Job ID = 5720829 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-15T16:43:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:43:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:43:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:43:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:43:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:08:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:08:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:08:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:26:28 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 85,436,864 reads read : 170,873,728 reads written : 170,873,728 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:18:52 85436864 reads; of these: 85436864 (100.00%) were paired; of these: 3544470 (4.15%) aligned concordantly 0 times 74899800 (87.67%) aligned concordantly exactly 1 time 6992594 (8.18%) aligned concordantly >1 times ---- 3544470 pairs aligned concordantly 0 times; of these: 190362 (5.37%) aligned discordantly 1 time ---- 3354108 pairs aligned 0 times concordantly or discordantly; of these: 6708216 mates make up the pairs; of these: 4553166 (67.87%) aligned 0 times 1805168 (26.91%) aligned exactly 1 time 349882 (5.22%) aligned >1 times 97.34% overall alignment rate Time searching: 01:18:52 Overall time: 01:18:52 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 68 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 16970739 / 82053078 = 0.2068 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:31:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:31:14: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:31:14: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:31:19: 1000000 INFO @ Thu, 16 Apr 2020 04:31:23: 2000000 INFO @ Thu, 16 Apr 2020 04:31:28: 3000000 INFO @ Thu, 16 Apr 2020 04:31:32: 4000000 INFO @ Thu, 16 Apr 2020 04:31:37: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:31:41: 6000000 INFO @ Thu, 16 Apr 2020 04:31:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:31:44: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:31:44: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:31:46: 7000000 INFO @ Thu, 16 Apr 2020 04:31:49: 1000000 INFO @ Thu, 16 Apr 2020 04:31:51: 8000000 INFO @ Thu, 16 Apr 2020 04:31:54: 2000000 INFO @ Thu, 16 Apr 2020 04:31:56: 9000000 INFO @ Thu, 16 Apr 2020 04:31:59: 3000000 INFO @ Thu, 16 Apr 2020 04:32:01: 10000000 INFO @ Thu, 16 Apr 2020 04:32:04: 4000000 INFO @ Thu, 16 Apr 2020 04:32:06: 11000000 INFO @ Thu, 16 Apr 2020 04:32:09: 5000000 INFO @ Thu, 16 Apr 2020 04:32:11: 12000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:32:14: 6000000 INFO @ Thu, 16 Apr 2020 04:32:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:32:16: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:32:16: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:32:16: 13000000 INFO @ Thu, 16 Apr 2020 04:32:19: 7000000 INFO @ Thu, 16 Apr 2020 04:32:21: 1000000 INFO @ Thu, 16 Apr 2020 04:32:21: 14000000 INFO @ Thu, 16 Apr 2020 04:32:24: 8000000 INFO @ Thu, 16 Apr 2020 04:32:26: 2000000 INFO @ Thu, 16 Apr 2020 04:32:27: 15000000 INFO @ Thu, 16 Apr 2020 04:32:29: 9000000 INFO @ Thu, 16 Apr 2020 04:32:31: 3000000 INFO @ Thu, 16 Apr 2020 04:32:32: 16000000 INFO @ Thu, 16 Apr 2020 04:32:35: 10000000 INFO @ Thu, 16 Apr 2020 04:32:37: 4000000 INFO @ Thu, 16 Apr 2020 04:32:37: 17000000 INFO @ Thu, 16 Apr 2020 04:32:40: 11000000 INFO @ Thu, 16 Apr 2020 04:32:42: 5000000 INFO @ Thu, 16 Apr 2020 04:32:42: 18000000 INFO @ Thu, 16 Apr 2020 04:32:45: 12000000 INFO @ Thu, 16 Apr 2020 04:32:47: 6000000 INFO @ Thu, 16 Apr 2020 04:32:47: 19000000 INFO @ Thu, 16 Apr 2020 04:32:50: 13000000 INFO @ Thu, 16 Apr 2020 04:32:52: 7000000 INFO @ Thu, 16 Apr 2020 04:32:53: 20000000 INFO @ Thu, 16 Apr 2020 04:32:55: 14000000 INFO @ Thu, 16 Apr 2020 04:32:57: 8000000 INFO @ Thu, 16 Apr 2020 04:32:58: 21000000 INFO @ Thu, 16 Apr 2020 04:33:00: 15000000 INFO @ Thu, 16 Apr 2020 04:33:02: 9000000 INFO @ Thu, 16 Apr 2020 04:33:03: 22000000 INFO @ Thu, 16 Apr 2020 04:33:05: 16000000 INFO @ Thu, 16 Apr 2020 04:33:07: 10000000 INFO @ Thu, 16 Apr 2020 04:33:08: 23000000 INFO @ Thu, 16 Apr 2020 04:33:10: 17000000 INFO @ Thu, 16 Apr 2020 04:33:12: 11000000 INFO @ Thu, 16 Apr 2020 04:33:13: 24000000 INFO @ Thu, 16 Apr 2020 04:33:15: 18000000 INFO @ Thu, 16 Apr 2020 04:33:18: 12000000 INFO @ Thu, 16 Apr 2020 04:33:19: 25000000 INFO @ Thu, 16 Apr 2020 04:33:20: 19000000 INFO @ Thu, 16 Apr 2020 04:33:23: 13000000 INFO @ Thu, 16 Apr 2020 04:33:25: 26000000 INFO @ Thu, 16 Apr 2020 04:33:25: 20000000 INFO @ Thu, 16 Apr 2020 04:33:28: 14000000 INFO @ Thu, 16 Apr 2020 04:33:30: 21000000 INFO @ Thu, 16 Apr 2020 04:33:31: 27000000 INFO @ Thu, 16 Apr 2020 04:33:33: 15000000 INFO @ Thu, 16 Apr 2020 04:33:35: 22000000 INFO @ Thu, 16 Apr 2020 04:33:37: 28000000 INFO @ Thu, 16 Apr 2020 04:33:38: 16000000 INFO @ Thu, 16 Apr 2020 04:33:40: 23000000 INFO @ Thu, 16 Apr 2020 04:33:42: 29000000 INFO @ Thu, 16 Apr 2020 04:33:43: 17000000 INFO @ Thu, 16 Apr 2020 04:33:46: 24000000 INFO @ Thu, 16 Apr 2020 04:33:47: 30000000 INFO @ Thu, 16 Apr 2020 04:33:48: 18000000 INFO @ Thu, 16 Apr 2020 04:33:51: 25000000 INFO @ Thu, 16 Apr 2020 04:33:52: 31000000 INFO @ Thu, 16 Apr 2020 04:33:53: 19000000 INFO @ Thu, 16 Apr 2020 04:33:57: 26000000 INFO @ Thu, 16 Apr 2020 04:33:57: 32000000 INFO @ Thu, 16 Apr 2020 04:33:58: 20000000 INFO @ Thu, 16 Apr 2020 04:34:02: 33000000 INFO @ Thu, 16 Apr 2020 04:34:03: 27000000 INFO @ Thu, 16 Apr 2020 04:34:03: 21000000 INFO @ Thu, 16 Apr 2020 04:34:07: 34000000 INFO @ Thu, 16 Apr 2020 04:34:08: 22000000 INFO @ Thu, 16 Apr 2020 04:34:09: 28000000 INFO @ Thu, 16 Apr 2020 04:34:12: 35000000 INFO @ Thu, 16 Apr 2020 04:34:13: 23000000 INFO @ Thu, 16 Apr 2020 04:34:14: 29000000 INFO @ Thu, 16 Apr 2020 04:34:18: 36000000 INFO @ Thu, 16 Apr 2020 04:34:18: 24000000 INFO @ Thu, 16 Apr 2020 04:34:19: 30000000 INFO @ Thu, 16 Apr 2020 04:34:23: 37000000 INFO @ Thu, 16 Apr 2020 04:34:24: 31000000 INFO @ Thu, 16 Apr 2020 04:34:24: 25000000 INFO @ Thu, 16 Apr 2020 04:34:28: 38000000 INFO @ Thu, 16 Apr 2020 04:34:29: 32000000 INFO @ Thu, 16 Apr 2020 04:34:30: 26000000 INFO @ Thu, 16 Apr 2020 04:34:33: 39000000 INFO @ Thu, 16 Apr 2020 04:34:34: 33000000 INFO @ Thu, 16 Apr 2020 04:34:36: 27000000 INFO @ Thu, 16 Apr 2020 04:34:38: 40000000 INFO @ Thu, 16 Apr 2020 04:34:39: 34000000 INFO @ Thu, 16 Apr 2020 04:34:42: 28000000 INFO @ Thu, 16 Apr 2020 04:34:43: 41000000 INFO @ Thu, 16 Apr 2020 04:34:44: 35000000 INFO @ Thu, 16 Apr 2020 04:34:47: 29000000 INFO @ Thu, 16 Apr 2020 04:34:48: 42000000 INFO @ Thu, 16 Apr 2020 04:34:49: 36000000 INFO @ Thu, 16 Apr 2020 04:34:52: 30000000 INFO @ Thu, 16 Apr 2020 04:34:53: 43000000 INFO @ Thu, 16 Apr 2020 04:34:54: 37000000 INFO @ Thu, 16 Apr 2020 04:34:57: 31000000 INFO @ Thu, 16 Apr 2020 04:34:58: 44000000 INFO @ Thu, 16 Apr 2020 04:35:00: 38000000 INFO @ Thu, 16 Apr 2020 04:35:02: 32000000 INFO @ Thu, 16 Apr 2020 04:35:04: 45000000 INFO @ Thu, 16 Apr 2020 04:35:05: 39000000 INFO @ Thu, 16 Apr 2020 04:35:07: 33000000 INFO @ Thu, 16 Apr 2020 04:35:09: 46000000 INFO @ Thu, 16 Apr 2020 04:35:10: 40000000 INFO @ Thu, 16 Apr 2020 04:35:12: 34000000 INFO @ Thu, 16 Apr 2020 04:35:14: 47000000 INFO @ Thu, 16 Apr 2020 04:35:15: 41000000 INFO @ Thu, 16 Apr 2020 04:35:17: 35000000 INFO @ Thu, 16 Apr 2020 04:35:19: 48000000 INFO @ Thu, 16 Apr 2020 04:35:20: 42000000 INFO @ Thu, 16 Apr 2020 04:35:22: 36000000 INFO @ Thu, 16 Apr 2020 04:35:24: 49000000 INFO @ Thu, 16 Apr 2020 04:35:25: 43000000 INFO @ Thu, 16 Apr 2020 04:35:27: 37000000 INFO @ Thu, 16 Apr 2020 04:35:29: 50000000 INFO @ Thu, 16 Apr 2020 04:35:30: 44000000 INFO @ Thu, 16 Apr 2020 04:35:33: 38000000 INFO @ Thu, 16 Apr 2020 04:35:34: 51000000 INFO @ Thu, 16 Apr 2020 04:35:35: 45000000 INFO @ Thu, 16 Apr 2020 04:35:38: 39000000 INFO @ Thu, 16 Apr 2020 04:35:39: 52000000 INFO @ Thu, 16 Apr 2020 04:35:40: 46000000 INFO @ Thu, 16 Apr 2020 04:35:43: 40000000 INFO @ Thu, 16 Apr 2020 04:35:44: 53000000 INFO @ Thu, 16 Apr 2020 04:35:45: 47000000 INFO @ Thu, 16 Apr 2020 04:35:48: 41000000 INFO @ Thu, 16 Apr 2020 04:35:50: 54000000 INFO @ Thu, 16 Apr 2020 04:35:51: 48000000 INFO @ Thu, 16 Apr 2020 04:35:53: 42000000 INFO @ Thu, 16 Apr 2020 04:35:55: 55000000 INFO @ Thu, 16 Apr 2020 04:35:56: 49000000 INFO @ Thu, 16 Apr 2020 04:35:58: 43000000 INFO @ Thu, 16 Apr 2020 04:36:00: 56000000 INFO @ Thu, 16 Apr 2020 04:36:01: 50000000 INFO @ Thu, 16 Apr 2020 04:36:03: 44000000 INFO @ Thu, 16 Apr 2020 04:36:05: 57000000 INFO @ Thu, 16 Apr 2020 04:36:06: 51000000 INFO @ Thu, 16 Apr 2020 04:36:08: 45000000 INFO @ Thu, 16 Apr 2020 04:36:10: 58000000 INFO @ Thu, 16 Apr 2020 04:36:11: 52000000 INFO @ Thu, 16 Apr 2020 04:36:13: 46000000 INFO @ Thu, 16 Apr 2020 04:36:15: 59000000 INFO @ Thu, 16 Apr 2020 04:36:16: 53000000 INFO @ Thu, 16 Apr 2020 04:36:18: 47000000 INFO @ Thu, 16 Apr 2020 04:36:20: 60000000 INFO @ Thu, 16 Apr 2020 04:36:21: 54000000 INFO @ Thu, 16 Apr 2020 04:36:23: 48000000 INFO @ Thu, 16 Apr 2020 04:36:25: 61000000 INFO @ Thu, 16 Apr 2020 04:36:26: 55000000 INFO @ Thu, 16 Apr 2020 04:36:29: 49000000 INFO @ Thu, 16 Apr 2020 04:36:30: 62000000 INFO @ Thu, 16 Apr 2020 04:36:31: 56000000 INFO @ Thu, 16 Apr 2020 04:36:34: 50000000 INFO @ Thu, 16 Apr 2020 04:36:35: 63000000 INFO @ Thu, 16 Apr 2020 04:36:36: 57000000 INFO @ Thu, 16 Apr 2020 04:36:39: 51000000 INFO @ Thu, 16 Apr 2020 04:36:40: 64000000 INFO @ Thu, 16 Apr 2020 04:36:41: 58000000 INFO @ Thu, 16 Apr 2020 04:36:44: 52000000 INFO @ Thu, 16 Apr 2020 04:36:45: 65000000 INFO @ Thu, 16 Apr 2020 04:36:46: 59000000 INFO @ Thu, 16 Apr 2020 04:36:49: 53000000 INFO @ Thu, 16 Apr 2020 04:36:50: 66000000 INFO @ Thu, 16 Apr 2020 04:36:52: 60000000 INFO @ Thu, 16 Apr 2020 04:36:54: 54000000 INFO @ Thu, 16 Apr 2020 04:36:55: 67000000 INFO @ Thu, 16 Apr 2020 04:36:57: 61000000 INFO @ Thu, 16 Apr 2020 04:36:59: 55000000 INFO @ Thu, 16 Apr 2020 04:37:00: 68000000 INFO @ Thu, 16 Apr 2020 04:37:02: 62000000 INFO @ Thu, 16 Apr 2020 04:37:04: 56000000 INFO @ Thu, 16 Apr 2020 04:37:05: 69000000 INFO @ Thu, 16 Apr 2020 04:37:07: 63000000 INFO @ Thu, 16 Apr 2020 04:37:09: 57000000 INFO @ Thu, 16 Apr 2020 04:37:10: 70000000 INFO @ Thu, 16 Apr 2020 04:37:12: 64000000 INFO @ Thu, 16 Apr 2020 04:37:15: 58000000 INFO @ Thu, 16 Apr 2020 04:37:15: 71000000 INFO @ Thu, 16 Apr 2020 04:37:17: 65000000 INFO @ Thu, 16 Apr 2020 04:37:20: 59000000 INFO @ Thu, 16 Apr 2020 04:37:20: 72000000 INFO @ Thu, 16 Apr 2020 04:37:22: 66000000 INFO @ Thu, 16 Apr 2020 04:37:25: 60000000 INFO @ Thu, 16 Apr 2020 04:37:25: 73000000 INFO @ Thu, 16 Apr 2020 04:37:27: 67000000 INFO @ Thu, 16 Apr 2020 04:37:30: 61000000 INFO @ Thu, 16 Apr 2020 04:37:30: 74000000 INFO @ Thu, 16 Apr 2020 04:37:32: 68000000 INFO @ Thu, 16 Apr 2020 04:37:35: 62000000 INFO @ Thu, 16 Apr 2020 04:37:35: 75000000 INFO @ Thu, 16 Apr 2020 04:37:37: 69000000 INFO @ Thu, 16 Apr 2020 04:37:40: 76000000 INFO @ Thu, 16 Apr 2020 04:37:40: 63000000 INFO @ Thu, 16 Apr 2020 04:37:42: 70000000 INFO @ Thu, 16 Apr 2020 04:37:45: 77000000 INFO @ Thu, 16 Apr 2020 04:37:45: 64000000 INFO @ Thu, 16 Apr 2020 04:37:47: 71000000 INFO @ Thu, 16 Apr 2020 04:37:50: 78000000 INFO @ Thu, 16 Apr 2020 04:37:50: 65000000 INFO @ Thu, 16 Apr 2020 04:37:52: 72000000 INFO @ Thu, 16 Apr 2020 04:37:55: 79000000 INFO @ Thu, 16 Apr 2020 04:37:56: 66000000 INFO @ Thu, 16 Apr 2020 04:37:57: 73000000 INFO @ Thu, 16 Apr 2020 04:38:00: 80000000 INFO @ Thu, 16 Apr 2020 04:38:01: 67000000 INFO @ Thu, 16 Apr 2020 04:38:02: 74000000 INFO @ Thu, 16 Apr 2020 04:38:05: 81000000 INFO @ Thu, 16 Apr 2020 04:38:06: 68000000 INFO @ Thu, 16 Apr 2020 04:38:07: 75000000 INFO @ Thu, 16 Apr 2020 04:38:11: 82000000 INFO @ Thu, 16 Apr 2020 04:38:11: 69000000 INFO @ Thu, 16 Apr 2020 04:38:13: 76000000 INFO @ Thu, 16 Apr 2020 04:38:16: 83000000 INFO @ Thu, 16 Apr 2020 04:38:16: 70000000 INFO @ Thu, 16 Apr 2020 04:38:18: 77000000 INFO @ Thu, 16 Apr 2020 04:38:21: 84000000 INFO @ Thu, 16 Apr 2020 04:38:21: 71000000 INFO @ Thu, 16 Apr 2020 04:38:23: 78000000 INFO @ Thu, 16 Apr 2020 04:38:26: 85000000 INFO @ Thu, 16 Apr 2020 04:38:26: 72000000 INFO @ Thu, 16 Apr 2020 04:38:28: 79000000 INFO @ Thu, 16 Apr 2020 04:38:31: 86000000 INFO @ Thu, 16 Apr 2020 04:38:31: 73000000 INFO @ Thu, 16 Apr 2020 04:38:33: 80000000 INFO @ Thu, 16 Apr 2020 04:38:36: 87000000 INFO @ Thu, 16 Apr 2020 04:38:36: 74000000 INFO @ Thu, 16 Apr 2020 04:38:38: 81000000 INFO @ Thu, 16 Apr 2020 04:38:41: 75000000 INFO @ Thu, 16 Apr 2020 04:38:41: 88000000 INFO @ Thu, 16 Apr 2020 04:38:43: 82000000 INFO @ Thu, 16 Apr 2020 04:38:46: 76000000 INFO @ Thu, 16 Apr 2020 04:38:46: 89000000 INFO @ Thu, 16 Apr 2020 04:38:48: 83000000 INFO @ Thu, 16 Apr 2020 04:38:51: 77000000 INFO @ Thu, 16 Apr 2020 04:38:51: 90000000 INFO @ Thu, 16 Apr 2020 04:38:53: 84000000 INFO @ Thu, 16 Apr 2020 04:38:56: 78000000 INFO @ Thu, 16 Apr 2020 04:38:57: 91000000 INFO @ Thu, 16 Apr 2020 04:38:58: 85000000 INFO @ Thu, 16 Apr 2020 04:39:01: 79000000 INFO @ Thu, 16 Apr 2020 04:39:02: 92000000 INFO @ Thu, 16 Apr 2020 04:39:03: 86000000 INFO @ Thu, 16 Apr 2020 04:39:06: 80000000 INFO @ Thu, 16 Apr 2020 04:39:07: 93000000 INFO @ Thu, 16 Apr 2020 04:39:08: 87000000 INFO @ Thu, 16 Apr 2020 04:39:11: 81000000 INFO @ Thu, 16 Apr 2020 04:39:12: 94000000 INFO @ Thu, 16 Apr 2020 04:39:14: 88000000 INFO @ Thu, 16 Apr 2020 04:39:17: 82000000 INFO @ Thu, 16 Apr 2020 04:39:17: 95000000 INFO @ Thu, 16 Apr 2020 04:39:19: 89000000 INFO @ Thu, 16 Apr 2020 04:39:22: 83000000 INFO @ Thu, 16 Apr 2020 04:39:22: 96000000 INFO @ Thu, 16 Apr 2020 04:39:24: 90000000 INFO @ Thu, 16 Apr 2020 04:39:27: 84000000 INFO @ Thu, 16 Apr 2020 04:39:27: 97000000 INFO @ Thu, 16 Apr 2020 04:39:29: 91000000 INFO @ Thu, 16 Apr 2020 04:39:32: 85000000 INFO @ Thu, 16 Apr 2020 04:39:32: 98000000 INFO @ Thu, 16 Apr 2020 04:39:34: 92000000 INFO @ Thu, 16 Apr 2020 04:39:37: 86000000 INFO @ Thu, 16 Apr 2020 04:39:37: 99000000 INFO @ Thu, 16 Apr 2020 04:39:39: 93000000 INFO @ Thu, 16 Apr 2020 04:39:42: 87000000 INFO @ Thu, 16 Apr 2020 04:39:42: 100000000 INFO @ Thu, 16 Apr 2020 04:39:44: 94000000 INFO @ Thu, 16 Apr 2020 04:39:47: 88000000 INFO @ Thu, 16 Apr 2020 04:39:48: 101000000 INFO @ Thu, 16 Apr 2020 04:39:49: 95000000 INFO @ Thu, 16 Apr 2020 04:39:52: 89000000 INFO @ Thu, 16 Apr 2020 04:39:53: 102000000 INFO @ Thu, 16 Apr 2020 04:39:54: 96000000 INFO @ Thu, 16 Apr 2020 04:39:57: 90000000 INFO @ Thu, 16 Apr 2020 04:39:58: 103000000 INFO @ Thu, 16 Apr 2020 04:39:59: 97000000 INFO @ Thu, 16 Apr 2020 04:40:03: 91000000 INFO @ Thu, 16 Apr 2020 04:40:03: 104000000 INFO @ Thu, 16 Apr 2020 04:40:04: 98000000 INFO @ Thu, 16 Apr 2020 04:40:08: 92000000 INFO @ Thu, 16 Apr 2020 04:40:08: 105000000 INFO @ Thu, 16 Apr 2020 04:40:09: 99000000 INFO @ Thu, 16 Apr 2020 04:40:13: 93000000 INFO @ Thu, 16 Apr 2020 04:40:13: 106000000 INFO @ Thu, 16 Apr 2020 04:40:14: 100000000 INFO @ Thu, 16 Apr 2020 04:40:18: 94000000 INFO @ Thu, 16 Apr 2020 04:40:18: 107000000 INFO @ Thu, 16 Apr 2020 04:40:20: 101000000 INFO @ Thu, 16 Apr 2020 04:40:23: 95000000 INFO @ Thu, 16 Apr 2020 04:40:23: 108000000 INFO @ Thu, 16 Apr 2020 04:40:25: 102000000 INFO @ Thu, 16 Apr 2020 04:40:28: 96000000 INFO @ Thu, 16 Apr 2020 04:40:29: 109000000 INFO @ Thu, 16 Apr 2020 04:40:30: 103000000 INFO @ Thu, 16 Apr 2020 04:40:33: 97000000 INFO @ Thu, 16 Apr 2020 04:40:34: 110000000 INFO @ Thu, 16 Apr 2020 04:40:35: 104000000 INFO @ Thu, 16 Apr 2020 04:40:38: 98000000 INFO @ Thu, 16 Apr 2020 04:40:39: 111000000 INFO @ Thu, 16 Apr 2020 04:40:40: 105000000 INFO @ Thu, 16 Apr 2020 04:40:44: 99000000 INFO @ Thu, 16 Apr 2020 04:40:44: 112000000 INFO @ Thu, 16 Apr 2020 04:40:45: 106000000 INFO @ Thu, 16 Apr 2020 04:40:49: 100000000 INFO @ Thu, 16 Apr 2020 04:40:49: 113000000 INFO @ Thu, 16 Apr 2020 04:40:50: 107000000 INFO @ Thu, 16 Apr 2020 04:40:54: 101000000 INFO @ Thu, 16 Apr 2020 04:40:55: 114000000 INFO @ Thu, 16 Apr 2020 04:40:55: 108000000 INFO @ Thu, 16 Apr 2020 04:40:59: 102000000 INFO @ Thu, 16 Apr 2020 04:41:00: 115000000 INFO @ Thu, 16 Apr 2020 04:41:01: 109000000 INFO @ Thu, 16 Apr 2020 04:41:04: 103000000 INFO @ Thu, 16 Apr 2020 04:41:05: 116000000 INFO @ Thu, 16 Apr 2020 04:41:06: 110000000 INFO @ Thu, 16 Apr 2020 04:41:09: 104000000 INFO @ Thu, 16 Apr 2020 04:41:10: 117000000 INFO @ Thu, 16 Apr 2020 04:41:11: 111000000 INFO @ Thu, 16 Apr 2020 04:41:14: 105000000 INFO @ Thu, 16 Apr 2020 04:41:15: 118000000 INFO @ Thu, 16 Apr 2020 04:41:16: 112000000 INFO @ Thu, 16 Apr 2020 04:41:19: 106000000 INFO @ Thu, 16 Apr 2020 04:41:20: 119000000 INFO @ Thu, 16 Apr 2020 04:41:21: 113000000 INFO @ Thu, 16 Apr 2020 04:41:25: 107000000 INFO @ Thu, 16 Apr 2020 04:41:25: 120000000 INFO @ Thu, 16 Apr 2020 04:41:26: 114000000 INFO @ Thu, 16 Apr 2020 04:41:30: 108000000 INFO @ Thu, 16 Apr 2020 04:41:30: 121000000 INFO @ Thu, 16 Apr 2020 04:41:31: 115000000 INFO @ Thu, 16 Apr 2020 04:41:35: 109000000 INFO @ Thu, 16 Apr 2020 04:41:35: 122000000 INFO @ Thu, 16 Apr 2020 04:41:37: 116000000 INFO @ Thu, 16 Apr 2020 04:41:40: 123000000 INFO @ Thu, 16 Apr 2020 04:41:40: 110000000 INFO @ Thu, 16 Apr 2020 04:41:42: 117000000 INFO @ Thu, 16 Apr 2020 04:41:45: 124000000 INFO @ Thu, 16 Apr 2020 04:41:46: 111000000 INFO @ Thu, 16 Apr 2020 04:41:47: 118000000 INFO @ Thu, 16 Apr 2020 04:41:50: 125000000 INFO @ Thu, 16 Apr 2020 04:41:51: 112000000 INFO @ Thu, 16 Apr 2020 04:41:52: 119000000 INFO @ Thu, 16 Apr 2020 04:41:55: 126000000 INFO @ Thu, 16 Apr 2020 04:41:56: 113000000 INFO @ Thu, 16 Apr 2020 04:41:57: 120000000 INFO @ Thu, 16 Apr 2020 04:42:00: 127000000 INFO @ Thu, 16 Apr 2020 04:42:01: 114000000 INFO @ Thu, 16 Apr 2020 04:42:02: 121000000 INFO @ Thu, 16 Apr 2020 04:42:05: 128000000 INFO @ Thu, 16 Apr 2020 04:42:06: 115000000 INFO @ Thu, 16 Apr 2020 04:42:07: 122000000 INFO @ Thu, 16 Apr 2020 04:42:10: 129000000 INFO @ Thu, 16 Apr 2020 04:42:11: 116000000 INFO @ Thu, 16 Apr 2020 04:42:12: 123000000 INFO @ Thu, 16 Apr 2020 04:42:16: 130000000 INFO @ Thu, 16 Apr 2020 04:42:17: 117000000 INFO @ Thu, 16 Apr 2020 04:42:18: 124000000 INFO @ Thu, 16 Apr 2020 04:42:21: 131000000 INFO @ Thu, 16 Apr 2020 04:42:22: 118000000 INFO @ Thu, 16 Apr 2020 04:42:23: 125000000 INFO @ Thu, 16 Apr 2020 04:42:26: 132000000 INFO @ Thu, 16 Apr 2020 04:42:27: 119000000 INFO @ Thu, 16 Apr 2020 04:42:28: 126000000 INFO @ Thu, 16 Apr 2020 04:42:28: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:42:28: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:42:28: #1 total tags in treatment: 64951402 INFO @ Thu, 16 Apr 2020 04:42:28: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:42:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:42:30: #1 tags after filtering in treatment: 33824149 INFO @ Thu, 16 Apr 2020 04:42:30: #1 Redundant rate of treatment: 0.48 INFO @ Thu, 16 Apr 2020 04:42:30: #1 finished! INFO @ Thu, 16 Apr 2020 04:42:30: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:42:30: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:42:32: 120000000 INFO @ Thu, 16 Apr 2020 04:42:32: #2 number of paired peaks: 6749 INFO @ Thu, 16 Apr 2020 04:42:32: start model_add_line... INFO @ Thu, 16 Apr 2020 04:42:33: 127000000 INFO @ Thu, 16 Apr 2020 04:42:33: start X-correlation... INFO @ Thu, 16 Apr 2020 04:42:33: end of X-cor INFO @ Thu, 16 Apr 2020 04:42:33: #2 finished! INFO @ Thu, 16 Apr 2020 04:42:33: #2 predicted fragment length is 170 bps INFO @ Thu, 16 Apr 2020 04:42:33: #2 alternative fragment length(s) may be 170 bps INFO @ Thu, 16 Apr 2020 04:42:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05_model.r INFO @ Thu, 16 Apr 2020 04:42:33: #3 Call peaks... INFO @ Thu, 16 Apr 2020 04:42:33: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 04:42:37: 121000000 INFO @ Thu, 16 Apr 2020 04:42:38: 128000000 INFO @ Thu, 16 Apr 2020 04:42:42: 122000000 INFO @ Thu, 16 Apr 2020 04:42:43: 129000000 INFO @ Thu, 16 Apr 2020 04:42:47: 123000000 INFO @ Thu, 16 Apr 2020 04:42:48: 130000000 INFO @ Thu, 16 Apr 2020 04:42:52: 124000000 INFO @ Thu, 16 Apr 2020 04:42:53: 131000000 INFO @ Thu, 16 Apr 2020 04:42:57: 125000000 INFO @ Thu, 16 Apr 2020 04:42:58: 132000000 INFO @ Thu, 16 Apr 2020 04:43:00: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:43:00: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:43:00: #1 total tags in treatment: 64951402 INFO @ Thu, 16 Apr 2020 04:43:00: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:43:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:43:02: #1 tags after filtering in treatment: 33824149 INFO @ Thu, 16 Apr 2020 04:43:02: #1 Redundant rate of treatment: 0.48 INFO @ Thu, 16 Apr 2020 04:43:02: #1 finished! INFO @ Thu, 16 Apr 2020 04:43:02: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:43:02: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:43:02: 126000000 INFO @ Thu, 16 Apr 2020 04:43:04: #2 number of paired peaks: 6749 INFO @ Thu, 16 Apr 2020 04:43:04: start model_add_line... INFO @ Thu, 16 Apr 2020 04:43:05: start X-correlation... INFO @ Thu, 16 Apr 2020 04:43:05: end of X-cor INFO @ Thu, 16 Apr 2020 04:43:05: #2 finished! INFO @ Thu, 16 Apr 2020 04:43:05: #2 predicted fragment length is 170 bps INFO @ Thu, 16 Apr 2020 04:43:05: #2 alternative fragment length(s) may be 170 bps INFO @ Thu, 16 Apr 2020 04:43:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10_model.r INFO @ Thu, 16 Apr 2020 04:43:05: #3 Call peaks... INFO @ Thu, 16 Apr 2020 04:43:05: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 04:43:07: 127000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 16 Apr 2020 04:43:12: 128000000 INFO @ Thu, 16 Apr 2020 04:43:17: 129000000 INFO @ Thu, 16 Apr 2020 04:43:22: 130000000 INFO @ Thu, 16 Apr 2020 04:43:26: 131000000 INFO @ Thu, 16 Apr 2020 04:43:31: 132000000 INFO @ Thu, 16 Apr 2020 04:43:34: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:43:34: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:43:34: #1 total tags in treatment: 64951402 INFO @ Thu, 16 Apr 2020 04:43:34: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:43:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:43:35: #1 tags after filtering in treatment: 33824149 INFO @ Thu, 16 Apr 2020 04:43:35: #1 Redundant rate of treatment: 0.48 INFO @ Thu, 16 Apr 2020 04:43:35: #1 finished! INFO @ Thu, 16 Apr 2020 04:43:35: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:43:35: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:43:38: #2 number of paired peaks: 6749 INFO @ Thu, 16 Apr 2020 04:43:38: start model_add_line... INFO @ Thu, 16 Apr 2020 04:43:38: start X-correlation... INFO @ Thu, 16 Apr 2020 04:43:38: end of X-cor INFO @ Thu, 16 Apr 2020 04:43:38: #2 finished! INFO @ Thu, 16 Apr 2020 04:43:38: #2 predicted fragment length is 170 bps INFO @ Thu, 16 Apr 2020 04:43:38: #2 alternative fragment length(s) may be 170 bps INFO @ Thu, 16 Apr 2020 04:43:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20_model.r INFO @ Thu, 16 Apr 2020 04:43:38: #3 Call peaks... INFO @ Thu, 16 Apr 2020 04:43:38: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 04:43:45: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 04:44:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05_peaks.xls INFO @ Thu, 16 Apr 2020 04:44:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 04:44:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.05_summits.bed INFO @ Thu, 16 Apr 2020 04:44:14: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (8134 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 04:44:18: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Thu, 16 Apr 2020 04:44:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10_peaks.xls INFO @ Thu, 16 Apr 2020 04:44:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 04:44:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.10_summits.bed INFO @ Thu, 16 Apr 2020 04:44:46: Done! INFO @ Thu, 16 Apr 2020 04:44:49: #3 Call peaks for each chromosome... pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (7750 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 04:45:17: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20_peaks.xls INFO @ Thu, 16 Apr 2020 04:45:17: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 04:45:17: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX5416204/SRX5416204.20_summits.bed INFO @ Thu, 16 Apr 2020 04:45:17: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (7134 records, 4 fields): 8 millis CompletedMACS2peakCalling