Job ID = 5720824 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-15T16:37:26 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:37:26 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T16:37:26 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:08:10 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T17:17:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 87,016,121 reads read : 174,032,242 reads written : 174,032,242 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:34:49 87016121 reads; of these: 87016121 (100.00%) were paired; of these: 7570301 (8.70%) aligned concordantly 0 times 70190667 (80.66%) aligned concordantly exactly 1 time 9255153 (10.64%) aligned concordantly >1 times ---- 7570301 pairs aligned concordantly 0 times; of these: 149359 (1.97%) aligned discordantly 1 time ---- 7420942 pairs aligned 0 times concordantly or discordantly; of these: 14841884 mates make up the pairs; of these: 12164272 (81.96%) aligned 0 times 2207612 (14.87%) aligned exactly 1 time 470000 (3.17%) aligned >1 times 93.01% overall alignment rate Time searching: 01:34:49 Overall time: 01:34:49 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 68 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 28918143 / 79567277 = 0.3634 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:41:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:41:55: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:41:55: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:42:00: 1000000 INFO @ Thu, 16 Apr 2020 04:42:05: 2000000 INFO @ Thu, 16 Apr 2020 04:42:09: 3000000 INFO @ Thu, 16 Apr 2020 04:42:13: 4000000 INFO @ Thu, 16 Apr 2020 04:42:18: 5000000 INFO @ Thu, 16 Apr 2020 04:42:22: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:42:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:42:25: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:42:25: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:42:27: 7000000 INFO @ Thu, 16 Apr 2020 04:42:30: 1000000 INFO @ Thu, 16 Apr 2020 04:42:31: 8000000 INFO @ Thu, 16 Apr 2020 04:42:36: 2000000 INFO @ Thu, 16 Apr 2020 04:42:36: 9000000 INFO @ Thu, 16 Apr 2020 04:42:41: 10000000 INFO @ Thu, 16 Apr 2020 04:42:41: 3000000 INFO @ Thu, 16 Apr 2020 04:42:46: 11000000 INFO @ Thu, 16 Apr 2020 04:42:47: 4000000 INFO @ Thu, 16 Apr 2020 04:42:50: 12000000 INFO @ Thu, 16 Apr 2020 04:42:52: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 04:42:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 04:42:55: #1 read tag files... INFO @ Thu, 16 Apr 2020 04:42:55: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 04:42:55: 13000000 INFO @ Thu, 16 Apr 2020 04:42:57: 6000000 INFO @ Thu, 16 Apr 2020 04:43:00: 1000000 INFO @ Thu, 16 Apr 2020 04:43:00: 14000000 INFO @ Thu, 16 Apr 2020 04:43:02: 7000000 INFO @ Thu, 16 Apr 2020 04:43:05: 15000000 INFO @ Thu, 16 Apr 2020 04:43:05: 2000000 INFO @ Thu, 16 Apr 2020 04:43:08: 8000000 INFO @ Thu, 16 Apr 2020 04:43:10: 16000000 INFO @ Thu, 16 Apr 2020 04:43:10: 3000000 INFO @ Thu, 16 Apr 2020 04:43:13: 9000000 INFO @ Thu, 16 Apr 2020 04:43:14: 17000000 INFO @ Thu, 16 Apr 2020 04:43:15: 4000000 INFO @ Thu, 16 Apr 2020 04:43:18: 10000000 INFO @ Thu, 16 Apr 2020 04:43:19: 18000000 INFO @ Thu, 16 Apr 2020 04:43:20: 5000000 INFO @ Thu, 16 Apr 2020 04:43:23: 11000000 INFO @ Thu, 16 Apr 2020 04:43:24: 19000000 INFO @ Thu, 16 Apr 2020 04:43:25: 6000000 INFO @ Thu, 16 Apr 2020 04:43:29: 12000000 INFO @ Thu, 16 Apr 2020 04:43:29: 20000000 INFO @ Thu, 16 Apr 2020 04:43:30: 7000000 INFO @ Thu, 16 Apr 2020 04:43:34: 21000000 INFO @ Thu, 16 Apr 2020 04:43:34: 13000000 INFO @ Thu, 16 Apr 2020 04:43:35: 8000000 INFO @ Thu, 16 Apr 2020 04:43:38: 22000000 INFO @ Thu, 16 Apr 2020 04:43:39: 14000000 INFO @ Thu, 16 Apr 2020 04:43:40: 9000000 INFO @ Thu, 16 Apr 2020 04:43:43: 23000000 INFO @ Thu, 16 Apr 2020 04:43:45: 15000000 INFO @ Thu, 16 Apr 2020 04:43:45: 10000000 INFO @ Thu, 16 Apr 2020 04:43:48: 24000000 INFO @ Thu, 16 Apr 2020 04:43:50: 16000000 INFO @ Thu, 16 Apr 2020 04:43:50: 11000000 INFO @ Thu, 16 Apr 2020 04:43:53: 25000000 INFO @ Thu, 16 Apr 2020 04:43:55: 12000000 INFO @ Thu, 16 Apr 2020 04:43:55: 17000000 INFO @ Thu, 16 Apr 2020 04:43:58: 26000000 INFO @ Thu, 16 Apr 2020 04:44:00: 13000000 INFO @ Thu, 16 Apr 2020 04:44:00: 18000000 INFO @ Thu, 16 Apr 2020 04:44:03: 27000000 INFO @ Thu, 16 Apr 2020 04:44:05: 14000000 INFO @ Thu, 16 Apr 2020 04:44:06: 19000000 INFO @ Thu, 16 Apr 2020 04:44:08: 28000000 INFO @ Thu, 16 Apr 2020 04:44:10: 15000000 INFO @ Thu, 16 Apr 2020 04:44:11: 20000000 INFO @ Thu, 16 Apr 2020 04:44:12: 29000000 INFO @ Thu, 16 Apr 2020 04:44:14: 16000000 INFO @ Thu, 16 Apr 2020 04:44:16: 21000000 INFO @ Thu, 16 Apr 2020 04:44:17: 30000000 INFO @ Thu, 16 Apr 2020 04:44:19: 17000000 INFO @ Thu, 16 Apr 2020 04:44:21: 22000000 INFO @ Thu, 16 Apr 2020 04:44:22: 31000000 INFO @ Thu, 16 Apr 2020 04:44:24: 18000000 INFO @ Thu, 16 Apr 2020 04:44:27: 23000000 INFO @ Thu, 16 Apr 2020 04:44:27: 32000000 INFO @ Thu, 16 Apr 2020 04:44:29: 19000000 INFO @ Thu, 16 Apr 2020 04:44:32: 33000000 INFO @ Thu, 16 Apr 2020 04:44:32: 24000000 INFO @ Thu, 16 Apr 2020 04:44:34: 20000000 INFO @ Thu, 16 Apr 2020 04:44:36: 34000000 INFO @ Thu, 16 Apr 2020 04:44:37: 25000000 INFO @ Thu, 16 Apr 2020 04:44:39: 21000000 INFO @ Thu, 16 Apr 2020 04:44:41: 35000000 INFO @ Thu, 16 Apr 2020 04:44:43: 26000000 INFO @ Thu, 16 Apr 2020 04:44:43: 22000000 INFO @ Thu, 16 Apr 2020 04:44:46: 36000000 INFO @ Thu, 16 Apr 2020 04:44:48: 27000000 INFO @ Thu, 16 Apr 2020 04:44:48: 23000000 INFO @ Thu, 16 Apr 2020 04:44:51: 37000000 INFO @ Thu, 16 Apr 2020 04:44:53: 28000000 INFO @ Thu, 16 Apr 2020 04:44:53: 24000000 INFO @ Thu, 16 Apr 2020 04:44:55: 38000000 INFO @ Thu, 16 Apr 2020 04:44:58: 25000000 INFO @ Thu, 16 Apr 2020 04:44:58: 29000000 INFO @ Thu, 16 Apr 2020 04:45:00: 39000000 INFO @ Thu, 16 Apr 2020 04:45:03: 26000000 INFO @ Thu, 16 Apr 2020 04:45:04: 30000000 INFO @ Thu, 16 Apr 2020 04:45:05: 40000000 INFO @ Thu, 16 Apr 2020 04:45:08: 27000000 INFO @ Thu, 16 Apr 2020 04:45:09: 31000000 INFO @ Thu, 16 Apr 2020 04:45:10: 41000000 INFO @ Thu, 16 Apr 2020 04:45:13: 28000000 INFO @ Thu, 16 Apr 2020 04:45:14: 32000000 INFO @ Thu, 16 Apr 2020 04:45:15: 42000000 INFO @ Thu, 16 Apr 2020 04:45:18: 29000000 INFO @ Thu, 16 Apr 2020 04:45:19: 33000000 INFO @ Thu, 16 Apr 2020 04:45:20: 43000000 INFO @ Thu, 16 Apr 2020 04:45:23: 30000000 INFO @ Thu, 16 Apr 2020 04:45:25: 44000000 INFO @ Thu, 16 Apr 2020 04:45:25: 34000000 INFO @ Thu, 16 Apr 2020 04:45:28: 31000000 INFO @ Thu, 16 Apr 2020 04:45:29: 45000000 INFO @ Thu, 16 Apr 2020 04:45:30: 35000000 INFO @ Thu, 16 Apr 2020 04:45:33: 32000000 INFO @ Thu, 16 Apr 2020 04:45:34: 46000000 INFO @ Thu, 16 Apr 2020 04:45:35: 36000000 INFO @ Thu, 16 Apr 2020 04:45:38: 33000000 INFO @ Thu, 16 Apr 2020 04:45:39: 47000000 INFO @ Thu, 16 Apr 2020 04:45:40: 37000000 INFO @ Thu, 16 Apr 2020 04:45:43: 34000000 INFO @ Thu, 16 Apr 2020 04:45:44: 48000000 INFO @ Thu, 16 Apr 2020 04:45:46: 38000000 INFO @ Thu, 16 Apr 2020 04:45:48: 35000000 INFO @ Thu, 16 Apr 2020 04:45:49: 49000000 INFO @ Thu, 16 Apr 2020 04:45:51: 39000000 INFO @ Thu, 16 Apr 2020 04:45:52: 36000000 INFO @ Thu, 16 Apr 2020 04:45:53: 50000000 INFO @ Thu, 16 Apr 2020 04:45:56: 40000000 INFO @ Thu, 16 Apr 2020 04:45:57: 37000000 INFO @ Thu, 16 Apr 2020 04:45:58: 51000000 INFO @ Thu, 16 Apr 2020 04:46:02: 41000000 INFO @ Thu, 16 Apr 2020 04:46:02: 38000000 INFO @ Thu, 16 Apr 2020 04:46:03: 52000000 INFO @ Thu, 16 Apr 2020 04:46:07: 39000000 INFO @ Thu, 16 Apr 2020 04:46:07: 42000000 INFO @ Thu, 16 Apr 2020 04:46:08: 53000000 INFO @ Thu, 16 Apr 2020 04:46:12: 40000000 INFO @ Thu, 16 Apr 2020 04:46:12: 43000000 INFO @ Thu, 16 Apr 2020 04:46:12: 54000000 INFO @ Thu, 16 Apr 2020 04:46:17: 41000000 INFO @ Thu, 16 Apr 2020 04:46:17: 55000000 INFO @ Thu, 16 Apr 2020 04:46:18: 44000000 INFO @ Thu, 16 Apr 2020 04:46:22: 42000000 INFO @ Thu, 16 Apr 2020 04:46:22: 56000000 INFO @ Thu, 16 Apr 2020 04:46:23: 45000000 INFO @ Thu, 16 Apr 2020 04:46:26: 43000000 INFO @ Thu, 16 Apr 2020 04:46:27: 57000000 INFO @ Thu, 16 Apr 2020 04:46:28: 46000000 INFO @ Thu, 16 Apr 2020 04:46:31: 44000000 INFO @ Thu, 16 Apr 2020 04:46:31: 58000000 INFO @ Thu, 16 Apr 2020 04:46:34: 47000000 INFO @ Thu, 16 Apr 2020 04:46:36: 59000000 INFO @ Thu, 16 Apr 2020 04:46:36: 45000000 INFO @ Thu, 16 Apr 2020 04:46:39: 48000000 INFO @ Thu, 16 Apr 2020 04:46:41: 60000000 INFO @ Thu, 16 Apr 2020 04:46:41: 46000000 INFO @ Thu, 16 Apr 2020 04:46:44: 49000000 INFO @ Thu, 16 Apr 2020 04:46:45: 61000000 INFO @ Thu, 16 Apr 2020 04:46:46: 47000000 INFO @ Thu, 16 Apr 2020 04:46:49: 50000000 INFO @ Thu, 16 Apr 2020 04:46:50: 62000000 INFO @ Thu, 16 Apr 2020 04:46:51: 48000000 INFO @ Thu, 16 Apr 2020 04:46:54: 51000000 INFO @ Thu, 16 Apr 2020 04:46:55: 63000000 INFO @ Thu, 16 Apr 2020 04:46:55: 49000000 INFO @ Thu, 16 Apr 2020 04:47:00: 64000000 INFO @ Thu, 16 Apr 2020 04:47:00: 52000000 INFO @ Thu, 16 Apr 2020 04:47:00: 50000000 INFO @ Thu, 16 Apr 2020 04:47:04: 65000000 INFO @ Thu, 16 Apr 2020 04:47:05: 53000000 INFO @ Thu, 16 Apr 2020 04:47:05: 51000000 INFO @ Thu, 16 Apr 2020 04:47:09: 66000000 INFO @ Thu, 16 Apr 2020 04:47:10: 52000000 INFO @ Thu, 16 Apr 2020 04:47:10: 54000000 INFO @ Thu, 16 Apr 2020 04:47:14: 67000000 INFO @ Thu, 16 Apr 2020 04:47:15: 53000000 INFO @ Thu, 16 Apr 2020 04:47:16: 55000000 INFO @ Thu, 16 Apr 2020 04:47:19: 68000000 INFO @ Thu, 16 Apr 2020 04:47:20: 54000000 INFO @ Thu, 16 Apr 2020 04:47:21: 56000000 INFO @ Thu, 16 Apr 2020 04:47:24: 69000000 INFO @ Thu, 16 Apr 2020 04:47:25: 55000000 INFO @ Thu, 16 Apr 2020 04:47:26: 57000000 INFO @ Thu, 16 Apr 2020 04:47:29: 70000000 INFO @ Thu, 16 Apr 2020 04:47:30: 56000000 INFO @ Thu, 16 Apr 2020 04:47:31: 58000000 INFO @ Thu, 16 Apr 2020 04:47:34: 71000000 INFO @ Thu, 16 Apr 2020 04:47:35: 57000000 INFO @ Thu, 16 Apr 2020 04:47:37: 59000000 INFO @ Thu, 16 Apr 2020 04:47:39: 72000000 INFO @ Thu, 16 Apr 2020 04:47:40: 58000000 INFO @ Thu, 16 Apr 2020 04:47:42: 60000000 INFO @ Thu, 16 Apr 2020 04:47:43: 73000000 INFO @ Thu, 16 Apr 2020 04:47:45: 59000000 INFO @ Thu, 16 Apr 2020 04:47:47: 61000000 INFO @ Thu, 16 Apr 2020 04:47:48: 74000000 INFO @ Thu, 16 Apr 2020 04:47:50: 60000000 INFO @ Thu, 16 Apr 2020 04:47:52: 62000000 INFO @ Thu, 16 Apr 2020 04:47:53: 75000000 INFO @ Thu, 16 Apr 2020 04:47:54: 61000000 INFO @ Thu, 16 Apr 2020 04:47:57: 63000000 INFO @ Thu, 16 Apr 2020 04:47:58: 76000000 INFO @ Thu, 16 Apr 2020 04:47:59: 62000000 INFO @ Thu, 16 Apr 2020 04:48:03: 77000000 INFO @ Thu, 16 Apr 2020 04:48:03: 64000000 INFO @ Thu, 16 Apr 2020 04:48:04: 63000000 INFO @ Thu, 16 Apr 2020 04:48:07: 78000000 INFO @ Thu, 16 Apr 2020 04:48:08: 65000000 INFO @ Thu, 16 Apr 2020 04:48:09: 64000000 INFO @ Thu, 16 Apr 2020 04:48:12: 79000000 INFO @ Thu, 16 Apr 2020 04:48:13: 66000000 INFO @ Thu, 16 Apr 2020 04:48:14: 65000000 INFO @ Thu, 16 Apr 2020 04:48:17: 80000000 INFO @ Thu, 16 Apr 2020 04:48:18: 67000000 INFO @ Thu, 16 Apr 2020 04:48:18: 66000000 INFO @ Thu, 16 Apr 2020 04:48:22: 81000000 INFO @ Thu, 16 Apr 2020 04:48:23: 67000000 INFO @ Thu, 16 Apr 2020 04:48:23: 68000000 INFO @ Thu, 16 Apr 2020 04:48:27: 82000000 INFO @ Thu, 16 Apr 2020 04:48:28: 68000000 INFO @ Thu, 16 Apr 2020 04:48:29: 69000000 INFO @ Thu, 16 Apr 2020 04:48:32: 83000000 INFO @ Thu, 16 Apr 2020 04:48:33: 69000000 INFO @ Thu, 16 Apr 2020 04:48:34: 70000000 INFO @ Thu, 16 Apr 2020 04:48:36: 84000000 INFO @ Thu, 16 Apr 2020 04:48:38: 70000000 INFO @ Thu, 16 Apr 2020 04:48:39: 71000000 INFO @ Thu, 16 Apr 2020 04:48:41: 85000000 INFO @ Thu, 16 Apr 2020 04:48:42: 71000000 INFO @ Thu, 16 Apr 2020 04:48:45: 72000000 INFO @ Thu, 16 Apr 2020 04:48:46: 86000000 INFO @ Thu, 16 Apr 2020 04:48:47: 72000000 INFO @ Thu, 16 Apr 2020 04:48:50: 73000000 INFO @ Thu, 16 Apr 2020 04:48:51: 87000000 INFO @ Thu, 16 Apr 2020 04:48:52: 73000000 INFO @ Thu, 16 Apr 2020 04:48:55: 74000000 INFO @ Thu, 16 Apr 2020 04:48:56: 88000000 INFO @ Thu, 16 Apr 2020 04:48:57: 74000000 INFO @ Thu, 16 Apr 2020 04:49:00: 75000000 INFO @ Thu, 16 Apr 2020 04:49:00: 89000000 INFO @ Thu, 16 Apr 2020 04:49:02: 75000000 INFO @ Thu, 16 Apr 2020 04:49:05: 90000000 INFO @ Thu, 16 Apr 2020 04:49:05: 76000000 INFO @ Thu, 16 Apr 2020 04:49:06: 76000000 INFO @ Thu, 16 Apr 2020 04:49:10: 91000000 INFO @ Thu, 16 Apr 2020 04:49:11: 77000000 INFO @ Thu, 16 Apr 2020 04:49:11: 77000000 INFO @ Thu, 16 Apr 2020 04:49:15: 92000000 INFO @ Thu, 16 Apr 2020 04:49:16: 78000000 INFO @ Thu, 16 Apr 2020 04:49:17: 78000000 INFO @ Thu, 16 Apr 2020 04:49:19: 93000000 INFO @ Thu, 16 Apr 2020 04:49:21: 79000000 INFO @ Thu, 16 Apr 2020 04:49:22: 79000000 INFO @ Thu, 16 Apr 2020 04:49:24: 94000000 INFO @ Thu, 16 Apr 2020 04:49:26: 80000000 INFO @ Thu, 16 Apr 2020 04:49:27: 80000000 INFO @ Thu, 16 Apr 2020 04:49:29: 95000000 INFO @ Thu, 16 Apr 2020 04:49:32: 81000000 INFO @ Thu, 16 Apr 2020 04:49:32: 81000000 INFO @ Thu, 16 Apr 2020 04:49:34: 96000000 INFO @ Thu, 16 Apr 2020 04:49:37: 82000000 INFO @ Thu, 16 Apr 2020 04:49:38: 82000000 INFO @ Thu, 16 Apr 2020 04:49:39: 97000000 INFO @ Thu, 16 Apr 2020 04:49:43: 83000000 INFO @ Thu, 16 Apr 2020 04:49:43: 98000000 INFO @ Thu, 16 Apr 2020 04:49:43: 83000000 INFO @ Thu, 16 Apr 2020 04:49:48: 84000000 INFO @ Thu, 16 Apr 2020 04:49:48: 99000000 INFO @ Thu, 16 Apr 2020 04:49:49: 84000000 INFO @ Thu, 16 Apr 2020 04:49:53: 100000000 INFO @ Thu, 16 Apr 2020 04:49:53: 85000000 INFO @ Thu, 16 Apr 2020 04:49:54: 85000000 INFO @ Thu, 16 Apr 2020 04:49:58: 101000000 INFO @ Thu, 16 Apr 2020 04:49:59: 86000000 INFO @ Thu, 16 Apr 2020 04:49:59: 86000000 INFO @ Thu, 16 Apr 2020 04:50:03: 102000000 INFO @ Thu, 16 Apr 2020 04:50:04: 87000000 INFO @ Thu, 16 Apr 2020 04:50:05: 87000000 INFO @ Thu, 16 Apr 2020 04:50:08: 103000000 INFO @ Thu, 16 Apr 2020 04:50:09: 88000000 INFO @ Thu, 16 Apr 2020 04:50:10: 88000000 INFO @ Thu, 16 Apr 2020 04:50:12: 104000000 INFO @ Thu, 16 Apr 2020 04:50:13: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:50:13: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:50:13: #1 total tags in treatment: 50576947 INFO @ Thu, 16 Apr 2020 04:50:13: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:50:13: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:50:14: #1 tags after filtering in treatment: 40814326 INFO @ Thu, 16 Apr 2020 04:50:14: #1 Redundant rate of treatment: 0.19 INFO @ Thu, 16 Apr 2020 04:50:14: #1 finished! INFO @ Thu, 16 Apr 2020 04:50:14: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:50:14: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:50:15: 89000000 INFO @ Thu, 16 Apr 2020 04:50:15: 89000000 INFO @ Thu, 16 Apr 2020 04:50:17: #2 number of paired peaks: 66 WARNING @ Thu, 16 Apr 2020 04:50:17: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 04:50:17: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 04:50:20: 90000000 INFO @ Thu, 16 Apr 2020 04:50:21: 90000000 INFO @ Thu, 16 Apr 2020 04:50:25: 91000000 INFO @ Thu, 16 Apr 2020 04:50:26: 91000000 INFO @ Thu, 16 Apr 2020 04:50:31: 92000000 INFO @ Thu, 16 Apr 2020 04:50:31: 92000000 INFO @ Thu, 16 Apr 2020 04:50:36: 93000000 INFO @ Thu, 16 Apr 2020 04:50:37: 93000000 INFO @ Thu, 16 Apr 2020 04:50:41: 94000000 INFO @ Thu, 16 Apr 2020 04:50:42: 94000000 INFO @ Thu, 16 Apr 2020 04:50:47: 95000000 INFO @ Thu, 16 Apr 2020 04:50:47: 95000000 INFO @ Thu, 16 Apr 2020 04:50:52: 96000000 INFO @ Thu, 16 Apr 2020 04:50:53: 96000000 INFO @ Thu, 16 Apr 2020 04:50:58: 97000000 INFO @ Thu, 16 Apr 2020 04:50:58: 97000000 INFO @ Thu, 16 Apr 2020 04:51:03: 98000000 INFO @ Thu, 16 Apr 2020 04:51:03: 98000000 INFO @ Thu, 16 Apr 2020 04:51:08: 99000000 INFO @ Thu, 16 Apr 2020 04:51:09: 99000000 INFO @ Thu, 16 Apr 2020 04:51:13: 100000000 INFO @ Thu, 16 Apr 2020 04:51:14: 100000000 INFO @ Thu, 16 Apr 2020 04:51:19: 101000000 INFO @ Thu, 16 Apr 2020 04:51:19: 101000000 INFO @ Thu, 16 Apr 2020 04:51:24: 102000000 INFO @ Thu, 16 Apr 2020 04:51:25: 102000000 INFO @ Thu, 16 Apr 2020 04:51:29: 103000000 INFO @ Thu, 16 Apr 2020 04:51:30: 103000000 INFO @ Thu, 16 Apr 2020 04:51:34: 104000000 INFO @ Thu, 16 Apr 2020 04:51:35: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:51:35: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:51:35: #1 total tags in treatment: 50576947 INFO @ Thu, 16 Apr 2020 04:51:35: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:51:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:51:35: 104000000 INFO @ Thu, 16 Apr 2020 04:51:36: #1 tag size is determined as 49 bps INFO @ Thu, 16 Apr 2020 04:51:36: #1 tag size = 49 INFO @ Thu, 16 Apr 2020 04:51:36: #1 total tags in treatment: 50576947 INFO @ Thu, 16 Apr 2020 04:51:36: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 04:51:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 04:51:36: #1 tags after filtering in treatment: 40814326 INFO @ Thu, 16 Apr 2020 04:51:36: #1 Redundant rate of treatment: 0.19 INFO @ Thu, 16 Apr 2020 04:51:36: #1 finished! INFO @ Thu, 16 Apr 2020 04:51:36: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:51:36: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:51:37: #1 tags after filtering in treatment: 40814326 INFO @ Thu, 16 Apr 2020 04:51:37: #1 Redundant rate of treatment: 0.19 INFO @ Thu, 16 Apr 2020 04:51:37: #1 finished! INFO @ Thu, 16 Apr 2020 04:51:37: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 04:51:37: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 04:51:38: #2 number of paired peaks: 66 WARNING @ Thu, 16 Apr 2020 04:51:38: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 04:51:38: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 04:51:39: #2 number of paired peaks: 66 WARNING @ Thu, 16 Apr 2020 04:51:39: Too few paired peaks (66) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Thu, 16 Apr 2020 04:51:39: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX5416199/SRX5416199.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。