Job ID = 12265249 SRX = SRX4664628 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 31511208 spots for SRR7813055/SRR7813055.sra Written 31511208 spots for SRR7813055/SRR7813055.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265667 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:13:54 31511208 reads; of these: 31511208 (100.00%) were paired; of these: 8984243 (28.51%) aligned concordantly 0 times 11831205 (37.55%) aligned concordantly exactly 1 time 10695760 (33.94%) aligned concordantly >1 times ---- 8984243 pairs aligned concordantly 0 times; of these: 2837982 (31.59%) aligned discordantly 1 time ---- 6146261 pairs aligned 0 times concordantly or discordantly; of these: 12292522 mates make up the pairs; of these: 8070755 (65.66%) aligned 0 times 1039753 (8.46%) aligned exactly 1 time 3182014 (25.89%) aligned >1 times 87.19% overall alignment rate Time searching: 01:13:54 Overall time: 01:13:54 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5975232 / 24951546 = 0.2395 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:52:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:52:07: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:52:07: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:52:15: 1000000 INFO @ Sat, 03 Apr 2021 07:52:23: 2000000 INFO @ Sat, 03 Apr 2021 07:52:30: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:52:37: 4000000 INFO @ Sat, 03 Apr 2021 07:52:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:52:37: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:52:37: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:52:45: 5000000 INFO @ Sat, 03 Apr 2021 07:52:45: 1000000 INFO @ Sat, 03 Apr 2021 07:52:52: 6000000 INFO @ Sat, 03 Apr 2021 07:52:53: 2000000 INFO @ Sat, 03 Apr 2021 07:53:00: 7000000 INFO @ Sat, 03 Apr 2021 07:53:00: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:53:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:53:07: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:53:07: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:53:08: 4000000 INFO @ Sat, 03 Apr 2021 07:53:09: 8000000 INFO @ Sat, 03 Apr 2021 07:53:16: 5000000 INFO @ Sat, 03 Apr 2021 07:53:17: 9000000 INFO @ Sat, 03 Apr 2021 07:53:17: 1000000 INFO @ Sat, 03 Apr 2021 07:53:23: 6000000 INFO @ Sat, 03 Apr 2021 07:53:24: 10000000 INFO @ Sat, 03 Apr 2021 07:53:27: 2000000 INFO @ Sat, 03 Apr 2021 07:53:31: 7000000 INFO @ Sat, 03 Apr 2021 07:53:32: 11000000 INFO @ Sat, 03 Apr 2021 07:53:37: 3000000 INFO @ Sat, 03 Apr 2021 07:53:40: 12000000 INFO @ Sat, 03 Apr 2021 07:53:40: 8000000 INFO @ Sat, 03 Apr 2021 07:53:47: 4000000 INFO @ Sat, 03 Apr 2021 07:53:48: 13000000 INFO @ Sat, 03 Apr 2021 07:53:48: 9000000 INFO @ Sat, 03 Apr 2021 07:53:55: 10000000 INFO @ Sat, 03 Apr 2021 07:53:56: 14000000 INFO @ Sat, 03 Apr 2021 07:53:56: 5000000 INFO @ Sat, 03 Apr 2021 07:54:03: 11000000 INFO @ Sat, 03 Apr 2021 07:54:04: 15000000 INFO @ Sat, 03 Apr 2021 07:54:05: 6000000 INFO @ Sat, 03 Apr 2021 07:54:11: 12000000 INFO @ Sat, 03 Apr 2021 07:54:12: 16000000 INFO @ Sat, 03 Apr 2021 07:54:14: 7000000 INFO @ Sat, 03 Apr 2021 07:54:19: 13000000 INFO @ Sat, 03 Apr 2021 07:54:20: 17000000 INFO @ Sat, 03 Apr 2021 07:54:24: 8000000 INFO @ Sat, 03 Apr 2021 07:54:27: 14000000 INFO @ Sat, 03 Apr 2021 07:54:28: 18000000 INFO @ Sat, 03 Apr 2021 07:54:33: 9000000 INFO @ Sat, 03 Apr 2021 07:54:35: 15000000 INFO @ Sat, 03 Apr 2021 07:54:36: 19000000 INFO @ Sat, 03 Apr 2021 07:54:42: 10000000 INFO @ Sat, 03 Apr 2021 07:54:43: 16000000 INFO @ Sat, 03 Apr 2021 07:54:44: 20000000 INFO @ Sat, 03 Apr 2021 07:54:51: 11000000 INFO @ Sat, 03 Apr 2021 07:54:51: 17000000 INFO @ Sat, 03 Apr 2021 07:54:52: 21000000 INFO @ Sat, 03 Apr 2021 07:54:59: 18000000 INFO @ Sat, 03 Apr 2021 07:54:59: 22000000 INFO @ Sat, 03 Apr 2021 07:55:00: 12000000 INFO @ Sat, 03 Apr 2021 07:55:07: 19000000 INFO @ Sat, 03 Apr 2021 07:55:07: 23000000 INFO @ Sat, 03 Apr 2021 07:55:09: 13000000 INFO @ Sat, 03 Apr 2021 07:55:15: 20000000 INFO @ Sat, 03 Apr 2021 07:55:15: 24000000 INFO @ Sat, 03 Apr 2021 07:55:18: 14000000 INFO @ Sat, 03 Apr 2021 07:55:23: 21000000 INFO @ Sat, 03 Apr 2021 07:55:23: 25000000 INFO @ Sat, 03 Apr 2021 07:55:27: 15000000 INFO @ Sat, 03 Apr 2021 07:55:30: 22000000 INFO @ Sat, 03 Apr 2021 07:55:31: 26000000 INFO @ Sat, 03 Apr 2021 07:55:36: 16000000 INFO @ Sat, 03 Apr 2021 07:55:38: 23000000 INFO @ Sat, 03 Apr 2021 07:55:38: 27000000 INFO @ Sat, 03 Apr 2021 07:55:45: 17000000 INFO @ Sat, 03 Apr 2021 07:55:46: 24000000 INFO @ Sat, 03 Apr 2021 07:55:46: 28000000 INFO @ Sat, 03 Apr 2021 07:55:54: 29000000 INFO @ Sat, 03 Apr 2021 07:55:54: 25000000 INFO @ Sat, 03 Apr 2021 07:55:54: 18000000 INFO @ Sat, 03 Apr 2021 07:56:01: 30000000 INFO @ Sat, 03 Apr 2021 07:56:01: 26000000 INFO @ Sat, 03 Apr 2021 07:56:03: 19000000 INFO @ Sat, 03 Apr 2021 07:56:08: 31000000 INFO @ Sat, 03 Apr 2021 07:56:09: 27000000 INFO @ Sat, 03 Apr 2021 07:56:11: 20000000 INFO @ Sat, 03 Apr 2021 07:56:16: 32000000 INFO @ Sat, 03 Apr 2021 07:56:17: 28000000 INFO @ Sat, 03 Apr 2021 07:56:20: 21000000 INFO @ Sat, 03 Apr 2021 07:56:24: 33000000 INFO @ Sat, 03 Apr 2021 07:56:24: 29000000 INFO @ Sat, 03 Apr 2021 07:56:29: 22000000 INFO @ Sat, 03 Apr 2021 07:56:31: 34000000 INFO @ Sat, 03 Apr 2021 07:56:32: 30000000 INFO @ Sat, 03 Apr 2021 07:56:38: 23000000 INFO @ Sat, 03 Apr 2021 07:56:39: 31000000 INFO @ Sat, 03 Apr 2021 07:56:39: 35000000 INFO @ Sat, 03 Apr 2021 07:56:46: 32000000 INFO @ Sat, 03 Apr 2021 07:56:47: 36000000 INFO @ Sat, 03 Apr 2021 07:56:47: 24000000 INFO @ Sat, 03 Apr 2021 07:56:54: 37000000 INFO @ Sat, 03 Apr 2021 07:56:55: 33000000 INFO @ Sat, 03 Apr 2021 07:56:56: 25000000 INFO @ Sat, 03 Apr 2021 07:57:02: 38000000 INFO @ Sat, 03 Apr 2021 07:57:02: 34000000 INFO @ Sat, 03 Apr 2021 07:57:05: 26000000 INFO @ Sat, 03 Apr 2021 07:57:09: 39000000 INFO @ Sat, 03 Apr 2021 07:57:10: 35000000 INFO @ Sat, 03 Apr 2021 07:57:13: 27000000 INFO @ Sat, 03 Apr 2021 07:57:17: 40000000 INFO @ Sat, 03 Apr 2021 07:57:17: 36000000 INFO @ Sat, 03 Apr 2021 07:57:22: 28000000 INFO @ Sat, 03 Apr 2021 07:57:25: 37000000 INFO @ Sat, 03 Apr 2021 07:57:25: 41000000 INFO @ Sat, 03 Apr 2021 07:57:31: 29000000 INFO @ Sat, 03 Apr 2021 07:57:32: 38000000 INFO @ Sat, 03 Apr 2021 07:57:33: 42000000 INFO @ Sat, 03 Apr 2021 07:57:39: 30000000 INFO @ Sat, 03 Apr 2021 07:57:40: 39000000 INFO @ Sat, 03 Apr 2021 07:57:40: 43000000 INFO @ Sat, 03 Apr 2021 07:57:41: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:57:41: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:57:41: #1 total tags in treatment: 16916350 INFO @ Sat, 03 Apr 2021 07:57:41: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:57:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:57:41: #1 tags after filtering in treatment: 13220354 INFO @ Sat, 03 Apr 2021 07:57:41: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 07:57:41: #1 finished! INFO @ Sat, 03 Apr 2021 07:57:41: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:57:41: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:57:42: #2 number of paired peaks: 424 WARNING @ Sat, 03 Apr 2021 07:57:42: Fewer paired peaks (424) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 424 pairs to build model! INFO @ Sat, 03 Apr 2021 07:57:42: start model_add_line... INFO @ Sat, 03 Apr 2021 07:57:42: start X-correlation... INFO @ Sat, 03 Apr 2021 07:57:42: end of X-cor INFO @ Sat, 03 Apr 2021 07:57:42: #2 finished! INFO @ Sat, 03 Apr 2021 07:57:42: #2 predicted fragment length is 77 bps INFO @ Sat, 03 Apr 2021 07:57:42: #2 alternative fragment length(s) may be 4,77 bps INFO @ Sat, 03 Apr 2021 07:57:42: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05_model.r WARNING @ Sat, 03 Apr 2021 07:57:42: #2 Since the d (77) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:57:42: #2 You may need to consider one of the other alternative d(s): 4,77 WARNING @ Sat, 03 Apr 2021 07:57:42: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:57:42: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:57:42: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:57:48: 31000000 INFO @ Sat, 03 Apr 2021 07:57:48: 40000000 INFO @ Sat, 03 Apr 2021 07:57:55: 41000000 INFO @ Sat, 03 Apr 2021 07:57:56: 32000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:58:03: 42000000 INFO @ Sat, 03 Apr 2021 07:58:05: 33000000 INFO @ Sat, 03 Apr 2021 07:58:11: 43000000 INFO @ Sat, 03 Apr 2021 07:58:11: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:58:11: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:58:11: #1 total tags in treatment: 16916350 INFO @ Sat, 03 Apr 2021 07:58:11: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:58:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:58:11: #1 tags after filtering in treatment: 13220354 INFO @ Sat, 03 Apr 2021 07:58:11: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 07:58:11: #1 finished! INFO @ Sat, 03 Apr 2021 07:58:11: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:58:11: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:58:12: #2 number of paired peaks: 424 WARNING @ Sat, 03 Apr 2021 07:58:12: Fewer paired peaks (424) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 424 pairs to build model! INFO @ Sat, 03 Apr 2021 07:58:12: start model_add_line... INFO @ Sat, 03 Apr 2021 07:58:13: start X-correlation... INFO @ Sat, 03 Apr 2021 07:58:13: end of X-cor INFO @ Sat, 03 Apr 2021 07:58:13: #2 finished! INFO @ Sat, 03 Apr 2021 07:58:13: #2 predicted fragment length is 77 bps INFO @ Sat, 03 Apr 2021 07:58:13: #2 alternative fragment length(s) may be 4,77 bps INFO @ Sat, 03 Apr 2021 07:58:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10_model.r WARNING @ Sat, 03 Apr 2021 07:58:13: #2 Since the d (77) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:58:13: #2 You may need to consider one of the other alternative d(s): 4,77 WARNING @ Sat, 03 Apr 2021 07:58:13: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:58:13: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:58:13: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:58:14: 34000000 INFO @ Sat, 03 Apr 2021 07:58:19: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:58:22: 35000000 INFO @ Sat, 03 Apr 2021 07:58:30: 36000000 INFO @ Sat, 03 Apr 2021 07:58:38: 37000000 INFO @ Sat, 03 Apr 2021 07:58:38: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:58:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:58:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.05_summits.bed INFO @ Sat, 03 Apr 2021 07:58:38: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (5027 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:58:46: 38000000 INFO @ Sat, 03 Apr 2021 07:58:49: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:58:54: 39000000 INFO @ Sat, 03 Apr 2021 07:59:03: 40000000 INFO @ Sat, 03 Apr 2021 07:59:07: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:59:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:59:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.10_summits.bed INFO @ Sat, 03 Apr 2021 07:59:07: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (2436 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:59:11: 41000000 INFO @ Sat, 03 Apr 2021 07:59:19: 42000000 INFO @ Sat, 03 Apr 2021 07:59:27: 43000000 INFO @ Sat, 03 Apr 2021 07:59:28: #1 tag size is determined as 50 bps INFO @ Sat, 03 Apr 2021 07:59:28: #1 tag size = 50 INFO @ Sat, 03 Apr 2021 07:59:28: #1 total tags in treatment: 16916350 INFO @ Sat, 03 Apr 2021 07:59:28: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:59:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:59:28: #1 tags after filtering in treatment: 13220354 INFO @ Sat, 03 Apr 2021 07:59:28: #1 Redundant rate of treatment: 0.22 INFO @ Sat, 03 Apr 2021 07:59:28: #1 finished! INFO @ Sat, 03 Apr 2021 07:59:28: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:59:28: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:59:29: #2 number of paired peaks: 424 WARNING @ Sat, 03 Apr 2021 07:59:29: Fewer paired peaks (424) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 424 pairs to build model! INFO @ Sat, 03 Apr 2021 07:59:29: start model_add_line... INFO @ Sat, 03 Apr 2021 07:59:29: start X-correlation... INFO @ Sat, 03 Apr 2021 07:59:29: end of X-cor INFO @ Sat, 03 Apr 2021 07:59:29: #2 finished! INFO @ Sat, 03 Apr 2021 07:59:29: #2 predicted fragment length is 77 bps INFO @ Sat, 03 Apr 2021 07:59:29: #2 alternative fragment length(s) may be 4,77 bps INFO @ Sat, 03 Apr 2021 07:59:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20_model.r WARNING @ Sat, 03 Apr 2021 07:59:29: #2 Since the d (77) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:59:29: #2 You may need to consider one of the other alternative d(s): 4,77 WARNING @ Sat, 03 Apr 2021 07:59:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:59:29: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:59:29: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 08:00:06: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 08:00:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20_peaks.xls INFO @ Sat, 03 Apr 2021 08:00:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 08:00:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX4664628/SRX4664628.20_summits.bed INFO @ Sat, 03 Apr 2021 08:00:25: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (833 records, 4 fields): 5 millis CompletedMACS2peakCalling