Job ID = 12265169 SRX = SRX3104586 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 30936937 spots for SRR5946191/SRR5946191.sra Written 30936937 spots for SRR5946191/SRR5946191.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265618 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:47:54 30936937 reads; of these: 30936937 (100.00%) were paired; of these: 10789407 (34.88%) aligned concordantly 0 times 17707403 (57.24%) aligned concordantly exactly 1 time 2440127 (7.89%) aligned concordantly >1 times ---- 10789407 pairs aligned concordantly 0 times; of these: 3806362 (35.28%) aligned discordantly 1 time ---- 6983045 pairs aligned 0 times concordantly or discordantly; of these: 13966090 mates make up the pairs; of these: 12285835 (87.97%) aligned 0 times 785893 (5.63%) aligned exactly 1 time 894362 (6.40%) aligned >1 times 80.14% overall alignment rate Time searching: 00:47:54 Overall time: 00:47:54 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1822228 / 23748040 = 0.0767 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:44:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:44:30: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:44:30: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:44:41: 1000000 INFO @ Sat, 03 Apr 2021 07:44:53: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:45:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:45:00: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:45:00: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:45:06: 3000000 INFO @ Sat, 03 Apr 2021 07:45:10: 1000000 INFO @ Sat, 03 Apr 2021 07:45:18: 4000000 INFO @ Sat, 03 Apr 2021 07:45:21: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:45:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:45:30: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:45:30: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:45:30: 5000000 INFO @ Sat, 03 Apr 2021 07:45:31: 3000000 INFO @ Sat, 03 Apr 2021 07:45:39: 1000000 INFO @ Sat, 03 Apr 2021 07:45:41: 4000000 INFO @ Sat, 03 Apr 2021 07:45:43: 6000000 INFO @ Sat, 03 Apr 2021 07:45:48: 2000000 INFO @ Sat, 03 Apr 2021 07:45:51: 5000000 INFO @ Sat, 03 Apr 2021 07:45:55: 7000000 INFO @ Sat, 03 Apr 2021 07:45:57: 3000000 INFO @ Sat, 03 Apr 2021 07:46:01: 6000000 INFO @ Sat, 03 Apr 2021 07:46:06: 4000000 INFO @ Sat, 03 Apr 2021 07:46:08: 8000000 INFO @ Sat, 03 Apr 2021 07:46:12: 7000000 INFO @ Sat, 03 Apr 2021 07:46:15: 5000000 INFO @ Sat, 03 Apr 2021 07:46:20: 9000000 INFO @ Sat, 03 Apr 2021 07:46:22: 8000000 INFO @ Sat, 03 Apr 2021 07:46:24: 6000000 INFO @ Sat, 03 Apr 2021 07:46:32: 9000000 INFO @ Sat, 03 Apr 2021 07:46:33: 10000000 INFO @ Sat, 03 Apr 2021 07:46:33: 7000000 INFO @ Sat, 03 Apr 2021 07:46:42: 10000000 INFO @ Sat, 03 Apr 2021 07:46:42: 8000000 INFO @ Sat, 03 Apr 2021 07:46:45: 11000000 INFO @ Sat, 03 Apr 2021 07:46:51: 9000000 INFO @ Sat, 03 Apr 2021 07:46:52: 11000000 INFO @ Sat, 03 Apr 2021 07:46:58: 12000000 INFO @ Sat, 03 Apr 2021 07:47:00: 10000000 INFO @ Sat, 03 Apr 2021 07:47:03: 12000000 INFO @ Sat, 03 Apr 2021 07:47:09: 11000000 INFO @ Sat, 03 Apr 2021 07:47:10: 13000000 INFO @ Sat, 03 Apr 2021 07:47:13: 13000000 INFO @ Sat, 03 Apr 2021 07:47:18: 12000000 INFO @ Sat, 03 Apr 2021 07:47:22: 14000000 INFO @ Sat, 03 Apr 2021 07:47:23: 14000000 INFO @ Sat, 03 Apr 2021 07:47:27: 13000000 INFO @ Sat, 03 Apr 2021 07:47:33: 15000000 INFO @ Sat, 03 Apr 2021 07:47:35: 15000000 INFO @ Sat, 03 Apr 2021 07:47:36: 14000000 INFO @ Sat, 03 Apr 2021 07:47:43: 16000000 INFO @ Sat, 03 Apr 2021 07:47:45: 15000000 INFO @ Sat, 03 Apr 2021 07:47:47: 16000000 INFO @ Sat, 03 Apr 2021 07:47:53: 17000000 INFO @ Sat, 03 Apr 2021 07:47:54: 16000000 INFO @ Sat, 03 Apr 2021 07:48:00: 17000000 INFO @ Sat, 03 Apr 2021 07:48:03: 17000000 INFO @ Sat, 03 Apr 2021 07:48:03: 18000000 INFO @ Sat, 03 Apr 2021 07:48:12: 18000000 INFO @ Sat, 03 Apr 2021 07:48:12: 18000000 INFO @ Sat, 03 Apr 2021 07:48:13: 19000000 INFO @ Sat, 03 Apr 2021 07:48:21: 19000000 INFO @ Sat, 03 Apr 2021 07:48:23: 20000000 INFO @ Sat, 03 Apr 2021 07:48:24: 19000000 INFO @ Sat, 03 Apr 2021 07:48:30: 20000000 INFO @ Sat, 03 Apr 2021 07:48:33: 21000000 INFO @ Sat, 03 Apr 2021 07:48:36: 20000000 INFO @ Sat, 03 Apr 2021 07:48:39: 21000000 INFO @ Sat, 03 Apr 2021 07:48:43: 22000000 INFO @ Sat, 03 Apr 2021 07:48:48: 22000000 INFO @ Sat, 03 Apr 2021 07:48:49: 21000000 INFO @ Sat, 03 Apr 2021 07:48:53: 23000000 INFO @ Sat, 03 Apr 2021 07:48:56: 23000000 INFO @ Sat, 03 Apr 2021 07:49:01: 22000000 INFO @ Sat, 03 Apr 2021 07:49:03: 24000000 INFO @ Sat, 03 Apr 2021 07:49:05: 24000000 INFO @ Sat, 03 Apr 2021 07:49:13: 23000000 INFO @ Sat, 03 Apr 2021 07:49:13: 25000000 INFO @ Sat, 03 Apr 2021 07:49:14: 25000000 INFO @ Sat, 03 Apr 2021 07:49:23: 26000000 INFO @ Sat, 03 Apr 2021 07:49:23: 26000000 INFO @ Sat, 03 Apr 2021 07:49:24: 24000000 INFO @ Sat, 03 Apr 2021 07:49:31: 27000000 INFO @ Sat, 03 Apr 2021 07:49:33: 27000000 INFO @ Sat, 03 Apr 2021 07:49:36: 25000000 INFO @ Sat, 03 Apr 2021 07:49:40: 28000000 INFO @ Sat, 03 Apr 2021 07:49:43: 28000000 INFO @ Sat, 03 Apr 2021 07:49:48: 26000000 INFO @ Sat, 03 Apr 2021 07:49:49: 29000000 INFO @ Sat, 03 Apr 2021 07:49:52: 29000000 INFO @ Sat, 03 Apr 2021 07:49:57: 30000000 INFO @ Sat, 03 Apr 2021 07:50:00: 27000000 INFO @ Sat, 03 Apr 2021 07:50:02: 30000000 INFO @ Sat, 03 Apr 2021 07:50:06: 31000000 INFO @ Sat, 03 Apr 2021 07:50:12: 28000000 INFO @ Sat, 03 Apr 2021 07:50:12: 31000000 INFO @ Sat, 03 Apr 2021 07:50:15: 32000000 INFO @ Sat, 03 Apr 2021 07:50:23: 32000000 INFO @ Sat, 03 Apr 2021 07:50:24: 33000000 INFO @ Sat, 03 Apr 2021 07:50:24: 29000000 INFO @ Sat, 03 Apr 2021 07:50:33: 34000000 INFO @ Sat, 03 Apr 2021 07:50:33: 33000000 INFO @ Sat, 03 Apr 2021 07:50:37: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:50:42: 35000000 INFO @ Sat, 03 Apr 2021 07:50:43: 34000000 INFO @ Sat, 03 Apr 2021 07:50:49: 31000000 INFO @ Sat, 03 Apr 2021 07:50:50: 36000000 INFO @ Sat, 03 Apr 2021 07:50:53: 35000000 INFO @ Sat, 03 Apr 2021 07:50:59: 37000000 INFO @ Sat, 03 Apr 2021 07:51:00: 32000000 INFO @ Sat, 03 Apr 2021 07:51:02: 36000000 INFO @ Sat, 03 Apr 2021 07:51:08: 38000000 INFO @ Sat, 03 Apr 2021 07:51:12: 37000000 INFO @ Sat, 03 Apr 2021 07:51:12: 33000000 INFO @ Sat, 03 Apr 2021 07:51:17: 39000000 INFO @ Sat, 03 Apr 2021 07:51:22: 38000000 INFO @ Sat, 03 Apr 2021 07:51:24: 34000000 INFO @ Sat, 03 Apr 2021 07:51:25: 40000000 INFO @ Sat, 03 Apr 2021 07:51:32: 39000000 INFO @ Sat, 03 Apr 2021 07:51:35: 41000000 INFO @ Sat, 03 Apr 2021 07:51:36: 35000000 INFO @ Sat, 03 Apr 2021 07:51:42: 40000000 INFO @ Sat, 03 Apr 2021 07:51:44: 42000000 INFO @ Sat, 03 Apr 2021 07:51:49: 36000000 INFO @ Sat, 03 Apr 2021 07:51:52: 41000000 INFO @ Sat, 03 Apr 2021 07:51:53: 43000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:52:01: 37000000 INFO @ Sat, 03 Apr 2021 07:52:02: 44000000 INFO @ Sat, 03 Apr 2021 07:52:02: 42000000 INFO @ Sat, 03 Apr 2021 07:52:11: 45000000 INFO @ Sat, 03 Apr 2021 07:52:12: 43000000 INFO @ Sat, 03 Apr 2021 07:52:14: 38000000 INFO @ Sat, 03 Apr 2021 07:52:21: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:52:21: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:52:21: #1 total tags in treatment: 18631920 INFO @ Sat, 03 Apr 2021 07:52:21: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:52:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:52:21: #1 tags after filtering in treatment: 12906268 INFO @ Sat, 03 Apr 2021 07:52:21: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 03 Apr 2021 07:52:21: #1 finished! INFO @ Sat, 03 Apr 2021 07:52:21: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:52:21: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:52:22: #2 number of paired peaks: 1668 INFO @ Sat, 03 Apr 2021 07:52:22: start model_add_line... INFO @ Sat, 03 Apr 2021 07:52:22: start X-correlation... INFO @ Sat, 03 Apr 2021 07:52:23: end of X-cor INFO @ Sat, 03 Apr 2021 07:52:23: #2 finished! INFO @ Sat, 03 Apr 2021 07:52:23: #2 predicted fragment length is 112 bps INFO @ Sat, 03 Apr 2021 07:52:23: #2 alternative fragment length(s) may be 112 bps INFO @ Sat, 03 Apr 2021 07:52:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20_model.r WARNING @ Sat, 03 Apr 2021 07:52:23: #2 Since the d (112) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:52:23: #2 You may need to consider one of the other alternative d(s): 112 WARNING @ Sat, 03 Apr 2021 07:52:23: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:52:23: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:52:23: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:52:23: 44000000 INFO @ Sat, 03 Apr 2021 07:52:26: 39000000 INFO @ Sat, 03 Apr 2021 07:52:33: 45000000 INFO @ Sat, 03 Apr 2021 07:52:38: 40000000 INFO @ Sat, 03 Apr 2021 07:52:42: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:52:42: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:52:42: #1 total tags in treatment: 18631920 INFO @ Sat, 03 Apr 2021 07:52:42: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:52:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:52:43: #1 tags after filtering in treatment: 12906268 INFO @ Sat, 03 Apr 2021 07:52:43: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 03 Apr 2021 07:52:43: #1 finished! INFO @ Sat, 03 Apr 2021 07:52:43: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:52:43: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:52:44: #2 number of paired peaks: 1668 INFO @ Sat, 03 Apr 2021 07:52:44: start model_add_line... INFO @ Sat, 03 Apr 2021 07:52:44: start X-correlation... INFO @ Sat, 03 Apr 2021 07:52:44: end of X-cor INFO @ Sat, 03 Apr 2021 07:52:44: #2 finished! INFO @ Sat, 03 Apr 2021 07:52:44: #2 predicted fragment length is 112 bps INFO @ Sat, 03 Apr 2021 07:52:44: #2 alternative fragment length(s) may be 112 bps INFO @ Sat, 03 Apr 2021 07:52:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10_model.r WARNING @ Sat, 03 Apr 2021 07:52:44: #2 Since the d (112) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:52:44: #2 You may need to consider one of the other alternative d(s): 112 WARNING @ Sat, 03 Apr 2021 07:52:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:52:44: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:52:44: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:52:49: 41000000 INFO @ Sat, 03 Apr 2021 07:53:00: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:53:01: 42000000 INFO @ Sat, 03 Apr 2021 07:53:13: 43000000 INFO @ Sat, 03 Apr 2021 07:53:21: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:53:22: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:53:22: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:53:22: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.20_summits.bed INFO @ Sat, 03 Apr 2021 07:53:22: Done! pass1 - making usageList (13 chroms): 3 millis pass2 - checking and writing primary data (3614 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:53:24: 44000000 INFO @ Sat, 03 Apr 2021 07:53:35: 45000000 INFO @ Sat, 03 Apr 2021 07:53:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:53:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:53:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.10_summits.bed INFO @ Sat, 03 Apr 2021 07:53:42: Done! pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (8738 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:53:46: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:53:46: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:53:46: #1 total tags in treatment: 18631920 INFO @ Sat, 03 Apr 2021 07:53:46: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:53:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:53:46: #1 tags after filtering in treatment: 12906268 INFO @ Sat, 03 Apr 2021 07:53:46: #1 Redundant rate of treatment: 0.31 INFO @ Sat, 03 Apr 2021 07:53:46: #1 finished! INFO @ Sat, 03 Apr 2021 07:53:46: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:53:46: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:53:48: #2 number of paired peaks: 1668 INFO @ Sat, 03 Apr 2021 07:53:48: start model_add_line... INFO @ Sat, 03 Apr 2021 07:53:48: start X-correlation... INFO @ Sat, 03 Apr 2021 07:53:48: end of X-cor INFO @ Sat, 03 Apr 2021 07:53:48: #2 finished! INFO @ Sat, 03 Apr 2021 07:53:48: #2 predicted fragment length is 112 bps INFO @ Sat, 03 Apr 2021 07:53:48: #2 alternative fragment length(s) may be 112 bps INFO @ Sat, 03 Apr 2021 07:53:48: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05_model.r WARNING @ Sat, 03 Apr 2021 07:53:48: #2 Since the d (112) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:53:48: #2 You may need to consider one of the other alternative d(s): 112 WARNING @ Sat, 03 Apr 2021 07:53:48: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:53:48: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:53:48: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:54:23: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:54:44: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:54:44: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:54:44: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX3104586/SRX3104586.05_summits.bed INFO @ Sat, 03 Apr 2021 07:54:44: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (14172 records, 4 fields): 19 millis CompletedMACS2peakCalling