Job ID = 11158470 sra ファイルのダウンロード中... Completed: 6000944K bytes transferred in 229 seconds (213980K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 94665470 spots for /home/okishinya/chipatlas/results/dm3/SRX3141078/SRR5985084.sra Written 94665470 spots for /home/okishinya/chipatlas/results/dm3/SRX3141078/SRR5985084.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 05:22:36 94665470 reads; of these: 94665470 (100.00%) were paired; of these: 16601652 (17.54%) aligned concordantly 0 times 54187498 (57.24%) aligned concordantly exactly 1 time 23876320 (25.22%) aligned concordantly >1 times ---- 16601652 pairs aligned concordantly 0 times; of these: 815254 (4.91%) aligned discordantly 1 time ---- 15786398 pairs aligned 0 times concordantly or discordantly; of these: 31572796 mates make up the pairs; of these: 19861319 (62.91%) aligned 0 times 7046038 (22.32%) aligned exactly 1 time 4665439 (14.78%) aligned >1 times 89.51% overall alignment rate Time searching: 05:22:37 Overall time: 05:22:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 72 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 18448605 / 78814358 = 0.2341 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 04 Sep 2018 16:28:03: # Command line: callpeak -t SRX3141078.bam -f BAM -g dm -n SRX3141078.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3141078.20 # format = BAM # ChIP-seq file = ['SRX3141078.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 16:28:03: #1 read tag files... INFO @ Tue, 04 Sep 2018 16:28:03: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 16:28:03: # Command line: callpeak -t SRX3141078.bam -f BAM -g dm -n SRX3141078.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3141078.05 # format = BAM # ChIP-seq file = ['SRX3141078.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 16:28:03: #1 read tag files... INFO @ Tue, 04 Sep 2018 16:28:03: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 16:28:03: # Command line: callpeak -t SRX3141078.bam -f BAM -g dm -n SRX3141078.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3141078.10 # format = BAM # ChIP-seq file = ['SRX3141078.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 04 Sep 2018 16:28:03: #1 read tag files... INFO @ Tue, 04 Sep 2018 16:28:03: #1 read treatment tags... INFO @ Tue, 04 Sep 2018 16:28:09: 1000000 INFO @ Tue, 04 Sep 2018 16:28:09: 1000000 INFO @ Tue, 04 Sep 2018 16:28:09: 1000000 INFO @ Tue, 04 Sep 2018 16:28:16: 2000000 INFO @ Tue, 04 Sep 2018 16:28:16: 2000000 INFO @ Tue, 04 Sep 2018 16:28:16: 2000000 INFO @ Tue, 04 Sep 2018 16:28:23: 3000000 INFO @ Tue, 04 Sep 2018 16:28:23: 3000000 INFO @ Tue, 04 Sep 2018 16:28:23: 3000000 INFO @ Tue, 04 Sep 2018 16:28:29: 4000000 INFO @ Tue, 04 Sep 2018 16:28:29: 4000000 INFO @ Tue, 04 Sep 2018 16:28:30: 4000000 INFO @ Tue, 04 Sep 2018 16:28:36: 5000000 INFO @ Tue, 04 Sep 2018 16:28:36: 5000000 INFO @ Tue, 04 Sep 2018 16:28:36: 5000000 INFO @ Tue, 04 Sep 2018 16:28:43: 6000000 INFO @ Tue, 04 Sep 2018 16:28:43: 6000000 INFO @ Tue, 04 Sep 2018 16:28:43: 6000000 INFO @ Tue, 04 Sep 2018 16:28:49: 7000000 INFO @ Tue, 04 Sep 2018 16:28:50: 7000000 INFO @ Tue, 04 Sep 2018 16:28:50: 7000000 INFO @ Tue, 04 Sep 2018 16:28:56: 8000000 INFO @ Tue, 04 Sep 2018 16:28:56: 8000000 INFO @ Tue, 04 Sep 2018 16:28:56: 8000000 INFO @ Tue, 04 Sep 2018 16:29:03: 9000000 INFO @ Tue, 04 Sep 2018 16:29:03: 9000000 INFO @ Tue, 04 Sep 2018 16:29:03: 9000000 INFO @ Tue, 04 Sep 2018 16:29:10: 10000000 INFO @ Tue, 04 Sep 2018 16:29:10: 10000000 INFO @ Tue, 04 Sep 2018 16:29:10: 10000000 INFO @ Tue, 04 Sep 2018 16:29:16: 11000000 INFO @ Tue, 04 Sep 2018 16:29:16: 11000000 INFO @ Tue, 04 Sep 2018 16:29:17: 11000000 INFO @ Tue, 04 Sep 2018 16:29:23: 12000000 INFO @ Tue, 04 Sep 2018 16:29:23: 12000000 INFO @ Tue, 04 Sep 2018 16:29:23: 12000000 INFO @ Tue, 04 Sep 2018 16:29:30: 13000000 INFO @ Tue, 04 Sep 2018 16:29:30: 13000000 INFO @ Tue, 04 Sep 2018 16:29:30: 13000000 INFO @ Tue, 04 Sep 2018 16:29:36: 14000000 INFO @ Tue, 04 Sep 2018 16:29:36: 14000000 INFO @ Tue, 04 Sep 2018 16:29:37: 14000000 INFO @ Tue, 04 Sep 2018 16:29:43: 15000000 INFO @ Tue, 04 Sep 2018 16:29:43: 15000000 INFO @ Tue, 04 Sep 2018 16:29:43: 15000000 INFO @ Tue, 04 Sep 2018 16:29:50: 16000000 INFO @ Tue, 04 Sep 2018 16:29:50: 16000000 INFO @ Tue, 04 Sep 2018 16:29:50: 16000000 INFO @ Tue, 04 Sep 2018 16:29:57: 17000000 INFO @ Tue, 04 Sep 2018 16:29:57: 17000000 INFO @ Tue, 04 Sep 2018 16:29:57: 17000000 INFO @ Tue, 04 Sep 2018 16:30:03: 18000000 INFO @ Tue, 04 Sep 2018 16:30:03: 18000000 INFO @ Tue, 04 Sep 2018 16:30:03: 18000000 INFO @ Tue, 04 Sep 2018 16:30:10: 19000000 INFO @ Tue, 04 Sep 2018 16:30:10: 19000000 INFO @ Tue, 04 Sep 2018 16:30:10: 19000000 INFO @ Tue, 04 Sep 2018 16:30:17: 20000000 INFO @ Tue, 04 Sep 2018 16:30:17: 20000000 INFO @ Tue, 04 Sep 2018 16:30:17: 20000000 INFO @ Tue, 04 Sep 2018 16:30:23: 21000000 INFO @ Tue, 04 Sep 2018 16:30:23: 21000000 INFO @ Tue, 04 Sep 2018 16:30:24: 21000000 INFO @ Tue, 04 Sep 2018 16:30:30: 22000000 INFO @ Tue, 04 Sep 2018 16:30:30: 22000000 INFO @ Tue, 04 Sep 2018 16:30:30: 22000000 INFO @ Tue, 04 Sep 2018 16:30:37: 23000000 INFO @ Tue, 04 Sep 2018 16:30:37: 23000000 INFO @ Tue, 04 Sep 2018 16:30:37: 23000000 INFO @ Tue, 04 Sep 2018 16:30:43: 24000000 INFO @ Tue, 04 Sep 2018 16:30:43: 24000000 INFO @ Tue, 04 Sep 2018 16:30:44: 24000000 INFO @ Tue, 04 Sep 2018 16:30:50: 25000000 INFO @ Tue, 04 Sep 2018 16:30:50: 25000000 INFO @ Tue, 04 Sep 2018 16:30:50: 25000000 INFO @ Tue, 04 Sep 2018 16:30:57: 26000000 INFO @ Tue, 04 Sep 2018 16:30:57: 26000000 INFO @ Tue, 04 Sep 2018 16:30:57: 26000000 INFO @ Tue, 04 Sep 2018 16:31:03: 27000000 INFO @ Tue, 04 Sep 2018 16:31:03: 27000000 INFO @ Tue, 04 Sep 2018 16:31:04: 27000000 INFO @ Tue, 04 Sep 2018 16:31:10: 28000000 INFO @ Tue, 04 Sep 2018 16:31:10: 28000000 INFO @ Tue, 04 Sep 2018 16:31:10: 28000000 INFO @ Tue, 04 Sep 2018 16:31:17: 29000000 INFO @ Tue, 04 Sep 2018 16:31:17: 29000000 INFO @ Tue, 04 Sep 2018 16:31:17: 29000000 INFO @ Tue, 04 Sep 2018 16:31:23: 30000000 INFO @ Tue, 04 Sep 2018 16:31:23: 30000000 INFO @ Tue, 04 Sep 2018 16:31:24: 30000000 INFO @ Tue, 04 Sep 2018 16:31:30: 31000000 INFO @ Tue, 04 Sep 2018 16:31:30: 31000000 INFO @ Tue, 04 Sep 2018 16:31:30: 31000000 INFO @ Tue, 04 Sep 2018 16:31:37: 32000000 INFO @ Tue, 04 Sep 2018 16:31:37: 32000000 INFO @ Tue, 04 Sep 2018 16:31:37: 32000000 INFO @ Tue, 04 Sep 2018 16:31:43: 33000000 INFO @ Tue, 04 Sep 2018 16:31:43: 33000000 INFO @ Tue, 04 Sep 2018 16:31:44: 33000000 INFO @ Tue, 04 Sep 2018 16:31:50: 34000000 INFO @ Tue, 04 Sep 2018 16:31:50: 34000000 INFO @ Tue, 04 Sep 2018 16:31:50: 34000000 INFO @ Tue, 04 Sep 2018 16:31:57: 35000000 INFO @ Tue, 04 Sep 2018 16:31:57: 35000000 INFO @ Tue, 04 Sep 2018 16:31:57: 35000000 INFO @ Tue, 04 Sep 2018 16:32:04: 36000000 INFO @ Tue, 04 Sep 2018 16:32:04: 36000000 INFO @ Tue, 04 Sep 2018 16:32:04: 36000000 INFO @ Tue, 04 Sep 2018 16:32:10: 37000000 INFO @ Tue, 04 Sep 2018 16:32:11: 37000000 INFO @ Tue, 04 Sep 2018 16:32:11: 37000000 INFO @ Tue, 04 Sep 2018 16:32:17: 38000000 INFO @ Tue, 04 Sep 2018 16:32:17: 38000000 INFO @ Tue, 04 Sep 2018 16:32:18: 38000000 INFO @ Tue, 04 Sep 2018 16:32:24: 39000000 INFO @ Tue, 04 Sep 2018 16:32:24: 39000000 INFO @ Tue, 04 Sep 2018 16:32:25: 39000000 INFO @ Tue, 04 Sep 2018 16:32:31: 40000000 INFO @ Tue, 04 Sep 2018 16:32:31: 40000000 INFO @ Tue, 04 Sep 2018 16:32:31: 40000000 INFO @ Tue, 04 Sep 2018 16:32:38: 41000000 INFO @ Tue, 04 Sep 2018 16:32:38: 41000000 INFO @ Tue, 04 Sep 2018 16:32:38: 41000000 INFO @ Tue, 04 Sep 2018 16:32:44: 42000000 INFO @ Tue, 04 Sep 2018 16:32:45: 42000000 INFO @ Tue, 04 Sep 2018 16:32:45: 42000000 INFO @ Tue, 04 Sep 2018 16:32:51: 43000000 INFO @ Tue, 04 Sep 2018 16:32:52: 43000000 INFO @ Tue, 04 Sep 2018 16:32:53: 43000000 INFO @ Tue, 04 Sep 2018 16:32:58: 44000000 INFO @ Tue, 04 Sep 2018 16:32:59: 44000000 INFO @ Tue, 04 Sep 2018 16:33:00: 44000000 INFO @ Tue, 04 Sep 2018 16:33:04: 45000000 INFO @ Tue, 04 Sep 2018 16:33:06: 45000000 INFO @ Tue, 04 Sep 2018 16:33:07: 45000000 INFO @ Tue, 04 Sep 2018 16:33:11: 46000000 INFO @ Tue, 04 Sep 2018 16:33:13: 46000000 INFO @ Tue, 04 Sep 2018 16:33:14: 46000000 INFO @ Tue, 04 Sep 2018 16:33:17: 47000000 INFO @ Tue, 04 Sep 2018 16:33:20: 47000000 INFO @ Tue, 04 Sep 2018 16:33:21: 47000000 INFO @ Tue, 04 Sep 2018 16:33:24: 48000000 INFO @ Tue, 04 Sep 2018 16:33:27: 48000000 INFO @ Tue, 04 Sep 2018 16:33:28: 48000000 INFO @ Tue, 04 Sep 2018 16:33:31: 49000000 INFO @ Tue, 04 Sep 2018 16:33:34: 49000000 INFO @ Tue, 04 Sep 2018 16:33:35: 49000000 INFO @ Tue, 04 Sep 2018 16:33:37: 50000000 INFO @ Tue, 04 Sep 2018 16:33:42: 50000000 INFO @ Tue, 04 Sep 2018 16:33:42: 50000000 INFO @ Tue, 04 Sep 2018 16:33:44: 51000000 INFO @ Tue, 04 Sep 2018 16:33:49: 51000000 INFO @ Tue, 04 Sep 2018 16:33:49: 51000000 INFO @ Tue, 04 Sep 2018 16:33:50: 52000000 INFO @ Tue, 04 Sep 2018 16:33:56: 52000000 INFO @ Tue, 04 Sep 2018 16:33:57: 52000000 INFO @ Tue, 04 Sep 2018 16:33:57: 53000000 INFO @ Tue, 04 Sep 2018 16:34:03: 53000000 INFO @ Tue, 04 Sep 2018 16:34:03: 54000000 INFO @ Tue, 04 Sep 2018 16:34:04: 53000000 INFO @ Tue, 04 Sep 2018 16:34:10: 54000000 INFO @ Tue, 04 Sep 2018 16:34:10: 55000000 INFO @ Tue, 04 Sep 2018 16:34:11: 54000000 INFO @ Tue, 04 Sep 2018 16:34:17: 56000000 INFO @ Tue, 04 Sep 2018 16:34:17: 55000000 INFO @ Tue, 04 Sep 2018 16:34:18: 55000000 INFO @ Tue, 04 Sep 2018 16:34:23: 57000000 INFO @ Tue, 04 Sep 2018 16:34:24: 56000000 INFO @ Tue, 04 Sep 2018 16:34:25: 56000000 INFO @ Tue, 04 Sep 2018 16:34:30: 58000000 INFO @ Tue, 04 Sep 2018 16:34:31: 57000000 INFO @ Tue, 04 Sep 2018 16:34:32: 57000000 INFO @ Tue, 04 Sep 2018 16:34:36: 59000000 INFO @ Tue, 04 Sep 2018 16:34:38: 58000000 INFO @ Tue, 04 Sep 2018 16:34:40: 58000000 INFO @ Tue, 04 Sep 2018 16:34:43: 60000000 INFO @ Tue, 04 Sep 2018 16:34:45: 59000000 INFO @ Tue, 04 Sep 2018 16:34:47: 59000000 INFO @ Tue, 04 Sep 2018 16:34:50: 61000000 INFO @ Tue, 04 Sep 2018 16:34:52: 60000000 INFO @ Tue, 04 Sep 2018 16:34:54: 60000000 INFO @ Tue, 04 Sep 2018 16:34:56: 62000000 INFO @ Tue, 04 Sep 2018 16:34:59: 61000000 INFO @ Tue, 04 Sep 2018 16:35:01: 61000000 INFO @ Tue, 04 Sep 2018 16:35:03: 63000000 INFO @ Tue, 04 Sep 2018 16:35:06: 62000000 INFO @ Tue, 04 Sep 2018 16:35:08: 62000000 INFO @ Tue, 04 Sep 2018 16:35:10: 64000000 INFO @ Tue, 04 Sep 2018 16:35:13: 63000000 INFO @ Tue, 04 Sep 2018 16:35:15: 63000000 INFO @ Tue, 04 Sep 2018 16:35:16: 65000000 INFO @ Tue, 04 Sep 2018 16:35:20: 64000000 INFO @ Tue, 04 Sep 2018 16:35:23: 64000000 INFO @ Tue, 04 Sep 2018 16:35:23: 66000000 INFO @ Tue, 04 Sep 2018 16:35:28: 65000000 INFO @ Tue, 04 Sep 2018 16:35:30: 67000000 INFO @ Tue, 04 Sep 2018 16:35:30: 65000000 INFO @ Tue, 04 Sep 2018 16:35:35: 66000000 INFO @ Tue, 04 Sep 2018 16:35:36: 68000000 INFO @ Tue, 04 Sep 2018 16:35:37: 66000000 INFO @ Tue, 04 Sep 2018 16:35:42: 67000000 INFO @ Tue, 04 Sep 2018 16:35:43: 69000000 INFO @ Tue, 04 Sep 2018 16:35:45: 67000000 INFO @ Tue, 04 Sep 2018 16:35:49: 68000000 INFO @ Tue, 04 Sep 2018 16:35:50: 70000000 INFO @ Tue, 04 Sep 2018 16:35:52: 68000000 INFO @ Tue, 04 Sep 2018 16:35:56: 71000000 INFO @ Tue, 04 Sep 2018 16:35:57: 69000000 INFO @ Tue, 04 Sep 2018 16:35:59: 69000000 INFO @ Tue, 04 Sep 2018 16:36:03: 72000000 INFO @ Tue, 04 Sep 2018 16:36:04: 70000000 INFO @ Tue, 04 Sep 2018 16:36:06: 70000000 INFO @ Tue, 04 Sep 2018 16:36:09: 73000000 INFO @ Tue, 04 Sep 2018 16:36:11: 71000000 INFO @ Tue, 04 Sep 2018 16:36:14: 71000000 INFO @ Tue, 04 Sep 2018 16:36:16: 74000000 INFO @ Tue, 04 Sep 2018 16:36:18: 72000000 INFO @ Tue, 04 Sep 2018 16:36:21: 72000000 INFO @ Tue, 04 Sep 2018 16:36:23: 75000000 INFO @ Tue, 04 Sep 2018 16:36:25: 73000000 INFO @ Tue, 04 Sep 2018 16:36:28: 73000000 INFO @ Tue, 04 Sep 2018 16:36:29: 76000000 INFO @ Tue, 04 Sep 2018 16:36:32: 74000000 INFO @ Tue, 04 Sep 2018 16:36:35: 74000000 INFO @ Tue, 04 Sep 2018 16:36:36: 77000000 INFO @ Tue, 04 Sep 2018 16:36:39: 75000000 INFO @ Tue, 04 Sep 2018 16:36:42: 78000000 INFO @ Tue, 04 Sep 2018 16:36:42: 75000000 INFO @ Tue, 04 Sep 2018 16:36:47: 76000000 INFO @ Tue, 04 Sep 2018 16:36:49: 79000000 INFO @ Tue, 04 Sep 2018 16:36:50: 76000000 INFO @ Tue, 04 Sep 2018 16:36:54: 77000000 INFO @ Tue, 04 Sep 2018 16:36:56: 80000000 INFO @ Tue, 04 Sep 2018 16:36:57: 77000000 INFO @ Tue, 04 Sep 2018 16:37:01: 78000000 INFO @ Tue, 04 Sep 2018 16:37:02: 81000000 INFO @ Tue, 04 Sep 2018 16:37:04: 78000000 INFO @ Tue, 04 Sep 2018 16:37:08: 79000000 INFO @ Tue, 04 Sep 2018 16:37:09: 82000000 INFO @ Tue, 04 Sep 2018 16:37:11: 79000000 INFO @ Tue, 04 Sep 2018 16:37:15: 80000000 INFO @ Tue, 04 Sep 2018 16:37:15: 83000000 INFO @ Tue, 04 Sep 2018 16:37:18: 80000000 INFO @ Tue, 04 Sep 2018 16:37:22: 84000000 INFO @ Tue, 04 Sep 2018 16:37:22: 81000000 INFO @ Tue, 04 Sep 2018 16:37:25: 81000000 INFO @ Tue, 04 Sep 2018 16:37:28: 85000000 INFO @ Tue, 04 Sep 2018 16:37:29: 82000000 INFO @ Tue, 04 Sep 2018 16:37:32: 82000000 INFO @ Tue, 04 Sep 2018 16:37:35: 86000000 INFO @ Tue, 04 Sep 2018 16:37:36: 83000000 INFO @ Tue, 04 Sep 2018 16:37:39: 83000000 INFO @ Tue, 04 Sep 2018 16:37:41: 87000000 INFO @ Tue, 04 Sep 2018 16:37:43: 84000000 INFO @ Tue, 04 Sep 2018 16:37:47: 84000000 INFO @ Tue, 04 Sep 2018 16:37:48: 88000000 INFO @ Tue, 04 Sep 2018 16:37:50: 85000000 INFO @ Tue, 04 Sep 2018 16:37:54: 85000000 INFO @ Tue, 04 Sep 2018 16:37:55: 89000000 INFO @ Tue, 04 Sep 2018 16:37:57: 86000000 INFO @ Tue, 04 Sep 2018 16:38:01: 86000000 INFO @ Tue, 04 Sep 2018 16:38:01: 90000000 INFO @ Tue, 04 Sep 2018 16:38:04: 87000000 INFO @ Tue, 04 Sep 2018 16:38:08: 91000000 INFO @ Tue, 04 Sep 2018 16:38:08: 87000000 INFO @ Tue, 04 Sep 2018 16:38:11: 88000000 INFO @ Tue, 04 Sep 2018 16:38:14: 92000000 INFO @ Tue, 04 Sep 2018 16:38:15: 88000000 INFO @ Tue, 04 Sep 2018 16:38:18: 89000000 INFO @ Tue, 04 Sep 2018 16:38:21: 93000000 INFO @ Tue, 04 Sep 2018 16:38:22: 89000000 INFO @ Tue, 04 Sep 2018 16:38:25: 90000000 INFO @ Tue, 04 Sep 2018 16:38:27: 94000000 INFO @ Tue, 04 Sep 2018 16:38:29: 90000000 INFO @ Tue, 04 Sep 2018 16:38:32: 91000000 INFO @ Tue, 04 Sep 2018 16:38:34: 95000000 INFO @ Tue, 04 Sep 2018 16:38:36: 91000000 INFO @ Tue, 04 Sep 2018 16:38:39: 92000000 INFO @ Tue, 04 Sep 2018 16:38:41: 96000000 INFO @ Tue, 04 Sep 2018 16:38:43: 92000000 INFO @ Tue, 04 Sep 2018 16:38:46: 93000000 INFO @ Tue, 04 Sep 2018 16:38:47: 97000000 INFO @ Tue, 04 Sep 2018 16:38:51: 93000000 INFO @ Tue, 04 Sep 2018 16:38:53: 94000000 INFO @ Tue, 04 Sep 2018 16:38:54: 98000000 INFO @ Tue, 04 Sep 2018 16:38:58: 94000000 INFO @ Tue, 04 Sep 2018 16:39:00: 95000000 INFO @ Tue, 04 Sep 2018 16:39:01: 99000000 INFO @ Tue, 04 Sep 2018 16:39:05: 95000000 INFO @ Tue, 04 Sep 2018 16:39:07: 96000000 INFO @ Tue, 04 Sep 2018 16:39:07: 100000000 INFO @ Tue, 04 Sep 2018 16:39:12: 96000000 INFO @ Tue, 04 Sep 2018 16:39:14: 101000000 INFO @ Tue, 04 Sep 2018 16:39:14: 97000000 INFO @ Tue, 04 Sep 2018 16:39:19: 97000000 INFO @ Tue, 04 Sep 2018 16:39:20: 102000000 INFO @ Tue, 04 Sep 2018 16:39:21: 98000000 INFO @ Tue, 04 Sep 2018 16:39:26: 98000000 INFO @ Tue, 04 Sep 2018 16:39:27: 103000000 INFO @ Tue, 04 Sep 2018 16:39:28: 99000000 INFO @ Tue, 04 Sep 2018 16:39:33: 104000000 INFO @ Tue, 04 Sep 2018 16:39:34: 99000000 INFO @ Tue, 04 Sep 2018 16:39:36: 100000000 INFO @ Tue, 04 Sep 2018 16:39:40: 105000000 INFO @ Tue, 04 Sep 2018 16:39:41: 100000000 INFO @ Tue, 04 Sep 2018 16:39:43: 101000000 INFO @ Tue, 04 Sep 2018 16:39:47: 106000000 INFO @ Tue, 04 Sep 2018 16:39:48: 101000000 INFO @ Tue, 04 Sep 2018 16:39:50: 102000000 INFO @ Tue, 04 Sep 2018 16:39:53: 107000000 INFO @ Tue, 04 Sep 2018 16:39:55: 102000000 INFO @ Tue, 04 Sep 2018 16:39:57: 103000000 INFO @ Tue, 04 Sep 2018 16:40:00: 108000000 INFO @ Tue, 04 Sep 2018 16:40:02: 103000000 INFO @ Tue, 04 Sep 2018 16:40:04: 104000000 INFO @ Tue, 04 Sep 2018 16:40:06: 109000000 INFO @ Tue, 04 Sep 2018 16:40:09: 104000000 INFO @ Tue, 04 Sep 2018 16:40:11: 105000000 INFO @ Tue, 04 Sep 2018 16:40:13: 110000000 INFO @ Tue, 04 Sep 2018 16:40:16: 105000000 INFO @ Tue, 04 Sep 2018 16:40:18: 106000000 INFO @ Tue, 04 Sep 2018 16:40:20: 111000000 INFO @ Tue, 04 Sep 2018 16:40:23: 106000000 INFO @ Tue, 04 Sep 2018 16:40:25: 107000000 INFO @ Tue, 04 Sep 2018 16:40:26: 112000000 INFO @ Tue, 04 Sep 2018 16:40:31: 107000000 INFO @ Tue, 04 Sep 2018 16:40:32: 108000000 INFO @ Tue, 04 Sep 2018 16:40:33: 113000000 INFO @ Tue, 04 Sep 2018 16:40:38: 108000000 INFO @ Tue, 04 Sep 2018 16:40:39: 109000000 INFO @ Tue, 04 Sep 2018 16:40:39: 114000000 INFO @ Tue, 04 Sep 2018 16:40:45: 109000000 INFO @ Tue, 04 Sep 2018 16:40:46: 110000000 INFO @ Tue, 04 Sep 2018 16:40:46: 115000000 INFO @ Tue, 04 Sep 2018 16:40:52: 110000000 INFO @ Tue, 04 Sep 2018 16:40:53: 116000000 INFO @ Tue, 04 Sep 2018 16:40:53: 111000000 INFO @ Tue, 04 Sep 2018 16:40:59: 117000000 INFO @ Tue, 04 Sep 2018 16:40:59: 111000000 INFO @ Tue, 04 Sep 2018 16:41:00: 112000000 INFO @ Tue, 04 Sep 2018 16:41:06: 118000000 INFO @ Tue, 04 Sep 2018 16:41:06: 112000000 INFO @ Tue, 04 Sep 2018 16:41:07: 113000000 INFO @ Tue, 04 Sep 2018 16:41:12: 119000000 INFO @ Tue, 04 Sep 2018 16:41:13: 113000000 INFO @ Tue, 04 Sep 2018 16:41:14: 114000000 INFO @ Tue, 04 Sep 2018 16:41:18: 120000000 INFO @ Tue, 04 Sep 2018 16:41:21: 114000000 INFO @ Tue, 04 Sep 2018 16:41:21: 115000000 INFO @ Tue, 04 Sep 2018 16:41:25: 121000000 INFO @ Tue, 04 Sep 2018 16:41:28: 115000000 INFO @ Tue, 04 Sep 2018 16:41:28: 116000000 INFO @ Tue, 04 Sep 2018 16:41:31: 122000000 INFO @ Tue, 04 Sep 2018 16:41:35: 116000000 INFO @ Tue, 04 Sep 2018 16:41:35: 117000000 INFO @ Tue, 04 Sep 2018 16:41:38: 123000000 INFO @ Tue, 04 Sep 2018 16:41:42: 117000000 INFO @ Tue, 04 Sep 2018 16:41:42: 118000000 INFO @ Tue, 04 Sep 2018 16:41:44: 124000000 INFO @ Tue, 04 Sep 2018 16:41:49: 119000000 INFO @ Tue, 04 Sep 2018 16:41:49: 118000000 INFO @ Tue, 04 Sep 2018 16:41:51: 125000000 INFO @ Tue, 04 Sep 2018 16:41:55: 120000000 INFO @ Tue, 04 Sep 2018 16:41:56: 119000000 INFO @ Tue, 04 Sep 2018 16:41:57: 126000000 INFO @ Tue, 04 Sep 2018 16:42:02: 121000000 INFO @ Tue, 04 Sep 2018 16:42:02: 120000000 INFO @ Tue, 04 Sep 2018 16:42:04: 127000000 INFO @ Tue, 04 Sep 2018 16:42:09: 122000000 INFO @ Tue, 04 Sep 2018 16:42:09: 121000000 INFO @ Tue, 04 Sep 2018 16:42:11: 128000000 INFO @ Tue, 04 Sep 2018 16:42:16: 123000000 INFO @ Tue, 04 Sep 2018 16:42:17: 122000000 INFO @ Tue, 04 Sep 2018 16:42:17: 129000000 INFO @ Tue, 04 Sep 2018 16:42:23: 124000000 INFO @ Tue, 04 Sep 2018 16:42:24: 123000000 INFO @ Tue, 04 Sep 2018 16:42:24: 130000000 INFO @ Tue, 04 Sep 2018 16:42:30: 125000000 INFO @ Tue, 04 Sep 2018 16:42:30: 131000000 INFO @ Tue, 04 Sep 2018 16:42:31: 124000000 INFO @ Tue, 04 Sep 2018 16:42:37: 132000000 INFO @ Tue, 04 Sep 2018 16:42:37: 126000000 INFO @ Tue, 04 Sep 2018 16:42:38: 125000000 INFO @ Tue, 04 Sep 2018 16:42:41: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 16:42:41: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 16:42:41: #1 total tags in treatment: 59687173 INFO @ Tue, 04 Sep 2018 16:42:41: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 16:42:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 16:42:43: #1 tags after filtering in treatment: 47234237 INFO @ Tue, 04 Sep 2018 16:42:43: #1 Redundant rate of treatment: 0.21 INFO @ Tue, 04 Sep 2018 16:42:43: #1 finished! INFO @ Tue, 04 Sep 2018 16:42:43: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 16:42:43: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 16:42:44: 127000000 INFO @ Tue, 04 Sep 2018 16:42:45: 126000000 INFO @ Tue, 04 Sep 2018 16:42:46: #2 number of paired peaks: 15 WARNING @ Tue, 04 Sep 2018 16:42:46: Too few paired peaks (15) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 04 Sep 2018 16:42:46: Process for pairing-model is terminated! cat: SRX3141078.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 3 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX3141078.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 16:42:51: 128000000 INFO @ Tue, 04 Sep 2018 16:42:52: 127000000 INFO @ Tue, 04 Sep 2018 16:42:58: 129000000 INFO @ Tue, 04 Sep 2018 16:42:59: 128000000 INFO @ Tue, 04 Sep 2018 16:43:05: 130000000 INFO @ Tue, 04 Sep 2018 16:43:06: 129000000 INFO @ Tue, 04 Sep 2018 16:43:12: 131000000 INFO @ Tue, 04 Sep 2018 16:43:13: 130000000 INFO @ Tue, 04 Sep 2018 16:43:19: 132000000 INFO @ Tue, 04 Sep 2018 16:43:20: 131000000 INFO @ Tue, 04 Sep 2018 16:43:24: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 16:43:24: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 16:43:24: #1 total tags in treatment: 59687173 INFO @ Tue, 04 Sep 2018 16:43:24: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 16:43:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 16:43:25: #1 tags after filtering in treatment: 47234237 INFO @ Tue, 04 Sep 2018 16:43:25: #1 Redundant rate of treatment: 0.21 INFO @ Tue, 04 Sep 2018 16:43:25: #1 finished! INFO @ Tue, 04 Sep 2018 16:43:25: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 16:43:25: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 16:43:27: 132000000 INFO @ Tue, 04 Sep 2018 16:43:28: #2 number of paired peaks: 15 WARNING @ Tue, 04 Sep 2018 16:43:28: Too few paired peaks (15) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 04 Sep 2018 16:43:28: Process for pairing-model is terminated! cat: SRX3141078.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 3 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX3141078.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 04 Sep 2018 16:43:31: #1 tag size is determined as 76 bps INFO @ Tue, 04 Sep 2018 16:43:31: #1 tag size = 76 INFO @ Tue, 04 Sep 2018 16:43:31: #1 total tags in treatment: 59687173 INFO @ Tue, 04 Sep 2018 16:43:31: #1 user defined the maximum tags... INFO @ Tue, 04 Sep 2018 16:43:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 04 Sep 2018 16:43:33: #1 tags after filtering in treatment: 47234237 INFO @ Tue, 04 Sep 2018 16:43:33: #1 Redundant rate of treatment: 0.21 INFO @ Tue, 04 Sep 2018 16:43:33: #1 finished! INFO @ Tue, 04 Sep 2018 16:43:33: #2 Build Peak Model... INFO @ Tue, 04 Sep 2018 16:43:33: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 04 Sep 2018 16:43:36: #2 number of paired peaks: 15 WARNING @ Tue, 04 Sep 2018 16:43:36: Too few paired peaks (15) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 04 Sep 2018 16:43:36: Process for pairing-model is terminated! cat: SRX3141078.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 4 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX3141078.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX3141078.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。