Job ID = 11158508 sra ファイルのダウンロード中... Completed: 1383138K bytes transferred in 29 seconds (379650K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 39511577 spots for /home/okishinya/chipatlas/results/dm3/SRX4546294/SRR7685797.sra Written 39511577 spots for /home/okishinya/chipatlas/results/dm3/SRX4546294/SRR7685797.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:09:52 39511577 reads; of these: 39511577 (100.00%) were paired; of these: 6532202 (16.53%) aligned concordantly 0 times 20076284 (50.81%) aligned concordantly exactly 1 time 12903091 (32.66%) aligned concordantly >1 times ---- 6532202 pairs aligned concordantly 0 times; of these: 2279254 (34.89%) aligned discordantly 1 time ---- 4252948 pairs aligned 0 times concordantly or discordantly; of these: 8505896 mates make up the pairs; of these: 4738742 (55.71%) aligned 0 times 1053173 (12.38%) aligned exactly 1 time 2713981 (31.91%) aligned >1 times 94.00% overall alignment rate Time searching: 01:09:53 Overall time: 01:09:53 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10295025 / 34891984 = 0.2951 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 04 Sep 2018 11:06:19: # Command line: callpeak -t SRX4546294.bam -f BAM -g dm -n SRX4546294.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4546294.05 # format = BAM # ChIP-seq file = ['SRX4546294.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 11:06:19: # Command line: callpeak -t SRX4546294.bam -f BAM -g dm -n SRX4546294.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4546294.20 # format = BAM # ChIP-seq file = ['SRX4546294.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 11:06:19: # Command line: callpeak -t SRX4546294.bam -f BAM -g dm -n SRX4546294.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4546294.10 # format = BAM # ChIP-seq file = ['SRX4546294.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 11:06:19: #1 read tag files... INFO @ Tue, 04 Sep 2018 11:06:19: #1 read tag files... INFO @ Tue, 04 Sep 2018 11:06:19: #1 read tag files... INFO @ Tue, 04 Sep 2018 11:06:19: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 11:06:19: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 11:06:19: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 11:06:25: 1000000 INFO @ Tue, 04 Sep 2018 11:06:25: 1000000 INFO @ Tue, 04 Sep 2018 11:06:25: 1000000 INFO @ Tue, 04 Sep 2018 11:06:31: 2000000 INFO @ Tue, 04 Sep 2018 11:06:31: 2000000 INFO @ Tue, 04 Sep 2018 11:06:31: 2000000 INFO @ Tue, 04 Sep 2018 11:06:37: 3000000 INFO @ Tue, 04 Sep 2018 11:06:37: 3000000 INFO @ Tue, 04 Sep 2018 11:06:37: 3000000 INFO @ Tue, 04 Sep 2018 11:06:43: 4000000 INFO @ Tue, 04 Sep 2018 11:06:43: 4000000 INFO @ Tue, 04 Sep 2018 11:06:43: 4000000 INFO @ Tue, 04 Sep 2018 11:06:49: 5000000 INFO @ Tue, 04 Sep 2018 11:06:49: 5000000 INFO @ Tue, 04 Sep 2018 11:06:49: 5000000 INFO @ Tue, 04 Sep 2018 11:06:55: 6000000 INFO @ Tue, 04 Sep 2018 11:06:55: 6000000 INFO @ Tue, 04 Sep 2018 11:06:55: 6000000 INFO @ Tue, 04 Sep 2018 11:07:01: 7000000 INFO @ Tue, 04 Sep 2018 11:07:01: 7000000 INFO @ Tue, 04 Sep 2018 11:07:01: 7000000 INFO @ Tue, 04 Sep 2018 11:07:07: 8000000 INFO @ Tue, 04 Sep 2018 11:07:07: 8000000 INFO @ Tue, 04 Sep 2018 11:07:07: 8000000 INFO @ Tue, 04 Sep 2018 11:07:13: 9000000 INFO @ Tue, 04 Sep 2018 11:07:13: 9000000 INFO @ Tue, 04 Sep 2018 11:07:13: 9000000 INFO @ Tue, 04 Sep 2018 11:07:19: 10000000 INFO @ Tue, 04 Sep 2018 11:07:19: 10000000 INFO @ Tue, 04 Sep 2018 11:07:19: 10000000 INFO @ Tue, 04 Sep 2018 11:07:25: 11000000 INFO @ Tue, 04 Sep 2018 11:07:25: 11000000 INFO @ Tue, 04 Sep 2018 11:07:25: 11000000 INFO @ Tue, 04 Sep 2018 11:07:31: 12000000 INFO @ Tue, 04 Sep 2018 11:07:31: 12000000 INFO @ Tue, 04 Sep 2018 11:07:31: 12000000 INFO @ Tue, 04 Sep 2018 11:07:37: 13000000 INFO @ Tue, 04 Sep 2018 11:07:37: 13000000 INFO @ Tue, 04 Sep 2018 11:07:37: 13000000 INFO @ Tue, 04 Sep 2018 11:07:43: 14000000 INFO @ Tue, 04 Sep 2018 11:07:43: 14000000 INFO @ Tue, 04 Sep 2018 11:07:43: 14000000 INFO @ Tue, 04 Sep 2018 11:07:49: 15000000 INFO @ Tue, 04 Sep 2018 11:07:49: 15000000 INFO @ Tue, 04 Sep 2018 11:07:49: 15000000 INFO @ Tue, 04 Sep 2018 11:07:55: 16000000 INFO @ Tue, 04 Sep 2018 11:07:55: 16000000 INFO @ Tue, 04 Sep 2018 11:07:55: 16000000 INFO @ Tue, 04 Sep 2018 11:08:01: 17000000 INFO @ Tue, 04 Sep 2018 11:08:01: 17000000 INFO @ Tue, 04 Sep 2018 11:08:02: 17000000 INFO @ Tue, 04 Sep 2018 11:08:07: 18000000 INFO @ Tue, 04 Sep 2018 11:08:08: 18000000 INFO @ Tue, 04 Sep 2018 11:08:08: 18000000 INFO @ Tue, 04 Sep 2018 11:08:13: 19000000 INFO @ Tue, 04 Sep 2018 11:08:14: 19000000 INFO @ Tue, 04 Sep 2018 11:08:14: 19000000 INFO @ Tue, 04 Sep 2018 11:08:19: 20000000 INFO @ Tue, 04 Sep 2018 11:08:19: 20000000 INFO @ Tue, 04 Sep 2018 11:08:20: 20000000 INFO @ Tue, 04 Sep 2018 11:08:25: 21000000 INFO @ Tue, 04 Sep 2018 11:08:25: 21000000 INFO @ Tue, 04 Sep 2018 11:08:26: 21000000 INFO @ Tue, 04 Sep 2018 11:08:31: 22000000 INFO @ Tue, 04 Sep 2018 11:08:31: 22000000 INFO @ Tue, 04 Sep 2018 11:08:32: 22000000 INFO @ Tue, 04 Sep 2018 11:08:37: 23000000 INFO @ Tue, 04 Sep 2018 11:08:37: 23000000 INFO @ Tue, 04 Sep 2018 11:08:38: 23000000 INFO @ Tue, 04 Sep 2018 11:08:43: 24000000 INFO @ Tue, 04 Sep 2018 11:08:43: 24000000 INFO @ Tue, 04 Sep 2018 11:08:45: 24000000 INFO @ Tue, 04 Sep 2018 11:08:49: 25000000 INFO @ Tue, 04 Sep 2018 11:08:49: 25000000 INFO @ Tue, 04 Sep 2018 11:08:51: 25000000 INFO @ Tue, 04 Sep 2018 11:08:55: 26000000 INFO @ Tue, 04 Sep 2018 11:08:56: 26000000 INFO @ Tue, 04 Sep 2018 11:08:57: 26000000 INFO @ Tue, 04 Sep 2018 11:09:02: 27000000 INFO @ Tue, 04 Sep 2018 11:09:02: 27000000 INFO @ Tue, 04 Sep 2018 11:09:03: 27000000 INFO @ Tue, 04 Sep 2018 11:09:08: 28000000 INFO @ Tue, 04 Sep 2018 11:09:08: 28000000 INFO @ Tue, 04 Sep 2018 11:09:09: 28000000 INFO @ Tue, 04 Sep 2018 11:09:14: 29000000 INFO @ Tue, 04 Sep 2018 11:09:14: 29000000 INFO @ Tue, 04 Sep 2018 11:09:15: 29000000 INFO @ Tue, 04 Sep 2018 11:09:20: 30000000 INFO @ Tue, 04 Sep 2018 11:09:20: 30000000 INFO @ Tue, 04 Sep 2018 11:09:21: 30000000 INFO @ Tue, 04 Sep 2018 11:09:26: 31000000 INFO @ Tue, 04 Sep 2018 11:09:26: 31000000 INFO @ Tue, 04 Sep 2018 11:09:27: 31000000 INFO @ Tue, 04 Sep 2018 11:09:32: 32000000 INFO @ Tue, 04 Sep 2018 11:09:32: 32000000 INFO @ Tue, 04 Sep 2018 11:09:33: 32000000 INFO @ Tue, 04 Sep 2018 11:09:38: 33000000 INFO @ Tue, 04 Sep 2018 11:09:38: 33000000 INFO @ Tue, 04 Sep 2018 11:09:40: 33000000 INFO @ Tue, 04 Sep 2018 11:09:44: 34000000 INFO @ Tue, 04 Sep 2018 11:09:44: 34000000 INFO @ Tue, 04 Sep 2018 11:09:46: 34000000 INFO @ Tue, 04 Sep 2018 11:09:50: 35000000 INFO @ Tue, 04 Sep 2018 11:09:50: 35000000 INFO @ Tue, 04 Sep 2018 11:09:52: 35000000 INFO @ Tue, 04 Sep 2018 11:09:55: 36000000 INFO @ Tue, 04 Sep 2018 11:09:56: 36000000 INFO @ Tue, 04 Sep 2018 11:09:58: 36000000 INFO @ Tue, 04 Sep 2018 11:10:01: 37000000 INFO @ Tue, 04 Sep 2018 11:10:02: 37000000 INFO @ Tue, 04 Sep 2018 11:10:04: 37000000 INFO @ Tue, 04 Sep 2018 11:10:07: 38000000 INFO @ Tue, 04 Sep 2018 11:10:08: 38000000 INFO @ Tue, 04 Sep 2018 11:10:09: 38000000 INFO @ Tue, 04 Sep 2018 11:10:12: 39000000 INFO @ Tue, 04 Sep 2018 11:10:14: 39000000 INFO @ Tue, 04 Sep 2018 11:10:15: 39000000 INFO @ Tue, 04 Sep 2018 11:10:18: 40000000 INFO @ Tue, 04 Sep 2018 11:10:19: 40000000 INFO @ Tue, 04 Sep 2018 11:10:21: 40000000 INFO @ Tue, 04 Sep 2018 11:10:24: 41000000 INFO @ Tue, 04 Sep 2018 11:10:25: 41000000 INFO @ Tue, 04 Sep 2018 11:10:27: 41000000 INFO @ Tue, 04 Sep 2018 11:10:30: 42000000 INFO @ Tue, 04 Sep 2018 11:10:31: 42000000 INFO @ Tue, 04 Sep 2018 11:10:33: 42000000 INFO @ Tue, 04 Sep 2018 11:10:36: 43000000 INFO @ Tue, 04 Sep 2018 11:10:37: 43000000 INFO @ Tue, 04 Sep 2018 11:10:39: 43000000 INFO @ Tue, 04 Sep 2018 11:10:41: 44000000 INFO @ Tue, 04 Sep 2018 11:10:43: 44000000 INFO @ Tue, 04 Sep 2018 11:10:45: 44000000 INFO @ Tue, 04 Sep 2018 11:10:47: 45000000 INFO @ Tue, 04 Sep 2018 11:10:49: 45000000 INFO @ Tue, 04 Sep 2018 11:10:51: 45000000 INFO @ Tue, 04 Sep 2018 11:10:53: 46000000 INFO @ Tue, 04 Sep 2018 11:10:55: 46000000 INFO @ Tue, 04 Sep 2018 11:10:57: 46000000 INFO @ Tue, 04 Sep 2018 11:10:59: 47000000 INFO @ Tue, 04 Sep 2018 11:11:01: 47000000 INFO @ Tue, 04 Sep 2018 11:11:03: 47000000 INFO @ Tue, 04 Sep 2018 11:11:05: 48000000 INFO @ Tue, 04 Sep 2018 11:11:07: 48000000 INFO @ Tue, 04 Sep 2018 11:11:09: 48000000 INFO @ Tue, 04 Sep 2018 11:11:10: 49000000 INFO @ Tue, 04 Sep 2018 11:11:13: 49000000 INFO @ Tue, 04 Sep 2018 11:11:15: 49000000 INFO @ Tue, 04 Sep 2018 11:11:16: 50000000 INFO @ Tue, 04 Sep 2018 11:11:19: 50000000 INFO @ Tue, 04 Sep 2018 11:11:21: 50000000 INFO @ Tue, 04 Sep 2018 11:11:22: 51000000 INFO @ Tue, 04 Sep 2018 11:11:25: 51000000 INFO @ Tue, 04 Sep 2018 11:11:27: 51000000 INFO @ Tue, 04 Sep 2018 11:11:28: 52000000 INFO @ Tue, 04 Sep 2018 11:11:31: 52000000 INFO @ Tue, 04 Sep 2018 11:11:33: 52000000 INFO @ Tue, 04 Sep 2018 11:11:34: 53000000 INFO @ Tue, 04 Sep 2018 11:11:37: 53000000 INFO @ Tue, 04 Sep 2018 11:11:38: #1 tag size is determined as 51 bps INFO @ Tue, 04 Sep 2018 11:11:38: #1 tag size = 51 INFO @ Tue, 04 Sep 2018 11:11:38: #1 total tags in treatment: 22964134 INFO @ Tue, 04 Sep 2018 11:11:38: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 11:11:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 11:11:38: #1 tags after filtering in treatment: 13023205 INFO @ Tue, 04 Sep 2018 11:11:38: #1 Redundant rate of treatment: 0.43 INFO @ Tue, 04 Sep 2018 11:11:38: #1 finished! INFO @ Tue, 04 Sep 2018 11:11:38: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 11:11:38: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 11:11:39: 53000000 INFO @ Tue, 04 Sep 2018 11:11:40: #2 number of paired peaks: 2709 INFO @ Tue, 04 Sep 2018 11:11:40: start model_add_line... INFO @ Tue, 04 Sep 2018 11:11:40: start X-correlation... INFO @ Tue, 04 Sep 2018 11:11:40: end of X-cor INFO @ Tue, 04 Sep 2018 11:11:40: #2 finished! INFO @ Tue, 04 Sep 2018 11:11:40: #2 predicted fragment length is 101 bps INFO @ Tue, 04 Sep 2018 11:11:40: #2 alternative fragment length(s) may be 101 bps INFO @ Tue, 04 Sep 2018 11:11:40: #2.2 Generate R script for model : SRX4546294.10_model.r WARNING @ Tue, 04 Sep 2018 11:11:40: #2 Since the d (101) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 04 Sep 2018 11:11:40: #2 You may need to consider one of the other alternative d(s): 101 WARNING @ Tue, 04 Sep 2018 11:11:40: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 04 Sep 2018 11:11:40: #3 Call peaks... INFO @ Tue, 04 Sep 2018 11:11:40: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 11:11:42: #1 tag size is determined as 51 bps INFO @ Tue, 04 Sep 2018 11:11:42: #1 tag size = 51 INFO @ Tue, 04 Sep 2018 11:11:42: #1 total tags in treatment: 22964134 INFO @ Tue, 04 Sep 2018 11:11:42: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 11:11:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 11:11:42: #1 tags after filtering in treatment: 13023205 INFO @ Tue, 04 Sep 2018 11:11:42: #1 Redundant rate of treatment: 0.43 INFO @ Tue, 04 Sep 2018 11:11:42: #1 finished! INFO @ Tue, 04 Sep 2018 11:11:42: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 11:11:42: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 11:11:43: #2 number of paired peaks: 2709 INFO @ Tue, 04 Sep 2018 11:11:43: start model_add_line... INFO @ Tue, 04 Sep 2018 11:11:43: start X-correlation... INFO @ Tue, 04 Sep 2018 11:11:43: end of X-cor INFO @ Tue, 04 Sep 2018 11:11:43: #2 finished! INFO @ Tue, 04 Sep 2018 11:11:43: #2 predicted fragment length is 101 bps INFO @ Tue, 04 Sep 2018 11:11:43: #2 alternative fragment length(s) may be 101 bps INFO @ Tue, 04 Sep 2018 11:11:43: #2.2 Generate R script for model : SRX4546294.20_model.r WARNING @ Tue, 04 Sep 2018 11:11:43: #2 Since the d (101) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 04 Sep 2018 11:11:43: #2 You may need to consider one of the other alternative d(s): 101 WARNING @ Tue, 04 Sep 2018 11:11:43: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 04 Sep 2018 11:11:43: #3 Call peaks... INFO @ Tue, 04 Sep 2018 11:11:43: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 11:11:44: #1 tag size is determined as 51 bps INFO @ Tue, 04 Sep 2018 11:11:44: #1 tag size = 51 INFO @ Tue, 04 Sep 2018 11:11:44: #1 total tags in treatment: 22964134 INFO @ Tue, 04 Sep 2018 11:11:44: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 11:11:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 11:11:44: #1 tags after filtering in treatment: 13023205 INFO @ Tue, 04 Sep 2018 11:11:44: #1 Redundant rate of treatment: 0.43 INFO @ Tue, 04 Sep 2018 11:11:44: #1 finished! INFO @ Tue, 04 Sep 2018 11:11:44: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 11:11:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 11:11:45: #2 number of paired peaks: 2709 INFO @ Tue, 04 Sep 2018 11:11:45: start model_add_line... INFO @ Tue, 04 Sep 2018 11:11:46: start X-correlation... INFO @ Tue, 04 Sep 2018 11:11:46: end of X-cor INFO @ Tue, 04 Sep 2018 11:11:46: #2 finished! INFO @ Tue, 04 Sep 2018 11:11:46: #2 predicted fragment length is 101 bps INFO @ Tue, 04 Sep 2018 11:11:46: #2 alternative fragment length(s) may be 101 bps INFO @ Tue, 04 Sep 2018 11:11:46: #2.2 Generate R script for model : SRX4546294.05_model.r WARNING @ Tue, 04 Sep 2018 11:11:46: #2 Since the d (101) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 04 Sep 2018 11:11:46: #2 You may need to consider one of the other alternative d(s): 101 WARNING @ Tue, 04 Sep 2018 11:11:46: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 04 Sep 2018 11:11:46: #3 Call peaks... INFO @ Tue, 04 Sep 2018 11:11:46: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 11:12:10: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 11:12:15: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 11:12:15: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 11:12:28: #4 Write output xls file... SRX4546294.10_peaks.xls INFO @ Tue, 04 Sep 2018 11:12:28: #4 Write peak in narrowPeak format file... SRX4546294.10_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 11:12:28: #4 Write summits bed file... SRX4546294.10_summits.bed INFO @ Tue, 04 Sep 2018 11:12:28: Done! pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (13680 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 11:12:30: #4 Write output xls file... SRX4546294.20_peaks.xls INFO @ Tue, 04 Sep 2018 11:12:30: #4 Write peak in narrowPeak format file... SRX4546294.20_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 11:12:30: #4 Write summits bed file... SRX4546294.20_summits.bed INFO @ Tue, 04 Sep 2018 11:12:30: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (7078 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 11:12:33: #4 Write output xls file... SRX4546294.05_peaks.xls INFO @ Tue, 04 Sep 2018 11:12:33: #4 Write peak in narrowPeak format file... SRX4546294.05_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 11:12:33: #4 Write summits bed file... SRX4546294.05_summits.bed INFO @ Tue, 04 Sep 2018 11:12:33: Done! pass1 - making usageList (15 chroms): 6 millis pass2 - checking and writing primary data (19959 records, 4 fields): 24 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。