #1 total tags in treatment: 14540537 INFO @ Sat, 03 Apr 2021 09:26:45: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 09:26:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 09:26:45: #1 tags after filtering in treatment: 11865092 INFO @ Sat, 03 Apr 2021 09:26:45: #1 Redundant rate of treatment: 0.18 INFO @ Sat, 03 Apr 2021 09:26:45: #1 finished! INFO @ Sat, 03 Apr 2021 09:26:45: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 09:26:45: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 09:26:45: #2 number of paired peaks: 272 WARNING @ Sat, 03 Apr 2021 09:26:45: Fewer paired peaks (272) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 272 pairs to build model! INFO @ Sat, 03 Apr 2021 09:26:45: start model_add_line... INFO @ Sat, 03 Apr 2021 09:26:45: start X-correlation... INFO @ Sat, 03 Apr 2021 09:26:45: end of X-cor INFO @ Sat, 03 Apr 2021 09:26:45: #2 finished! INFO @ Sat, 03 Apr 2021 09:26:45: #2 predicted fragment length is 202 bps INFO @ Sat, 03 Apr 2021 09:26:45: #2 alternative fragment length(s) may be 202 bps INFO @ Sat, 03 Apr 2021 09:26:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10_model.r WARNING @ Sat, 03 Apr 2021 09:26:45: #2 Since the d (202) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:26:45: #2 You may need to consider one of the other alternative d(s): 202 WARNING @ Sat, 03 Apr 2021 09:26:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:26:45: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:26:45: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:26:46: #2 number of paired peaks: 272 WARNING @ Sat, 03 Apr 2021 09:26:46: Fewer paired peaks (272) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 272 pairs to build model! INFO @ Sat, 03 Apr 2021 09:26:46: start model_add_line... INFO @ Sat, 03 Apr 2021 09:26:46: start X-correlation... INFO @ Sat, 03 Apr 2021 09:26:46: end of X-cor INFO @ Sat, 03 Apr 2021 09:26:46: #2 finished! INFO @ Sat, 03 Apr 2021 09:26:46: #2 predicted fragment length is 202 bps INFO @ Sat, 03 Apr 2021 09:26:46: #2 alternative fragment length(s) may be 202 bps INFO @ Sat, 03 Apr 2021 09:26:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20_model.r WARNING @ Sat, 03 Apr 2021 09:26:46: #2 Since the d (202) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 09:26:46: #2 You may need to consider one of the other alternative d(s): 202 WARNING @ Sat, 03 Apr 2021 09:26:46: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 09:26:46: #3 Call peaks... INFO @ Sat, 03 Apr 2021 09:26:46: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 09:27:10: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:27:12: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 09:27:23: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10_peaks.xls INFO @ Sat, 03 Apr 2021 09:27:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:27:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.10_summits.bed INFO @ Sat, 03 Apr 2021 09:27:23: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3516 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 09:27:26: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20_peaks.xls INFO @ Sat, 03 Apr 2021 09:27:26: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 09:27:26: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6817535/SRX6817535.20_summits.bed INFO @ Sat, 03 Apr 2021 09:27:26: Done! pass1 - making usageList (11 chroms): 1 millis pass2 - checking and writing primary data (1326 records, 4 fields): 3 millis CompletedMACS2peakCalling