Job ID = 11158472 sra ファイルのダウンロード中... Completed: 5290496K bytes transferred in 210 seconds (205716K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 83079599 spots for /home/okishinya/chipatlas/results/dm3/SRX3141080/SRR5985086.sra Written 83079599 spots for /home/okishinya/chipatlas/results/dm3/SRX3141080/SRR5985086.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:18:19 83079599 reads; of these: 83079599 (100.00%) were paired; of these: 13874936 (16.70%) aligned concordantly 0 times 56729821 (68.28%) aligned concordantly exactly 1 time 12474842 (15.02%) aligned concordantly >1 times ---- 13874936 pairs aligned concordantly 0 times; of these: 1415121 (10.20%) aligned discordantly 1 time ---- 12459815 pairs aligned 0 times concordantly or discordantly; of these: 24919630 mates make up the pairs; of these: 14732617 (59.12%) aligned 0 times 6636638 (26.63%) aligned exactly 1 time 3550375 (14.25%) aligned >1 times 91.13% overall alignment rate Time searching: 03:18:20 Overall time: 03:18:20 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 64 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 17084151 / 70461977 = 0.2425 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 04 Sep 2018 14:08:10: # Command line: callpeak -t SRX3141080.bam -f BAM -g dm -n SRX3141080.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3141080.20 # format = BAM # ChIP-seq file = ['SRX3141080.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 14:08:10: # Command line: callpeak -t SRX3141080.bam -f BAM -g dm -n SRX3141080.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3141080.05 # format = BAM # ChIP-seq file = ['SRX3141080.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 14:08:10: #1 read tag files... INFO @ Tue, 04 Sep 2018 14:08:10: #1 read tag files... INFO @ Tue, 04 Sep 2018 14:08:10: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 14:08:10: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 14:08:10: # Command line: callpeak -t SRX3141080.bam -f BAM -g dm -n SRX3141080.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3141080.10 # format = BAM # ChIP-seq file = ['SRX3141080.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 14:08:10: #1 read tag files... INFO @ Tue, 04 Sep 2018 14:08:10: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 14:08:18: 1000000 INFO @ Tue, 04 Sep 2018 14:08:19: 1000000 INFO @ Tue, 04 Sep 2018 14:08:20: 1000000 INFO @ Tue, 04 Sep 2018 14:08:26: 2000000 INFO @ Tue, 04 Sep 2018 14:08:29: 2000000 INFO @ Tue, 04 Sep 2018 14:08:30: 2000000 INFO @ Tue, 04 Sep 2018 14:08:34: 3000000 INFO @ Tue, 04 Sep 2018 14:08:39: 3000000 INFO @ Tue, 04 Sep 2018 14:08:41: 3000000 INFO @ Tue, 04 Sep 2018 14:08:42: 4000000 INFO @ Tue, 04 Sep 2018 14:08:49: 4000000 INFO @ Tue, 04 Sep 2018 14:08:51: 5000000 INFO @ Tue, 04 Sep 2018 14:08:51: 4000000 INFO @ Tue, 04 Sep 2018 14:08:59: 6000000 INFO @ Tue, 04 Sep 2018 14:08:59: 5000000 INFO @ Tue, 04 Sep 2018 14:09:01: 5000000 INFO @ Tue, 04 Sep 2018 14:09:07: 7000000 INFO @ Tue, 04 Sep 2018 14:09:09: 6000000 INFO @ Tue, 04 Sep 2018 14:09:12: 6000000 INFO @ Tue, 04 Sep 2018 14:09:15: 8000000 INFO @ Tue, 04 Sep 2018 14:09:19: 7000000 INFO @ Tue, 04 Sep 2018 14:09:22: 7000000 INFO @ Tue, 04 Sep 2018 14:09:23: 9000000 INFO @ Tue, 04 Sep 2018 14:09:29: 8000000 INFO @ Tue, 04 Sep 2018 14:09:31: 10000000 INFO @ Tue, 04 Sep 2018 14:09:33: 8000000 INFO @ Tue, 04 Sep 2018 14:09:39: 11000000 INFO @ Tue, 04 Sep 2018 14:09:39: 9000000 INFO @ Tue, 04 Sep 2018 14:09:43: 9000000 INFO @ Tue, 04 Sep 2018 14:09:47: 12000000 INFO @ Tue, 04 Sep 2018 14:09:49: 10000000 INFO @ Tue, 04 Sep 2018 14:09:53: 10000000 INFO @ Tue, 04 Sep 2018 14:09:55: 13000000 INFO @ Tue, 04 Sep 2018 14:09:59: 11000000 INFO @ Tue, 04 Sep 2018 14:10:03: 14000000 INFO @ Tue, 04 Sep 2018 14:10:04: 11000000 INFO @ Tue, 04 Sep 2018 14:10:09: 12000000 INFO @ Tue, 04 Sep 2018 14:10:11: 15000000 INFO @ Tue, 04 Sep 2018 14:10:14: 12000000 INFO @ Tue, 04 Sep 2018 14:10:19: 16000000 INFO @ Tue, 04 Sep 2018 14:10:19: 13000000 INFO @ Tue, 04 Sep 2018 14:10:25: 13000000 INFO @ Tue, 04 Sep 2018 14:10:27: 17000000 INFO @ Tue, 04 Sep 2018 14:10:29: 14000000 INFO @ Tue, 04 Sep 2018 14:10:35: 18000000 INFO @ Tue, 04 Sep 2018 14:10:35: 14000000 INFO @ Tue, 04 Sep 2018 14:10:39: 15000000 INFO @ Tue, 04 Sep 2018 14:10:42: 19000000 INFO @ Tue, 04 Sep 2018 14:10:46: 15000000 INFO @ Tue, 04 Sep 2018 14:10:49: 16000000 INFO @ Tue, 04 Sep 2018 14:10:50: 20000000 INFO @ Tue, 04 Sep 2018 14:10:56: 16000000 INFO @ Tue, 04 Sep 2018 14:10:58: 21000000 INFO @ Tue, 04 Sep 2018 14:10:59: 17000000 INFO @ Tue, 04 Sep 2018 14:11:06: 22000000 INFO @ Tue, 04 Sep 2018 14:11:06: 17000000 INFO @ Tue, 04 Sep 2018 14:11:09: 18000000 INFO @ Tue, 04 Sep 2018 14:11:14: 23000000 INFO @ Tue, 04 Sep 2018 14:11:17: 18000000 INFO @ Tue, 04 Sep 2018 14:11:19: 19000000 INFO @ Tue, 04 Sep 2018 14:11:22: 24000000 INFO @ Tue, 04 Sep 2018 14:11:27: 19000000 INFO @ Tue, 04 Sep 2018 14:11:29: 20000000 INFO @ Tue, 04 Sep 2018 14:11:30: 25000000 INFO @ Tue, 04 Sep 2018 14:11:37: 20000000 INFO @ Tue, 04 Sep 2018 14:11:38: 26000000 INFO @ Tue, 04 Sep 2018 14:11:38: 21000000 INFO @ Tue, 04 Sep 2018 14:11:46: 27000000 INFO @ Tue, 04 Sep 2018 14:11:48: 21000000 INFO @ Tue, 04 Sep 2018 14:11:48: 22000000 INFO @ Tue, 04 Sep 2018 14:11:54: 28000000 INFO @ Tue, 04 Sep 2018 14:11:58: 22000000 INFO @ Tue, 04 Sep 2018 14:11:58: 23000000 INFO @ Tue, 04 Sep 2018 14:12:02: 29000000 INFO @ Tue, 04 Sep 2018 14:12:08: 24000000 INFO @ Tue, 04 Sep 2018 14:12:08: 23000000 INFO @ Tue, 04 Sep 2018 14:12:10: 30000000 INFO @ Tue, 04 Sep 2018 14:12:17: 31000000 INFO @ Tue, 04 Sep 2018 14:12:18: 25000000 INFO @ Tue, 04 Sep 2018 14:12:18: 24000000 INFO @ Tue, 04 Sep 2018 14:12:25: 32000000 INFO @ Tue, 04 Sep 2018 14:12:27: 26000000 INFO @ Tue, 04 Sep 2018 14:12:28: 25000000 INFO @ Tue, 04 Sep 2018 14:12:33: 33000000 INFO @ Tue, 04 Sep 2018 14:12:37: 27000000 INFO @ Tue, 04 Sep 2018 14:12:39: 26000000 INFO @ Tue, 04 Sep 2018 14:12:41: 34000000 INFO @ Tue, 04 Sep 2018 14:12:47: 28000000 INFO @ Tue, 04 Sep 2018 14:12:49: 27000000 INFO @ Tue, 04 Sep 2018 14:12:49: 35000000 INFO @ Tue, 04 Sep 2018 14:12:57: 29000000 INFO @ Tue, 04 Sep 2018 14:12:57: 36000000 INFO @ Tue, 04 Sep 2018 14:12:59: 28000000 INFO @ Tue, 04 Sep 2018 14:13:05: 37000000 INFO @ Tue, 04 Sep 2018 14:13:07: 30000000 INFO @ Tue, 04 Sep 2018 14:13:09: 29000000 INFO @ Tue, 04 Sep 2018 14:13:13: 38000000 INFO @ Tue, 04 Sep 2018 14:13:17: 31000000 INFO @ Tue, 04 Sep 2018 14:13:20: 30000000 INFO @ Tue, 04 Sep 2018 14:13:21: 39000000 INFO @ Tue, 04 Sep 2018 14:13:26: 32000000 INFO @ Tue, 04 Sep 2018 14:13:29: 40000000 INFO @ Tue, 04 Sep 2018 14:13:30: 31000000 INFO @ Tue, 04 Sep 2018 14:13:36: 33000000 INFO @ Tue, 04 Sep 2018 14:13:37: 41000000 INFO @ Tue, 04 Sep 2018 14:13:40: 32000000 INFO @ Tue, 04 Sep 2018 14:13:45: 42000000 INFO @ Tue, 04 Sep 2018 14:13:46: 34000000 INFO @ Tue, 04 Sep 2018 14:13:50: 33000000 INFO @ Tue, 04 Sep 2018 14:13:52: 43000000 INFO @ Tue, 04 Sep 2018 14:13:56: 35000000 INFO @ Tue, 04 Sep 2018 14:14:00: 44000000 INFO @ Tue, 04 Sep 2018 14:14:01: 34000000 INFO @ Tue, 04 Sep 2018 14:14:06: 36000000 INFO @ Tue, 04 Sep 2018 14:14:08: 45000000 INFO @ Tue, 04 Sep 2018 14:14:11: 35000000 INFO @ Tue, 04 Sep 2018 14:14:15: 37000000 INFO @ Tue, 04 Sep 2018 14:14:16: 46000000 INFO @ Tue, 04 Sep 2018 14:14:21: 36000000 INFO @ Tue, 04 Sep 2018 14:14:23: 47000000 INFO @ Tue, 04 Sep 2018 14:14:25: 38000000 INFO @ Tue, 04 Sep 2018 14:14:31: 37000000 INFO @ Tue, 04 Sep 2018 14:14:31: 48000000 INFO @ Tue, 04 Sep 2018 14:14:35: 39000000 INFO @ Tue, 04 Sep 2018 14:14:39: 49000000 INFO @ Tue, 04 Sep 2018 14:14:41: 38000000 INFO @ Tue, 04 Sep 2018 14:14:45: 40000000 INFO @ Tue, 04 Sep 2018 14:14:47: 50000000 INFO @ Tue, 04 Sep 2018 14:14:52: 39000000 INFO @ Tue, 04 Sep 2018 14:14:54: 41000000 INFO @ Tue, 04 Sep 2018 14:14:55: 51000000 INFO @ Tue, 04 Sep 2018 14:15:02: 40000000 INFO @ Tue, 04 Sep 2018 14:15:03: 52000000 INFO @ Tue, 04 Sep 2018 14:15:04: 42000000 INFO @ Tue, 04 Sep 2018 14:15:11: 53000000 INFO @ Tue, 04 Sep 2018 14:15:12: 41000000 INFO @ Tue, 04 Sep 2018 14:15:14: 43000000 INFO @ Tue, 04 Sep 2018 14:15:18: 54000000 INFO @ Tue, 04 Sep 2018 14:15:22: 42000000 INFO @ Tue, 04 Sep 2018 14:15:24: 44000000 INFO @ Tue, 04 Sep 2018 14:15:26: 55000000 INFO @ Tue, 04 Sep 2018 14:15:32: 43000000 INFO @ Tue, 04 Sep 2018 14:15:33: 45000000 INFO @ Tue, 04 Sep 2018 14:15:34: 56000000 INFO @ Tue, 04 Sep 2018 14:15:42: 57000000 INFO @ Tue, 04 Sep 2018 14:15:42: 44000000 INFO @ Tue, 04 Sep 2018 14:15:43: 46000000 INFO @ Tue, 04 Sep 2018 14:15:50: 58000000 INFO @ Tue, 04 Sep 2018 14:15:52: 45000000 INFO @ Tue, 04 Sep 2018 14:15:53: 47000000 INFO @ Tue, 04 Sep 2018 14:15:58: 59000000 INFO @ Tue, 04 Sep 2018 14:16:02: 48000000 INFO @ Tue, 04 Sep 2018 14:16:03: 46000000 INFO @ Tue, 04 Sep 2018 14:16:06: 60000000 INFO @ Tue, 04 Sep 2018 14:16:12: 49000000 INFO @ Tue, 04 Sep 2018 14:16:13: 47000000 INFO @ Tue, 04 Sep 2018 14:16:14: 61000000 INFO @ Tue, 04 Sep 2018 14:16:21: 62000000 INFO @ Tue, 04 Sep 2018 14:16:22: 50000000 INFO @ Tue, 04 Sep 2018 14:16:23: 48000000 INFO @ Tue, 04 Sep 2018 14:16:29: 63000000 INFO @ Tue, 04 Sep 2018 14:16:31: 51000000 INFO @ Tue, 04 Sep 2018 14:16:33: 49000000 INFO @ Tue, 04 Sep 2018 14:16:37: 64000000 INFO @ Tue, 04 Sep 2018 14:16:41: 52000000 INFO @ Tue, 04 Sep 2018 14:16:43: 50000000 INFO @ Tue, 04 Sep 2018 14:16:45: 65000000 INFO @ Tue, 04 Sep 2018 14:16:51: 53000000 INFO @ Tue, 04 Sep 2018 14:16:53: 66000000 INFO @ Tue, 04 Sep 2018 14:16:53: 51000000 INFO @ Tue, 04 Sep 2018 14:17:01: 54000000 INFO @ Tue, 04 Sep 2018 14:17:01: 67000000 INFO @ Tue, 04 Sep 2018 14:17:03: 52000000 INFO @ Tue, 04 Sep 2018 14:17:09: 68000000 INFO @ Tue, 04 Sep 2018 14:17:10: 55000000 INFO @ Tue, 04 Sep 2018 14:17:13: 53000000 INFO @ Tue, 04 Sep 2018 14:17:17: 69000000 INFO @ Tue, 04 Sep 2018 14:17:20: 56000000 INFO @ Tue, 04 Sep 2018 14:17:23: 54000000 INFO @ Tue, 04 Sep 2018 14:17:25: 70000000 INFO @ Tue, 04 Sep 2018 14:17:30: 57000000 INFO @ Tue, 04 Sep 2018 14:17:33: 71000000 INFO @ Tue, 04 Sep 2018 14:17:33: 55000000 INFO @ Tue, 04 Sep 2018 14:17:40: 58000000 INFO @ Tue, 04 Sep 2018 14:17:41: 72000000 INFO @ Tue, 04 Sep 2018 14:17:43: 56000000 INFO @ Tue, 04 Sep 2018 14:17:48: 73000000 INFO @ Tue, 04 Sep 2018 14:17:49: 59000000 INFO @ Tue, 04 Sep 2018 14:17:54: 57000000 INFO @ Tue, 04 Sep 2018 14:17:56: 74000000 INFO @ Tue, 04 Sep 2018 14:17:59: 60000000 INFO @ Tue, 04 Sep 2018 14:18:04: 58000000 INFO @ Tue, 04 Sep 2018 14:18:04: 75000000 INFO @ Tue, 04 Sep 2018 14:18:09: 61000000 INFO @ Tue, 04 Sep 2018 14:18:12: 76000000 INFO @ Tue, 04 Sep 2018 14:18:14: 59000000 INFO @ Tue, 04 Sep 2018 14:18:19: 62000000 INFO @ Tue, 04 Sep 2018 14:18:20: 77000000 INFO @ Tue, 04 Sep 2018 14:18:24: 60000000 INFO @ Tue, 04 Sep 2018 14:18:28: 78000000 INFO @ Tue, 04 Sep 2018 14:18:28: 63000000 INFO @ Tue, 04 Sep 2018 14:18:34: 61000000 INFO @ Tue, 04 Sep 2018 14:18:36: 79000000 INFO @ Tue, 04 Sep 2018 14:18:38: 64000000 INFO @ Tue, 04 Sep 2018 14:18:44: 80000000 INFO @ Tue, 04 Sep 2018 14:18:44: 62000000 INFO @ Tue, 04 Sep 2018 14:18:48: 65000000 INFO @ Tue, 04 Sep 2018 14:18:52: 81000000 INFO @ Tue, 04 Sep 2018 14:18:54: 63000000 INFO @ Tue, 04 Sep 2018 14:18:58: 66000000 INFO @ Tue, 04 Sep 2018 14:19:00: 82000000 INFO @ Tue, 04 Sep 2018 14:19:04: 64000000 INFO @ Tue, 04 Sep 2018 14:19:07: 67000000 INFO @ Tue, 04 Sep 2018 14:19:08: 83000000 INFO @ Tue, 04 Sep 2018 14:19:15: 65000000 INFO @ Tue, 04 Sep 2018 14:19:16: 84000000 INFO @ Tue, 04 Sep 2018 14:19:17: 68000000 INFO @ Tue, 04 Sep 2018 14:19:24: 85000000 INFO @ Tue, 04 Sep 2018 14:19:25: 66000000 INFO @ Tue, 04 Sep 2018 14:19:27: 69000000 INFO @ Tue, 04 Sep 2018 14:19:32: 86000000 INFO @ Tue, 04 Sep 2018 14:19:35: 67000000 INFO @ Tue, 04 Sep 2018 14:19:37: 70000000 INFO @ Tue, 04 Sep 2018 14:19:40: 87000000 INFO @ Tue, 04 Sep 2018 14:19:45: 68000000 INFO @ Tue, 04 Sep 2018 14:19:46: 71000000 INFO @ Tue, 04 Sep 2018 14:19:47: 88000000 INFO @ Tue, 04 Sep 2018 14:19:55: 89000000 INFO @ Tue, 04 Sep 2018 14:19:55: 69000000 INFO @ Tue, 04 Sep 2018 14:19:56: 72000000 INFO @ Tue, 04 Sep 2018 14:20:03: 90000000 INFO @ Tue, 04 Sep 2018 14:20:06: 70000000 INFO @ Tue, 04 Sep 2018 14:20:06: 73000000 INFO @ Tue, 04 Sep 2018 14:20:11: 91000000 INFO @ Tue, 04 Sep 2018 14:20:16: 71000000 INFO @ Tue, 04 Sep 2018 14:20:16: 74000000 INFO @ Tue, 04 Sep 2018 14:20:19: 92000000 INFO @ Tue, 04 Sep 2018 14:20:25: 75000000 INFO @ Tue, 04 Sep 2018 14:20:26: 72000000 INFO @ Tue, 04 Sep 2018 14:20:27: 93000000 INFO @ Tue, 04 Sep 2018 14:20:35: 94000000 INFO @ Tue, 04 Sep 2018 14:20:35: 76000000 INFO @ Tue, 04 Sep 2018 14:20:36: 73000000 INFO @ Tue, 04 Sep 2018 14:20:43: 95000000 INFO @ Tue, 04 Sep 2018 14:20:45: 77000000 INFO @ Tue, 04 Sep 2018 14:20:46: 74000000 INFO @ Tue, 04 Sep 2018 14:20:51: 96000000 INFO @ Tue, 04 Sep 2018 14:20:55: 78000000 INFO @ Tue, 04 Sep 2018 14:20:56: 75000000 INFO @ Tue, 04 Sep 2018 14:20:59: 97000000 INFO @ Tue, 04 Sep 2018 14:21:04: 79000000 INFO @ Tue, 04 Sep 2018 14:21:07: 98000000 INFO @ Tue, 04 Sep 2018 14:21:07: 76000000 INFO @ Tue, 04 Sep 2018 14:21:14: 80000000 INFO @ Tue, 04 Sep 2018 14:21:14: 99000000 INFO @ Tue, 04 Sep 2018 14:21:17: 77000000 INFO @ Tue, 04 Sep 2018 14:21:22: 100000000 INFO @ Tue, 04 Sep 2018 14:21:24: 81000000 INFO @ Tue, 04 Sep 2018 14:21:27: 78000000 INFO @ Tue, 04 Sep 2018 14:21:30: 101000000 INFO @ Tue, 04 Sep 2018 14:21:34: 82000000 INFO @ Tue, 04 Sep 2018 14:21:37: 79000000 INFO @ Tue, 04 Sep 2018 14:21:38: 102000000 INFO @ Tue, 04 Sep 2018 14:21:43: 83000000 INFO @ Tue, 04 Sep 2018 14:21:46: 103000000 INFO @ Tue, 04 Sep 2018 14:21:47: 80000000 INFO @ Tue, 04 Sep 2018 14:21:53: 84000000 INFO @ Tue, 04 Sep 2018 14:21:54: 104000000 INFO @ Tue, 04 Sep 2018 14:21:58: 81000000 INFO @ Tue, 04 Sep 2018 14:22:02: 105000000 INFO @ Tue, 04 Sep 2018 14:22:03: 85000000 INFO @ Tue, 04 Sep 2018 14:22:08: 82000000 INFO @ Tue, 04 Sep 2018 14:22:09: 106000000 INFO @ Tue, 04 Sep 2018 14:22:13: 86000000 INFO @ Tue, 04 Sep 2018 14:22:17: 107000000 INFO @ Tue, 04 Sep 2018 14:22:18: 83000000 INFO @ Tue, 04 Sep 2018 14:22:22: 87000000 INFO @ Tue, 04 Sep 2018 14:22:25: 108000000 INFO @ Tue, 04 Sep 2018 14:22:29: 84000000 INFO @ Tue, 04 Sep 2018 14:22:32: 88000000 INFO @ Tue, 04 Sep 2018 14:22:33: 109000000 INFO @ Tue, 04 Sep 2018 14:22:40: 85000000 INFO @ Tue, 04 Sep 2018 14:22:41: 110000000 INFO @ Tue, 04 Sep 2018 14:22:42: 89000000 INFO @ Tue, 04 Sep 2018 14:22:49: 111000000 INFO @ Tue, 04 Sep 2018 14:22:51: 86000000 INFO @ Tue, 04 Sep 2018 14:22:52: 90000000 INFO @ Tue, 04 Sep 2018 14:22:57: 112000000 INFO @ Tue, 04 Sep 2018 14:23:02: 87000000 INFO @ Tue, 04 Sep 2018 14:23:02: 91000000 INFO @ Tue, 04 Sep 2018 14:23:05: 113000000 INFO @ Tue, 04 Sep 2018 14:23:12: 92000000 INFO @ Tue, 04 Sep 2018 14:23:12: 88000000 INFO @ Tue, 04 Sep 2018 14:23:12: 114000000 INFO @ Tue, 04 Sep 2018 14:23:20: 115000000 INFO @ Tue, 04 Sep 2018 14:23:22: 93000000 INFO @ Tue, 04 Sep 2018 14:23:23: 89000000 INFO @ Tue, 04 Sep 2018 14:23:28: 116000000 INFO @ Tue, 04 Sep 2018 14:23:32: 94000000 INFO @ Tue, 04 Sep 2018 14:23:34: 90000000 INFO @ Tue, 04 Sep 2018 14:23:36: 117000000 INFO @ Tue, 04 Sep 2018 14:23:38: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:23:38: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:23:38: #1 total tags in treatment: 52227506 INFO @ Tue, 04 Sep 2018 14:23:38: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:23:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:23:40: #1 tags after filtering in treatment: 34612927 INFO @ Tue, 04 Sep 2018 14:23:40: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 04 Sep 2018 14:23:40: #1 finished! INFO @ Tue, 04 Sep 2018 14:23:40: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:23:40: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:23:42: 95000000 INFO @ Tue, 04 Sep 2018 14:23:42: #2 number of paired peaks: 1719 INFO @ Tue, 04 Sep 2018 14:23:42: start model_add_line... INFO @ Tue, 04 Sep 2018 14:23:43: start X-correlation... INFO @ Tue, 04 Sep 2018 14:23:43: end of X-cor INFO @ Tue, 04 Sep 2018 14:23:43: #2 finished! INFO @ Tue, 04 Sep 2018 14:23:43: #2 predicted fragment length is 202 bps INFO @ Tue, 04 Sep 2018 14:23:43: #2 alternative fragment length(s) may be 202 bps INFO @ Tue, 04 Sep 2018 14:23:43: #2.2 Generate R script for model : SRX3141080.20_model.r INFO @ Tue, 04 Sep 2018 14:23:43: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:23:43: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:23:45: 91000000 INFO @ Tue, 04 Sep 2018 14:23:52: 96000000 INFO @ Tue, 04 Sep 2018 14:23:55: 92000000 INFO @ Tue, 04 Sep 2018 14:24:02: 97000000 INFO @ Tue, 04 Sep 2018 14:24:06: 93000000 INFO @ Tue, 04 Sep 2018 14:24:12: 98000000 INFO @ Tue, 04 Sep 2018 14:24:16: 94000000 INFO @ Tue, 04 Sep 2018 14:24:22: 99000000 INFO @ Tue, 04 Sep 2018 14:24:27: 95000000 INFO @ Tue, 04 Sep 2018 14:24:33: 100000000 INFO @ Tue, 04 Sep 2018 14:24:37: 96000000 INFO @ Tue, 04 Sep 2018 14:24:43: 101000000 INFO @ Tue, 04 Sep 2018 14:24:48: 97000000 INFO @ Tue, 04 Sep 2018 14:24:53: 102000000 INFO @ Tue, 04 Sep 2018 14:24:58: 98000000 INFO @ Tue, 04 Sep 2018 14:25:03: 103000000 INFO @ Tue, 04 Sep 2018 14:25:09: 99000000 INFO @ Tue, 04 Sep 2018 14:25:13: 104000000 INFO @ Tue, 04 Sep 2018 14:25:19: 100000000 INFO @ Tue, 04 Sep 2018 14:25:24: 105000000 INFO @ Tue, 04 Sep 2018 14:25:25: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:25:30: 101000000 INFO @ Tue, 04 Sep 2018 14:25:34: 106000000 INFO @ Tue, 04 Sep 2018 14:25:41: 102000000 INFO @ Tue, 04 Sep 2018 14:25:44: 107000000 INFO @ Tue, 04 Sep 2018 14:25:51: 103000000 INFO @ Tue, 04 Sep 2018 14:25:54: 108000000 INFO @ Tue, 04 Sep 2018 14:26:00: #4 Write output xls file... SRX3141080.20_peaks.xls INFO @ Tue, 04 Sep 2018 14:26:00: #4 Write peak in narrowPeak format file... SRX3141080.20_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:26:00: #4 Write summits bed file... SRX3141080.20_summits.bed INFO @ Tue, 04 Sep 2018 14:26:00: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (8711 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 14:26:02: 104000000 INFO @ Tue, 04 Sep 2018 14:26:04: 109000000 INFO @ Tue, 04 Sep 2018 14:26:10: 105000000 INFO @ Tue, 04 Sep 2018 14:26:13: 110000000 INFO @ Tue, 04 Sep 2018 14:26:18: 106000000 INFO @ Tue, 04 Sep 2018 14:26:21: 111000000 INFO @ Tue, 04 Sep 2018 14:26:25: 107000000 INFO @ Tue, 04 Sep 2018 14:26:30: 112000000 INFO @ Tue, 04 Sep 2018 14:26:33: 108000000 INFO @ Tue, 04 Sep 2018 14:26:38: 113000000 INFO @ Tue, 04 Sep 2018 14:26:41: 109000000 INFO @ Tue, 04 Sep 2018 14:26:46: 114000000 INFO @ Tue, 04 Sep 2018 14:26:48: 110000000 INFO @ Tue, 04 Sep 2018 14:26:55: 115000000 INFO @ Tue, 04 Sep 2018 14:26:56: 111000000 INFO @ Tue, 04 Sep 2018 14:27:03: 116000000 INFO @ Tue, 04 Sep 2018 14:27:04: 112000000 INFO @ Tue, 04 Sep 2018 14:27:11: 113000000 INFO @ Tue, 04 Sep 2018 14:27:12: 117000000 INFO @ Tue, 04 Sep 2018 14:27:14: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:27:14: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:27:14: #1 total tags in treatment: 52227506 INFO @ Tue, 04 Sep 2018 14:27:14: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:27:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:27:16: #1 tags after filtering in treatment: 34612927 INFO @ Tue, 04 Sep 2018 14:27:16: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 04 Sep 2018 14:27:16: #1 finished! INFO @ Tue, 04 Sep 2018 14:27:16: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:27:16: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:27:18: #2 number of paired peaks: 1719 INFO @ Tue, 04 Sep 2018 14:27:18: start model_add_line... INFO @ Tue, 04 Sep 2018 14:27:19: start X-correlation... INFO @ Tue, 04 Sep 2018 14:27:19: end of X-cor INFO @ Tue, 04 Sep 2018 14:27:19: #2 finished! INFO @ Tue, 04 Sep 2018 14:27:19: #2 predicted fragment length is 202 bps INFO @ Tue, 04 Sep 2018 14:27:19: #2 alternative fragment length(s) may be 202 bps INFO @ Tue, 04 Sep 2018 14:27:19: #2.2 Generate R script for model : SRX3141080.05_model.r INFO @ Tue, 04 Sep 2018 14:27:19: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:27:19: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:27:19: 114000000 INFO @ Tue, 04 Sep 2018 14:27:26: 115000000 INFO @ Tue, 04 Sep 2018 14:27:34: 116000000 INFO @ Tue, 04 Sep 2018 14:27:42: 117000000 INFO @ Tue, 04 Sep 2018 14:27:44: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:27:44: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:27:44: #1 total tags in treatment: 52227506 INFO @ Tue, 04 Sep 2018 14:27:44: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:27:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:27:46: #1 tags after filtering in treatment: 34612927 INFO @ Tue, 04 Sep 2018 14:27:46: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 04 Sep 2018 14:27:46: #1 finished! INFO @ Tue, 04 Sep 2018 14:27:46: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:27:46: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:27:48: #2 number of paired peaks: 1719 INFO @ Tue, 04 Sep 2018 14:27:48: start model_add_line... INFO @ Tue, 04 Sep 2018 14:27:48: start X-correlation... INFO @ Tue, 04 Sep 2018 14:27:48: end of X-cor INFO @ Tue, 04 Sep 2018 14:27:48: #2 finished! INFO @ Tue, 04 Sep 2018 14:27:48: #2 predicted fragment length is 202 bps INFO @ Tue, 04 Sep 2018 14:27:48: #2 alternative fragment length(s) may be 202 bps INFO @ Tue, 04 Sep 2018 14:27:48: #2.2 Generate R script for model : SRX3141080.10_model.r INFO @ Tue, 04 Sep 2018 14:27:48: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:27:48: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:29:00: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:29:30: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:29:37: #4 Write output xls file... SRX3141080.05_peaks.xls INFO @ Tue, 04 Sep 2018 14:29:37: #4 Write peak in narrowPeak format file... SRX3141080.05_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:29:37: #4 Write summits bed file... SRX3141080.05_summits.bed INFO @ Tue, 04 Sep 2018 14:29:37: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (14787 records, 4 fields): 19 millis CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 14:30:04: #4 Write output xls file... SRX3141080.10_peaks.xls INFO @ Tue, 04 Sep 2018 14:30:04: #4 Write peak in narrowPeak format file... SRX3141080.10_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:30:05: #4 Write summits bed file... SRX3141080.10_summits.bed INFO @ Tue, 04 Sep 2018 14:30:05: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (12071 records, 4 fields): 16 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。