Job ID = 12265257 SRX = SRX4664636 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 38720337 spots for SRR7813063/SRR7813063.sra Written 38720337 spots for SRR7813063/SRR7813063.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265735 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:28:17 38720337 reads; of these: 38720337 (100.00%) were paired; of these: 9899816 (25.57%) aligned concordantly 0 times 13392584 (34.59%) aligned concordantly exactly 1 time 15427937 (39.84%) aligned concordantly >1 times ---- 9899816 pairs aligned concordantly 0 times; of these: 3184966 (32.17%) aligned discordantly 1 time ---- 6714850 pairs aligned 0 times concordantly or discordantly; of these: 13429700 mates make up the pairs; of these: 8131308 (60.55%) aligned 0 times 1179858 (8.79%) aligned exactly 1 time 4118534 (30.67%) aligned >1 times 89.50% overall alignment rate Time searching: 01:28:17 Overall time: 01:28:17 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10325356 / 31540589 = 0.3274 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:11:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:11:15: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:11:15: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:11:21: 1000000 INFO @ Sat, 03 Apr 2021 08:11:27: 2000000 INFO @ Sat, 03 Apr 2021 08:11:33: 3000000 INFO @ Sat, 03 Apr 2021 08:11:40: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:11:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:11:44: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:11:44: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:11:46: 5000000 INFO @ Sat, 03 Apr 2021 08:11:51: 1000000 INFO @ Sat, 03 Apr 2021 08:11:52: 6000000 INFO @ Sat, 03 Apr 2021 08:11:58: 2000000 INFO @ Sat, 03 Apr 2021 08:11:58: 7000000 INFO @ Sat, 03 Apr 2021 08:12:04: 3000000 INFO @ Sat, 03 Apr 2021 08:12:05: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 08:12:11: 4000000 INFO @ Sat, 03 Apr 2021 08:12:12: 9000000 INFO @ Sat, 03 Apr 2021 08:12:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 08:12:14: #1 read tag files... INFO @ Sat, 03 Apr 2021 08:12:14: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 08:12:18: 10000000 INFO @ Sat, 03 Apr 2021 08:12:18: 5000000 INFO @ Sat, 03 Apr 2021 08:12:21: 1000000 INFO @ Sat, 03 Apr 2021 08:12:24: 11000000 INFO @ Sat, 03 Apr 2021 08:12:25: 6000000 INFO @ Sat, 03 Apr 2021 08:12:28: 2000000 INFO @ Sat, 03 Apr 2021 08:12:30: 12000000 INFO @ Sat, 03 Apr 2021 08:12:32: 7000000 INFO @ Sat, 03 Apr 2021 08:12:36: 3000000 INFO @ Sat, 03 Apr 2021 08:12:37: 13000000 INFO @ Sat, 03 Apr 2021 08:12:39: 8000000 INFO @ Sat, 03 Apr 2021 08:12:43: 4000000 INFO @ Sat, 03 Apr 2021 08:12:43: 14000000 INFO @ Sat, 03 Apr 2021 08:12:47: 9000000 INFO @ Sat, 03 Apr 2021 08:12:50: 5000000 INFO @ Sat, 03 Apr 2021 08:12:51: 15000000 INFO @ Sat, 03 Apr 2021 08:12:54: 10000000 INFO @ Sat, 03 Apr 2021 08:12:57: 6000000 INFO @ Sat, 03 Apr 2021 08:12:59: 16000000 INFO @ Sat, 03 Apr 2021 08:13:01: 11000000 INFO @ Sat, 03 Apr 2021 08:13:05: 7000000 INFO @ Sat, 03 Apr 2021 08:13:07: 17000000 INFO @ Sat, 03 Apr 2021 08:13:08: 12000000 INFO @ Sat, 03 Apr 2021 08:13:12: 8000000 INFO @ Sat, 03 Apr 2021 08:13:13: 18000000 INFO @ Sat, 03 Apr 2021 08:13:15: 13000000 INFO @ Sat, 03 Apr 2021 08:13:19: 9000000 INFO @ Sat, 03 Apr 2021 08:13:20: 19000000 INFO @ Sat, 03 Apr 2021 08:13:22: 14000000 INFO @ Sat, 03 Apr 2021 08:13:26: 20000000 INFO @ Sat, 03 Apr 2021 08:13:26: 10000000 INFO @ Sat, 03 Apr 2021 08:13:30: 15000000 INFO @ Sat, 03 Apr 2021 08:13:34: 11000000 INFO @ Sat, 03 Apr 2021 08:13:34: 21000000 INFO @ Sat, 03 Apr 2021 08:13:37: 16000000 INFO @ Sat, 03 Apr 2021 08:13:41: 12000000 INFO @ Sat, 03 Apr 2021 08:13:43: 22000000 INFO @ Sat, 03 Apr 2021 08:13:44: 17000000 INFO @ Sat, 03 Apr 2021 08:13:49: 13000000 INFO @ Sat, 03 Apr 2021 08:13:51: 18000000 INFO @ Sat, 03 Apr 2021 08:13:51: 23000000 INFO @ Sat, 03 Apr 2021 08:13:56: 14000000 INFO @ Sat, 03 Apr 2021 08:13:58: 19000000 INFO @ Sat, 03 Apr 2021 08:13:58: 24000000 INFO @ Sat, 03 Apr 2021 08:14:03: 15000000 INFO @ Sat, 03 Apr 2021 08:14:05: 25000000 INFO @ Sat, 03 Apr 2021 08:14:05: 20000000 INFO @ Sat, 03 Apr 2021 08:14:09: 16000000 INFO @ Sat, 03 Apr 2021 08:14:11: 26000000 INFO @ Sat, 03 Apr 2021 08:14:12: 21000000 INFO @ Sat, 03 Apr 2021 08:14:16: 17000000 INFO @ Sat, 03 Apr 2021 08:14:19: 22000000 INFO @ Sat, 03 Apr 2021 08:14:19: 27000000 INFO @ Sat, 03 Apr 2021 08:14:23: 18000000 INFO @ Sat, 03 Apr 2021 08:14:26: 23000000 INFO @ Sat, 03 Apr 2021 08:14:29: 28000000 INFO @ Sat, 03 Apr 2021 08:14:30: 19000000 INFO @ Sat, 03 Apr 2021 08:14:33: 24000000 INFO @ Sat, 03 Apr 2021 08:14:37: 20000000 INFO @ Sat, 03 Apr 2021 08:14:38: 29000000 INFO @ Sat, 03 Apr 2021 08:14:40: 25000000 INFO @ Sat, 03 Apr 2021 08:14:45: 21000000 INFO @ Sat, 03 Apr 2021 08:14:47: 30000000 INFO @ Sat, 03 Apr 2021 08:14:48: 26000000 INFO @ Sat, 03 Apr 2021 08:14:52: 22000000 INFO @ Sat, 03 Apr 2021 08:14:55: 27000000 INFO @ Sat, 03 Apr 2021 08:14:56: 31000000 INFO @ Sat, 03 Apr 2021 08:14:59: 23000000 INFO @ Sat, 03 Apr 2021 08:15:02: 28000000 INFO @ Sat, 03 Apr 2021 08:15:04: 32000000 INFO @ Sat, 03 Apr 2021 08:15:06: 24000000 INFO @ Sat, 03 Apr 2021 08:15:09: 29000000 INFO @ Sat, 03 Apr 2021 08:15:12: 33000000 INFO @ Sat, 03 Apr 2021 08:15:14: 25000000 INFO @ Sat, 03 Apr 2021 08:15:16: 30000000 INFO @ Sat, 03 Apr 2021 08:15:20: 34000000 INFO @ Sat, 03 Apr 2021 08:15:21: 26000000 INFO @ Sat, 03 Apr 2021 08:15:23: 31000000 INFO @ Sat, 03 Apr 2021 08:15:28: 35000000 INFO @ Sat, 03 Apr 2021 08:15:28: 27000000 INFO @ Sat, 03 Apr 2021 08:15:29: 32000000 INFO @ Sat, 03 Apr 2021 08:15:35: 28000000 INFO @ Sat, 03 Apr 2021 08:15:35: 33000000 INFO @ Sat, 03 Apr 2021 08:15:36: 36000000 INFO @ Sat, 03 Apr 2021 08:15:42: 34000000 INFO @ Sat, 03 Apr 2021 08:15:42: 29000000 INFO @ Sat, 03 Apr 2021 08:15:44: 37000000 INFO @ Sat, 03 Apr 2021 08:15:48: 35000000 INFO @ Sat, 03 Apr 2021 08:15:49: 30000000 INFO @ Sat, 03 Apr 2021 08:15:53: 38000000 INFO @ Sat, 03 Apr 2021 08:15:55: 36000000 INFO @ Sat, 03 Apr 2021 08:15:57: 31000000 INFO @ Sat, 03 Apr 2021 08:16:01: 39000000 INFO @ Sat, 03 Apr 2021 08:16:01: 37000000 INFO @ Sat, 03 Apr 2021 08:16:03: 32000000 INFO @ Sat, 03 Apr 2021 08:16:08: 38000000 INFO @ Sat, 03 Apr 2021 08:16:10: 40000000 INFO @ Sat, 03 Apr 2021 08:16:10: 33000000 INFO @ Sat, 03 Apr 2021 08:16:15: 39000000 INFO @ Sat, 03 Apr 2021 08:16:16: 34000000 INFO @ Sat, 03 Apr 2021 08:16:18: 41000000 INFO @ Sat, 03 Apr 2021 08:16:21: 40000000 INFO @ Sat, 03 Apr 2021 08:16:23: 35000000 INFO @ Sat, 03 Apr 2021 08:16:27: 42000000 INFO @ Sat, 03 Apr 2021 08:16:28: 41000000 INFO @ Sat, 03 Apr 2021 08:16:30: 36000000 INFO @ Sat, 03 Apr 2021 08:16:35: 42000000 INFO @ Sat, 03 Apr 2021 08:16:36: 43000000 INFO @ Sat, 03 Apr 2021 08:16:36: 37000000 INFO @ Sat, 03 Apr 2021 08:16:42: 43000000 INFO @ Sat, 03 Apr 2021 08:16:43: 38000000 INFO @ Sat, 03 Apr 2021 08:16:44: 44000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 08:16:49: 44000000 INFO @ Sat, 03 Apr 2021 08:16:50: 39000000 INFO @ Sat, 03 Apr 2021 08:16:53: 45000000 INFO @ Sat, 03 Apr 2021 08:16:55: 45000000 INFO @ Sat, 03 Apr 2021 08:16:57: 40000000 INFO @ Sat, 03 Apr 2021 08:17:02: 46000000 INFO @ Sat, 03 Apr 2021 08:17:02: 46000000 INFO @ Sat, 03 Apr 2021 08:17:04: 41000000 INFO @ Sat, 03 Apr 2021 08:17:09: 47000000 INFO @ Sat, 03 Apr 2021 08:17:10: 47000000 INFO @ Sat, 03 Apr 2021 08:17:11: 42000000 INFO @ Sat, 03 Apr 2021 08:17:16: 48000000 INFO @ Sat, 03 Apr 2021 08:17:18: 43000000 INFO @ Sat, 03 Apr 2021 08:17:19: 48000000 INFO @ Sat, 03 Apr 2021 08:17:21: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 08:17:21: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 08:17:21: #1 total tags in treatment: 18929762 INFO @ Sat, 03 Apr 2021 08:17:21: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:17:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:17:21: #1 tags after filtering in treatment: 14042513 INFO @ Sat, 03 Apr 2021 08:17:21: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 08:17:21: #1 finished! INFO @ Sat, 03 Apr 2021 08:17:21: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:17:21: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:17:22: #2 number of paired peaks: 554 WARNING @ Sat, 03 Apr 2021 08:17:22: Fewer paired peaks (554) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 554 pairs to build model! INFO @ Sat, 03 Apr 2021 08:17:22: start model_add_line... INFO @ Sat, 03 Apr 2021 08:17:22: start X-correlation... INFO @ Sat, 03 Apr 2021 08:17:23: end of X-cor INFO @ Sat, 03 Apr 2021 08:17:23: #2 finished! INFO @ Sat, 03 Apr 2021 08:17:23: #2 predicted fragment length is 64 bps INFO @ Sat, 03 Apr 2021 08:17:23: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sat, 03 Apr 2021 08:17:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10_model.r WARNING @ Sat, 03 Apr 2021 08:17:23: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:17:23: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sat, 03 Apr 2021 08:17:23: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:17:23: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:17:23: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:17:24: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 08:17:24: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 08:17:24: #1 total tags in treatment: 18929762 INFO @ Sat, 03 Apr 2021 08:17:24: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:17:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:17:24: #1 tags after filtering in treatment: 14042513 INFO @ Sat, 03 Apr 2021 08:17:24: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 08:17:24: #1 finished! INFO @ Sat, 03 Apr 2021 08:17:24: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:17:24: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:17:25: #2 number of paired peaks: 554 WARNING @ Sat, 03 Apr 2021 08:17:25: Fewer paired peaks (554) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 554 pairs to build model! INFO @ Sat, 03 Apr 2021 08:17:25: start model_add_line... INFO @ Sat, 03 Apr 2021 08:17:25: 44000000 INFO @ Sat, 03 Apr 2021 08:17:26: start X-correlation... INFO @ Sat, 03 Apr 2021 08:17:26: end of X-cor INFO @ Sat, 03 Apr 2021 08:17:26: #2 finished! INFO @ Sat, 03 Apr 2021 08:17:26: #2 predicted fragment length is 64 bps INFO @ Sat, 03 Apr 2021 08:17:26: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sat, 03 Apr 2021 08:17:26: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05_model.r WARNING @ Sat, 03 Apr 2021 08:17:26: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:17:26: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sat, 03 Apr 2021 08:17:26: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:17:26: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:17:26: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:17:32: 45000000 INFO @ Sat, 03 Apr 2021 08:17:39: 46000000 INFO @ Sat, 03 Apr 2021 08:17:45: 47000000 INFO @ Sat, 03 Apr 2021 08:17:52: 48000000 INFO @ Sat, 03 Apr 2021 08:17:56: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 08:17:56: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 08:17:56: #1 total tags in treatment: 18929762 INFO @ Sat, 03 Apr 2021 08:17:56: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 08:17:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 08:17:56: #1 tags after filtering in treatment: 14042513 INFO @ Sat, 03 Apr 2021 08:17:56: #1 Redundant rate of treatment: 0.26 INFO @ Sat, 03 Apr 2021 08:17:56: #1 finished! INFO @ Sat, 03 Apr 2021 08:17:56: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 08:17:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 08:17:58: #2 number of paired peaks: 554 WARNING @ Sat, 03 Apr 2021 08:17:58: Fewer paired peaks (554) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 554 pairs to build model! INFO @ Sat, 03 Apr 2021 08:17:58: start model_add_line... INFO @ Sat, 03 Apr 2021 08:17:58: start X-correlation... INFO @ Sat, 03 Apr 2021 08:17:58: end of X-cor INFO @ Sat, 03 Apr 2021 08:17:58: #2 finished! INFO @ Sat, 03 Apr 2021 08:17:58: #2 predicted fragment length is 64 bps INFO @ Sat, 03 Apr 2021 08:17:58: #2 alternative fragment length(s) may be 4,64,570 bps INFO @ Sat, 03 Apr 2021 08:17:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20_model.r WARNING @ Sat, 03 Apr 2021 08:17:58: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 08:17:58: #2 You may need to consider one of the other alternative d(s): 4,64,570 WARNING @ Sat, 03 Apr 2021 08:17:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 08:17:58: #3 Call peaks... INFO @ Sat, 03 Apr 2021 08:17:58: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 08:18:01: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:18:04: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:18:21: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10_peaks.xls INFO @ Sat, 03 Apr 2021 08:18:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:18:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.10_summits.bed INFO @ Sat, 03 Apr 2021 08:18:21: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (3327 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 08:18:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05_peaks.xls INFO @ Sat, 03 Apr 2021 08:18:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:18:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.05_summits.bed INFO @ Sat, 03 Apr 2021 08:18:25: Done! BigWig に変換しました。 pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (7889 records, 4 fields): 26 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 08:18:36: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:18:57: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20_peaks.xls INFO @ Sat, 03 Apr 2021 08:18:57: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:18:57: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664636/SRX4664636.20_summits.bed INFO @ Sat, 03 Apr 2021 08:18:57: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (959 records, 4 fields): 4 millis CompletedMACS2peakCalling