Job ID = 11158471 sra ファイルのダウンロード中... Completed: 5293540K bytes transferred in 214 seconds (202540K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 82693554 spots for /home/okishinya/chipatlas/results/dm3/SRX3141079/SRR5985085.sra Written 82693554 spots for /home/okishinya/chipatlas/results/dm3/SRX3141079/SRR5985085.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:04:44 82693554 reads; of these: 82693554 (100.00%) were paired; of these: 13207932 (15.97%) aligned concordantly 0 times 57452949 (69.48%) aligned concordantly exactly 1 time 12032673 (14.55%) aligned concordantly >1 times ---- 13207932 pairs aligned concordantly 0 times; of these: 1409398 (10.67%) aligned discordantly 1 time ---- 11798534 pairs aligned 0 times concordantly or discordantly; of these: 23597068 mates make up the pairs; of these: 14535744 (61.60%) aligned 0 times 6388380 (27.07%) aligned exactly 1 time 2672944 (11.33%) aligned >1 times 91.21% overall alignment rate Time searching: 03:04:44 Overall time: 03:04:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 64 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 21633377 / 70871217 = 0.3052 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 04 Sep 2018 13:53:21: # Command line: callpeak -t SRX3141079.bam -f BAM -g dm -n SRX3141079.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3141079.05 # format = BAM # ChIP-seq file = ['SRX3141079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 13:53:21: # Command line: callpeak -t SRX3141079.bam -f BAM -g dm -n SRX3141079.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3141079.20 # format = BAM # ChIP-seq file = ['SRX3141079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 13:53:21: #1 read tag files... INFO @ Tue, 04 Sep 2018 13:53:21: #1 read tag files... INFO @ Tue, 04 Sep 2018 13:53:21: # Command line: callpeak -t SRX3141079.bam -f BAM -g dm -n SRX3141079.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3141079.10 # format = BAM # ChIP-seq file = ['SRX3141079.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 13:53:21: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 13:53:21: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 13:53:21: #1 read tag files... INFO @ Tue, 04 Sep 2018 13:53:21: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 13:53:28: 1000000 INFO @ Tue, 04 Sep 2018 13:53:28: 1000000 INFO @ Tue, 04 Sep 2018 13:53:28: 1000000 INFO @ Tue, 04 Sep 2018 13:53:35: 2000000 INFO @ Tue, 04 Sep 2018 13:53:35: 2000000 INFO @ Tue, 04 Sep 2018 13:53:35: 2000000 INFO @ Tue, 04 Sep 2018 13:53:43: 3000000 INFO @ Tue, 04 Sep 2018 13:53:43: 3000000 INFO @ Tue, 04 Sep 2018 13:53:43: 3000000 INFO @ Tue, 04 Sep 2018 13:53:50: 4000000 INFO @ Tue, 04 Sep 2018 13:53:50: 4000000 INFO @ Tue, 04 Sep 2018 13:53:50: 4000000 INFO @ Tue, 04 Sep 2018 13:53:57: 5000000 INFO @ Tue, 04 Sep 2018 13:53:57: 5000000 INFO @ Tue, 04 Sep 2018 13:53:58: 5000000 INFO @ Tue, 04 Sep 2018 13:54:04: 6000000 INFO @ Tue, 04 Sep 2018 13:54:05: 6000000 INFO @ Tue, 04 Sep 2018 13:54:06: 6000000 INFO @ Tue, 04 Sep 2018 13:54:11: 7000000 INFO @ Tue, 04 Sep 2018 13:54:13: 7000000 INFO @ Tue, 04 Sep 2018 13:54:13: 7000000 INFO @ Tue, 04 Sep 2018 13:54:18: 8000000 INFO @ Tue, 04 Sep 2018 13:54:21: 8000000 INFO @ Tue, 04 Sep 2018 13:54:21: 8000000 INFO @ Tue, 04 Sep 2018 13:54:25: 9000000 INFO @ Tue, 04 Sep 2018 13:54:28: 9000000 INFO @ Tue, 04 Sep 2018 13:54:29: 9000000 INFO @ Tue, 04 Sep 2018 13:54:32: 10000000 INFO @ Tue, 04 Sep 2018 13:54:36: 10000000 INFO @ Tue, 04 Sep 2018 13:54:37: 10000000 INFO @ Tue, 04 Sep 2018 13:54:39: 11000000 INFO @ Tue, 04 Sep 2018 13:54:44: 11000000 INFO @ Tue, 04 Sep 2018 13:54:45: 11000000 INFO @ Tue, 04 Sep 2018 13:54:46: 12000000 INFO @ Tue, 04 Sep 2018 13:54:52: 12000000 INFO @ Tue, 04 Sep 2018 13:54:53: 13000000 INFO @ Tue, 04 Sep 2018 13:54:53: 12000000 INFO @ Tue, 04 Sep 2018 13:54:59: 13000000 INFO @ Tue, 04 Sep 2018 13:55:00: 14000000 INFO @ Tue, 04 Sep 2018 13:55:01: 13000000 INFO @ Tue, 04 Sep 2018 13:55:07: 15000000 INFO @ Tue, 04 Sep 2018 13:55:07: 14000000 INFO @ Tue, 04 Sep 2018 13:55:09: 14000000 INFO @ Tue, 04 Sep 2018 13:55:14: 16000000 INFO @ Tue, 04 Sep 2018 13:55:15: 15000000 INFO @ Tue, 04 Sep 2018 13:55:17: 15000000 INFO @ Tue, 04 Sep 2018 13:55:21: 17000000 INFO @ Tue, 04 Sep 2018 13:55:23: 16000000 INFO @ Tue, 04 Sep 2018 13:55:25: 16000000 INFO @ Tue, 04 Sep 2018 13:55:28: 18000000 INFO @ Tue, 04 Sep 2018 13:55:30: 17000000 INFO @ Tue, 04 Sep 2018 13:55:32: 17000000 INFO @ Tue, 04 Sep 2018 13:55:35: 19000000 INFO @ Tue, 04 Sep 2018 13:55:38: 18000000 INFO @ Tue, 04 Sep 2018 13:55:40: 18000000 INFO @ Tue, 04 Sep 2018 13:55:42: 20000000 INFO @ Tue, 04 Sep 2018 13:55:45: 19000000 INFO @ Tue, 04 Sep 2018 13:55:48: 19000000 INFO @ Tue, 04 Sep 2018 13:55:49: 21000000 INFO @ Tue, 04 Sep 2018 13:55:53: 20000000 INFO @ Tue, 04 Sep 2018 13:55:56: 20000000 INFO @ Tue, 04 Sep 2018 13:55:56: 22000000 INFO @ Tue, 04 Sep 2018 13:56:01: 21000000 INFO @ Tue, 04 Sep 2018 13:56:03: 23000000 INFO @ Tue, 04 Sep 2018 13:56:03: 21000000 INFO @ Tue, 04 Sep 2018 13:56:08: 22000000 INFO @ Tue, 04 Sep 2018 13:56:10: 24000000 INFO @ Tue, 04 Sep 2018 13:56:11: 22000000 INFO @ Tue, 04 Sep 2018 13:56:16: 23000000 INFO @ Tue, 04 Sep 2018 13:56:17: 25000000 INFO @ Tue, 04 Sep 2018 13:56:18: 23000000 INFO @ Tue, 04 Sep 2018 13:56:24: 26000000 INFO @ Tue, 04 Sep 2018 13:56:24: 24000000 INFO @ Tue, 04 Sep 2018 13:56:26: 24000000 INFO @ Tue, 04 Sep 2018 13:56:31: 27000000 INFO @ Tue, 04 Sep 2018 13:56:31: 25000000 INFO @ Tue, 04 Sep 2018 13:56:33: 25000000 INFO @ Tue, 04 Sep 2018 13:56:38: 28000000 INFO @ Tue, 04 Sep 2018 13:56:39: 26000000 INFO @ Tue, 04 Sep 2018 13:56:41: 26000000 INFO @ Tue, 04 Sep 2018 13:56:45: 29000000 INFO @ Tue, 04 Sep 2018 13:56:47: 27000000 INFO @ Tue, 04 Sep 2018 13:56:48: 27000000 INFO @ Tue, 04 Sep 2018 13:56:52: 30000000 INFO @ Tue, 04 Sep 2018 13:56:55: 28000000 INFO @ Tue, 04 Sep 2018 13:56:56: 28000000 INFO @ Tue, 04 Sep 2018 13:56:59: 31000000 INFO @ Tue, 04 Sep 2018 13:57:02: 29000000 INFO @ Tue, 04 Sep 2018 13:57:04: 29000000 INFO @ Tue, 04 Sep 2018 13:57:06: 32000000 INFO @ Tue, 04 Sep 2018 13:57:10: 30000000 INFO @ Tue, 04 Sep 2018 13:57:11: 30000000 INFO @ Tue, 04 Sep 2018 13:57:13: 33000000 INFO @ Tue, 04 Sep 2018 13:57:18: 31000000 INFO @ Tue, 04 Sep 2018 13:57:19: 31000000 INFO @ Tue, 04 Sep 2018 13:57:21: 34000000 INFO @ Tue, 04 Sep 2018 13:57:26: 32000000 INFO @ Tue, 04 Sep 2018 13:57:27: 32000000 INFO @ Tue, 04 Sep 2018 13:57:28: 35000000 INFO @ Tue, 04 Sep 2018 13:57:34: 33000000 INFO @ Tue, 04 Sep 2018 13:57:35: 33000000 INFO @ Tue, 04 Sep 2018 13:57:35: 36000000 INFO @ Tue, 04 Sep 2018 13:57:42: 34000000 INFO @ Tue, 04 Sep 2018 13:57:42: 37000000 INFO @ Tue, 04 Sep 2018 13:57:43: 34000000 INFO @ Tue, 04 Sep 2018 13:57:49: 38000000 INFO @ Tue, 04 Sep 2018 13:57:49: 35000000 INFO @ Tue, 04 Sep 2018 13:57:50: 35000000 INFO @ Tue, 04 Sep 2018 13:57:56: 39000000 INFO @ Tue, 04 Sep 2018 13:57:57: 36000000 INFO @ Tue, 04 Sep 2018 13:57:58: 36000000 INFO @ Tue, 04 Sep 2018 13:58:04: 40000000 INFO @ Tue, 04 Sep 2018 13:58:05: 37000000 INFO @ Tue, 04 Sep 2018 13:58:06: 37000000 INFO @ Tue, 04 Sep 2018 13:58:11: 41000000 INFO @ Tue, 04 Sep 2018 13:58:13: 38000000 INFO @ Tue, 04 Sep 2018 13:58:13: 38000000 INFO @ Tue, 04 Sep 2018 13:58:18: 42000000 INFO @ Tue, 04 Sep 2018 13:58:21: 39000000 INFO @ Tue, 04 Sep 2018 13:58:21: 39000000 INFO @ Tue, 04 Sep 2018 13:58:25: 43000000 INFO @ Tue, 04 Sep 2018 13:58:28: 40000000 INFO @ Tue, 04 Sep 2018 13:58:29: 40000000 INFO @ Tue, 04 Sep 2018 13:58:32: 44000000 INFO @ Tue, 04 Sep 2018 13:58:36: 41000000 INFO @ Tue, 04 Sep 2018 13:58:36: 41000000 INFO @ Tue, 04 Sep 2018 13:58:39: 45000000 INFO @ Tue, 04 Sep 2018 13:58:43: 42000000 INFO @ Tue, 04 Sep 2018 13:58:44: 42000000 INFO @ Tue, 04 Sep 2018 13:58:46: 46000000 INFO @ Tue, 04 Sep 2018 13:58:51: 43000000 INFO @ Tue, 04 Sep 2018 13:58:51: 43000000 INFO @ Tue, 04 Sep 2018 13:58:53: 47000000 INFO @ Tue, 04 Sep 2018 13:58:58: 44000000 INFO @ Tue, 04 Sep 2018 13:58:58: 44000000 INFO @ Tue, 04 Sep 2018 13:59:01: 48000000 INFO @ Tue, 04 Sep 2018 13:59:05: 45000000 INFO @ Tue, 04 Sep 2018 13:59:06: 45000000 INFO @ Tue, 04 Sep 2018 13:59:08: 49000000 INFO @ Tue, 04 Sep 2018 13:59:13: 46000000 INFO @ Tue, 04 Sep 2018 13:59:13: 46000000 INFO @ Tue, 04 Sep 2018 13:59:15: 50000000 INFO @ Tue, 04 Sep 2018 13:59:20: 47000000 INFO @ Tue, 04 Sep 2018 13:59:20: 47000000 INFO @ Tue, 04 Sep 2018 13:59:22: 51000000 INFO @ Tue, 04 Sep 2018 13:59:27: 48000000 INFO @ Tue, 04 Sep 2018 13:59:27: 48000000 INFO @ Tue, 04 Sep 2018 13:59:29: 52000000 INFO @ Tue, 04 Sep 2018 13:59:35: 49000000 INFO @ Tue, 04 Sep 2018 13:59:35: 49000000 INFO @ Tue, 04 Sep 2018 13:59:37: 53000000 INFO @ Tue, 04 Sep 2018 13:59:42: 50000000 INFO @ Tue, 04 Sep 2018 13:59:42: 50000000 INFO @ Tue, 04 Sep 2018 13:59:44: 54000000 INFO @ Tue, 04 Sep 2018 13:59:50: 51000000 INFO @ Tue, 04 Sep 2018 13:59:50: 51000000 INFO @ Tue, 04 Sep 2018 13:59:51: 55000000 INFO @ Tue, 04 Sep 2018 13:59:57: 52000000 INFO @ Tue, 04 Sep 2018 13:59:57: 52000000 INFO @ Tue, 04 Sep 2018 13:59:58: 56000000 INFO @ Tue, 04 Sep 2018 14:00:05: 53000000 INFO @ Tue, 04 Sep 2018 14:00:05: 53000000 INFO @ Tue, 04 Sep 2018 14:00:06: 57000000 INFO @ Tue, 04 Sep 2018 14:00:12: 54000000 INFO @ Tue, 04 Sep 2018 14:00:12: 54000000 INFO @ Tue, 04 Sep 2018 14:00:13: 58000000 INFO @ Tue, 04 Sep 2018 14:00:20: 55000000 INFO @ Tue, 04 Sep 2018 14:00:20: 55000000 INFO @ Tue, 04 Sep 2018 14:00:20: 59000000 INFO @ Tue, 04 Sep 2018 14:00:27: 60000000 INFO @ Tue, 04 Sep 2018 14:00:27: 56000000 INFO @ Tue, 04 Sep 2018 14:00:27: 56000000 INFO @ Tue, 04 Sep 2018 14:00:34: 61000000 INFO @ Tue, 04 Sep 2018 14:00:35: 57000000 INFO @ Tue, 04 Sep 2018 14:00:35: 57000000 INFO @ Tue, 04 Sep 2018 14:00:42: 62000000 INFO @ Tue, 04 Sep 2018 14:00:42: 58000000 INFO @ Tue, 04 Sep 2018 14:00:42: 58000000 INFO @ Tue, 04 Sep 2018 14:00:49: 63000000 INFO @ Tue, 04 Sep 2018 14:00:50: 59000000 INFO @ Tue, 04 Sep 2018 14:00:50: 59000000 INFO @ Tue, 04 Sep 2018 14:00:56: 64000000 INFO @ Tue, 04 Sep 2018 14:00:57: 60000000 INFO @ Tue, 04 Sep 2018 14:00:57: 60000000 INFO @ Tue, 04 Sep 2018 14:01:03: 65000000 INFO @ Tue, 04 Sep 2018 14:01:05: 61000000 INFO @ Tue, 04 Sep 2018 14:01:05: 61000000 INFO @ Tue, 04 Sep 2018 14:01:11: 66000000 INFO @ Tue, 04 Sep 2018 14:01:12: 62000000 INFO @ Tue, 04 Sep 2018 14:01:12: 62000000 INFO @ Tue, 04 Sep 2018 14:01:18: 67000000 INFO @ Tue, 04 Sep 2018 14:01:20: 63000000 INFO @ Tue, 04 Sep 2018 14:01:20: 63000000 INFO @ Tue, 04 Sep 2018 14:01:25: 68000000 INFO @ Tue, 04 Sep 2018 14:01:28: 64000000 INFO @ Tue, 04 Sep 2018 14:01:28: 64000000 INFO @ Tue, 04 Sep 2018 14:01:32: 69000000 INFO @ Tue, 04 Sep 2018 14:01:35: 65000000 INFO @ Tue, 04 Sep 2018 14:01:35: 65000000 INFO @ Tue, 04 Sep 2018 14:01:39: 70000000 INFO @ Tue, 04 Sep 2018 14:01:42: 66000000 INFO @ Tue, 04 Sep 2018 14:01:42: 66000000 INFO @ Tue, 04 Sep 2018 14:01:46: 71000000 INFO @ Tue, 04 Sep 2018 14:01:50: 67000000 INFO @ Tue, 04 Sep 2018 14:01:50: 67000000 INFO @ Tue, 04 Sep 2018 14:01:54: 72000000 INFO @ Tue, 04 Sep 2018 14:01:57: 68000000 INFO @ Tue, 04 Sep 2018 14:01:57: 68000000 INFO @ Tue, 04 Sep 2018 14:02:01: 73000000 INFO @ Tue, 04 Sep 2018 14:02:04: 69000000 INFO @ Tue, 04 Sep 2018 14:02:04: 69000000 INFO @ Tue, 04 Sep 2018 14:02:08: 74000000 INFO @ Tue, 04 Sep 2018 14:02:12: 70000000 INFO @ Tue, 04 Sep 2018 14:02:12: 70000000 INFO @ Tue, 04 Sep 2018 14:02:15: 75000000 INFO @ Tue, 04 Sep 2018 14:02:19: 71000000 INFO @ Tue, 04 Sep 2018 14:02:21: 71000000 INFO @ Tue, 04 Sep 2018 14:02:22: 76000000 INFO @ Tue, 04 Sep 2018 14:02:27: 72000000 INFO @ Tue, 04 Sep 2018 14:02:29: 72000000 INFO @ Tue, 04 Sep 2018 14:02:29: 77000000 INFO @ Tue, 04 Sep 2018 14:02:35: 73000000 INFO @ Tue, 04 Sep 2018 14:02:36: 78000000 INFO @ Tue, 04 Sep 2018 14:02:37: 73000000 INFO @ Tue, 04 Sep 2018 14:02:42: 74000000 INFO @ Tue, 04 Sep 2018 14:02:43: 79000000 INFO @ Tue, 04 Sep 2018 14:02:45: 74000000 INFO @ Tue, 04 Sep 2018 14:02:50: 75000000 INFO @ Tue, 04 Sep 2018 14:02:51: 80000000 INFO @ Tue, 04 Sep 2018 14:02:53: 75000000 INFO @ Tue, 04 Sep 2018 14:02:58: 81000000 INFO @ Tue, 04 Sep 2018 14:02:58: 76000000 INFO @ Tue, 04 Sep 2018 14:03:00: 76000000 INFO @ Tue, 04 Sep 2018 14:03:05: 82000000 INFO @ Tue, 04 Sep 2018 14:03:05: 77000000 INFO @ Tue, 04 Sep 2018 14:03:08: 77000000 INFO @ Tue, 04 Sep 2018 14:03:12: 83000000 INFO @ Tue, 04 Sep 2018 14:03:13: 78000000 INFO @ Tue, 04 Sep 2018 14:03:16: 78000000 INFO @ Tue, 04 Sep 2018 14:03:19: 84000000 INFO @ Tue, 04 Sep 2018 14:03:21: 79000000 INFO @ Tue, 04 Sep 2018 14:03:24: 79000000 INFO @ Tue, 04 Sep 2018 14:03:26: 85000000 INFO @ Tue, 04 Sep 2018 14:03:28: 80000000 INFO @ Tue, 04 Sep 2018 14:03:31: 80000000 INFO @ Tue, 04 Sep 2018 14:03:33: 86000000 INFO @ Tue, 04 Sep 2018 14:03:36: 81000000 INFO @ Tue, 04 Sep 2018 14:03:39: 81000000 INFO @ Tue, 04 Sep 2018 14:03:41: 87000000 INFO @ Tue, 04 Sep 2018 14:03:43: 82000000 INFO @ Tue, 04 Sep 2018 14:03:46: 82000000 INFO @ Tue, 04 Sep 2018 14:03:48: 88000000 INFO @ Tue, 04 Sep 2018 14:03:51: 83000000 INFO @ Tue, 04 Sep 2018 14:03:54: 83000000 INFO @ Tue, 04 Sep 2018 14:03:55: 89000000 INFO @ Tue, 04 Sep 2018 14:03:58: 84000000 INFO @ Tue, 04 Sep 2018 14:04:02: 84000000 INFO @ Tue, 04 Sep 2018 14:04:02: 90000000 INFO @ Tue, 04 Sep 2018 14:04:06: 85000000 INFO @ Tue, 04 Sep 2018 14:04:09: 91000000 INFO @ Tue, 04 Sep 2018 14:04:09: 85000000 INFO @ Tue, 04 Sep 2018 14:04:14: 86000000 INFO @ Tue, 04 Sep 2018 14:04:16: 92000000 INFO @ Tue, 04 Sep 2018 14:04:17: 86000000 INFO @ Tue, 04 Sep 2018 14:04:22: 87000000 INFO @ Tue, 04 Sep 2018 14:04:24: 93000000 INFO @ Tue, 04 Sep 2018 14:04:25: 87000000 INFO @ Tue, 04 Sep 2018 14:04:29: 88000000 INFO @ Tue, 04 Sep 2018 14:04:31: 94000000 INFO @ Tue, 04 Sep 2018 14:04:33: 88000000 INFO @ Tue, 04 Sep 2018 14:04:37: 89000000 INFO @ Tue, 04 Sep 2018 14:04:38: 95000000 INFO @ Tue, 04 Sep 2018 14:04:41: 89000000 INFO @ Tue, 04 Sep 2018 14:04:45: 90000000 INFO @ Tue, 04 Sep 2018 14:04:45: 96000000 INFO @ Tue, 04 Sep 2018 14:04:49: 90000000 INFO @ Tue, 04 Sep 2018 14:04:52: 97000000 INFO @ Tue, 04 Sep 2018 14:04:52: 91000000 INFO @ Tue, 04 Sep 2018 14:04:56: 91000000 INFO @ Tue, 04 Sep 2018 14:04:59: 98000000 INFO @ Tue, 04 Sep 2018 14:05:00: 92000000 INFO @ Tue, 04 Sep 2018 14:05:04: 92000000 INFO @ Tue, 04 Sep 2018 14:05:07: 99000000 INFO @ Tue, 04 Sep 2018 14:05:08: 93000000 INFO @ Tue, 04 Sep 2018 14:05:12: 93000000 INFO @ Tue, 04 Sep 2018 14:05:14: 100000000 INFO @ Tue, 04 Sep 2018 14:05:15: 94000000 INFO @ Tue, 04 Sep 2018 14:05:19: 94000000 INFO @ Tue, 04 Sep 2018 14:05:21: 101000000 INFO @ Tue, 04 Sep 2018 14:05:22: 95000000 INFO @ Tue, 04 Sep 2018 14:05:27: 95000000 INFO @ Tue, 04 Sep 2018 14:05:28: 102000000 INFO @ Tue, 04 Sep 2018 14:05:30: 96000000 INFO @ Tue, 04 Sep 2018 14:05:34: 96000000 INFO @ Tue, 04 Sep 2018 14:05:35: 103000000 INFO @ Tue, 04 Sep 2018 14:05:38: 97000000 INFO @ Tue, 04 Sep 2018 14:05:42: 97000000 INFO @ Tue, 04 Sep 2018 14:05:43: 104000000 INFO @ Tue, 04 Sep 2018 14:05:45: 98000000 INFO @ Tue, 04 Sep 2018 14:05:50: 98000000 INFO @ Tue, 04 Sep 2018 14:05:50: 105000000 INFO @ Tue, 04 Sep 2018 14:05:53: 99000000 INFO @ Tue, 04 Sep 2018 14:05:57: 106000000 INFO @ Tue, 04 Sep 2018 14:05:57: 99000000 INFO @ Tue, 04 Sep 2018 14:06:01: 100000000 INFO @ Tue, 04 Sep 2018 14:06:04: 107000000 INFO @ Tue, 04 Sep 2018 14:06:05: 100000000 INFO @ Tue, 04 Sep 2018 14:06:09: 101000000 INFO @ Tue, 04 Sep 2018 14:06:09: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:06:09: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:06:09: #1 total tags in treatment: 48003070 INFO @ Tue, 04 Sep 2018 14:06:09: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:06:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:06:10: #1 tags after filtering in treatment: 31095663 INFO @ Tue, 04 Sep 2018 14:06:10: #1 Redundant rate of treatment: 0.35 INFO @ Tue, 04 Sep 2018 14:06:10: #1 finished! INFO @ Tue, 04 Sep 2018 14:06:10: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:06:10: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:06:13: 101000000 INFO @ Tue, 04 Sep 2018 14:06:13: #2 number of paired peaks: 3152 INFO @ Tue, 04 Sep 2018 14:06:13: start model_add_line... INFO @ Tue, 04 Sep 2018 14:06:13: start X-correlation... INFO @ Tue, 04 Sep 2018 14:06:14: end of X-cor INFO @ Tue, 04 Sep 2018 14:06:14: #2 finished! INFO @ Tue, 04 Sep 2018 14:06:14: #2 predicted fragment length is 222 bps INFO @ Tue, 04 Sep 2018 14:06:14: #2 alternative fragment length(s) may be 222 bps INFO @ Tue, 04 Sep 2018 14:06:14: #2.2 Generate R script for model : SRX3141079.05_model.r INFO @ Tue, 04 Sep 2018 14:06:14: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:06:14: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:06:16: 102000000 INFO @ Tue, 04 Sep 2018 14:06:20: 102000000 INFO @ Tue, 04 Sep 2018 14:06:24: 103000000 INFO @ Tue, 04 Sep 2018 14:06:28: 103000000 INFO @ Tue, 04 Sep 2018 14:06:32: 104000000 INFO @ Tue, 04 Sep 2018 14:06:36: 104000000 INFO @ Tue, 04 Sep 2018 14:06:40: 105000000 INFO @ Tue, 04 Sep 2018 14:06:44: 105000000 INFO @ Tue, 04 Sep 2018 14:06:48: 106000000 INFO @ Tue, 04 Sep 2018 14:06:51: 106000000 INFO @ Tue, 04 Sep 2018 14:06:56: 107000000 INFO @ Tue, 04 Sep 2018 14:06:59: 107000000 INFO @ Tue, 04 Sep 2018 14:07:02: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:07:02: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:07:02: #1 total tags in treatment: 48003070 INFO @ Tue, 04 Sep 2018 14:07:02: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:07:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:07:03: #1 tags after filtering in treatment: 31095663 INFO @ Tue, 04 Sep 2018 14:07:03: #1 Redundant rate of treatment: 0.35 INFO @ Tue, 04 Sep 2018 14:07:03: #1 finished! INFO @ Tue, 04 Sep 2018 14:07:03: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:07:03: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:07:04: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 14:07:04: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 14:07:04: #1 total tags in treatment: 48003070 INFO @ Tue, 04 Sep 2018 14:07:04: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 14:07:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 14:07:05: #1 tags after filtering in treatment: 31095663 INFO @ Tue, 04 Sep 2018 14:07:05: #1 Redundant rate of treatment: 0.35 INFO @ Tue, 04 Sep 2018 14:07:05: #1 finished! INFO @ Tue, 04 Sep 2018 14:07:05: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 14:07:05: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 14:07:06: #2 number of paired peaks: 3152 INFO @ Tue, 04 Sep 2018 14:07:06: start model_add_line... INFO @ Tue, 04 Sep 2018 14:07:06: start X-correlation... INFO @ Tue, 04 Sep 2018 14:07:06: end of X-cor INFO @ Tue, 04 Sep 2018 14:07:06: #2 finished! INFO @ Tue, 04 Sep 2018 14:07:06: #2 predicted fragment length is 222 bps INFO @ Tue, 04 Sep 2018 14:07:06: #2 alternative fragment length(s) may be 222 bps INFO @ Tue, 04 Sep 2018 14:07:06: #2.2 Generate R script for model : SRX3141079.10_model.r INFO @ Tue, 04 Sep 2018 14:07:06: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:07:06: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:07:08: #2 number of paired peaks: 3152 INFO @ Tue, 04 Sep 2018 14:07:08: start model_add_line... INFO @ Tue, 04 Sep 2018 14:07:08: start X-correlation... INFO @ Tue, 04 Sep 2018 14:07:08: end of X-cor INFO @ Tue, 04 Sep 2018 14:07:08: #2 finished! INFO @ Tue, 04 Sep 2018 14:07:08: #2 predicted fragment length is 222 bps INFO @ Tue, 04 Sep 2018 14:07:08: #2 alternative fragment length(s) may be 222 bps INFO @ Tue, 04 Sep 2018 14:07:08: #2.2 Generate R script for model : SRX3141079.20_model.r INFO @ Tue, 04 Sep 2018 14:07:08: #3 Call peaks... INFO @ Tue, 04 Sep 2018 14:07:08: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 04 Sep 2018 14:07:51: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:08:24: #4 Write output xls file... SRX3141079.05_peaks.xls INFO @ Tue, 04 Sep 2018 14:08:24: #4 Write peak in narrowPeak format file... SRX3141079.05_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:08:24: #4 Write summits bed file... SRX3141079.05_summits.bed INFO @ Tue, 04 Sep 2018 14:08:24: Done! pass1 - making usageList (14 chroms): 5 millis pass2 - checking and writing primary data (14285 records, 4 fields): 22 millis CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 14:08:51: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:08:51: #3 Call peaks for each chromosome... INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write output xls file... SRX3141079.10_peaks.xls INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write output xls file... SRX3141079.20_peaks.xls INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write peak in narrowPeak format file... SRX3141079.10_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write peak in narrowPeak format file... SRX3141079.20_peaks.narrowPeak INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write summits bed file... SRX3141079.20_summits.bed INFO @ Tue, 04 Sep 2018 14:09:24: #4 Write summits bed file... SRX3141079.10_summits.bed INFO @ Tue, 04 Sep 2018 14:09:24: Done! INFO @ Tue, 04 Sep 2018 14:09:24: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (9224 records, 4 fields): 15 millis CompletedMACS2peakCalling pass1 - making usageList (14 chroms): 5 millis pass2 - checking and writing primary data (12027 records, 4 fields): 20 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。