Job ID = 1295004 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-03T02:16:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-03T02:16:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 63,475,241 reads read : 126,950,482 reads written : 126,950,482 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:40:18 63475241 reads; of these: 63475241 (100.00%) were paired; of these: 7610891 (11.99%) aligned concordantly 0 times 42359612 (66.73%) aligned concordantly exactly 1 time 13504738 (21.28%) aligned concordantly >1 times ---- 7610891 pairs aligned concordantly 0 times; of these: 976520 (12.83%) aligned discordantly 1 time ---- 6634371 pairs aligned 0 times concordantly or discordantly; of these: 13268742 mates make up the pairs; of these: 9059864 (68.28%) aligned 0 times 2629208 (19.82%) aligned exactly 1 time 1579670 (11.91%) aligned >1 times 92.86% overall alignment rate Time searching: 01:40:18 Overall time: 01:40:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 8524501 / 56059022 = 0.1521 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Mon, 03 Jun 2019 13:51:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 13:51:15: #1 read tag files... INFO @ Mon, 03 Jun 2019 13:51:15: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 13:51:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 13:51:15: #1 read tag files... INFO @ Mon, 03 Jun 2019 13:51:15: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 13:51:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 13:51:15: #1 read tag files... INFO @ Mon, 03 Jun 2019 13:51:15: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 13:51:21: 1000000 INFO @ Mon, 03 Jun 2019 13:51:24: 1000000 INFO @ Mon, 03 Jun 2019 13:51:24: 1000000 INFO @ Mon, 03 Jun 2019 13:51:27: 2000000 INFO @ Mon, 03 Jun 2019 13:51:32: 2000000 INFO @ Mon, 03 Jun 2019 13:51:33: 2000000 INFO @ Mon, 03 Jun 2019 13:51:33: 3000000 INFO @ Mon, 03 Jun 2019 13:51:39: 4000000 INFO @ Mon, 03 Jun 2019 13:51:40: 3000000 INFO @ Mon, 03 Jun 2019 13:51:41: 3000000 INFO @ Mon, 03 Jun 2019 13:51:45: 5000000 INFO @ Mon, 03 Jun 2019 13:51:48: 4000000 INFO @ Mon, 03 Jun 2019 13:51:50: 4000000 INFO @ Mon, 03 Jun 2019 13:51:51: 6000000 INFO @ Mon, 03 Jun 2019 13:51:56: 5000000 INFO @ Mon, 03 Jun 2019 13:51:57: 7000000 INFO @ Mon, 03 Jun 2019 13:51:59: 5000000 INFO @ Mon, 03 Jun 2019 13:52:03: 8000000 INFO @ Mon, 03 Jun 2019 13:52:04: 6000000 INFO @ Mon, 03 Jun 2019 13:52:07: 6000000 INFO @ Mon, 03 Jun 2019 13:52:09: 9000000 INFO @ Mon, 03 Jun 2019 13:52:12: 7000000 INFO @ Mon, 03 Jun 2019 13:52:15: 10000000 INFO @ Mon, 03 Jun 2019 13:52:16: 7000000 INFO @ Mon, 03 Jun 2019 13:52:20: 8000000 INFO @ Mon, 03 Jun 2019 13:52:21: 11000000 INFO @ Mon, 03 Jun 2019 13:52:24: 8000000 INFO @ Mon, 03 Jun 2019 13:52:27: 12000000 INFO @ Mon, 03 Jun 2019 13:52:28: 9000000 INFO @ Mon, 03 Jun 2019 13:52:32: 9000000 INFO @ Mon, 03 Jun 2019 13:52:33: 13000000 INFO @ Mon, 03 Jun 2019 13:52:36: 10000000 INFO @ Mon, 03 Jun 2019 13:52:39: 14000000 INFO @ Mon, 03 Jun 2019 13:52:42: 10000000 INFO @ Mon, 03 Jun 2019 13:52:44: 11000000 INFO @ Mon, 03 Jun 2019 13:52:45: 15000000 INFO @ Mon, 03 Jun 2019 13:52:51: 11000000 INFO @ Mon, 03 Jun 2019 13:52:52: 16000000 INFO @ Mon, 03 Jun 2019 13:52:53: 12000000 INFO @ Mon, 03 Jun 2019 13:52:58: 17000000 INFO @ Mon, 03 Jun 2019 13:52:59: 12000000 INFO @ Mon, 03 Jun 2019 13:53:01: 13000000 INFO @ Mon, 03 Jun 2019 13:53:04: 18000000 INFO @ Mon, 03 Jun 2019 13:53:08: 13000000 INFO @ Mon, 03 Jun 2019 13:53:09: 14000000 INFO @ Mon, 03 Jun 2019 13:53:10: 19000000 INFO @ Mon, 03 Jun 2019 13:53:16: 20000000 INFO @ Mon, 03 Jun 2019 13:53:16: 14000000 INFO @ Mon, 03 Jun 2019 13:53:17: 15000000 INFO @ Mon, 03 Jun 2019 13:53:22: 21000000 INFO @ Mon, 03 Jun 2019 13:53:25: 15000000 INFO @ Mon, 03 Jun 2019 13:53:25: 16000000 INFO @ Mon, 03 Jun 2019 13:53:28: 22000000 INFO @ Mon, 03 Jun 2019 13:53:33: 17000000 INFO @ Mon, 03 Jun 2019 13:53:34: 16000000 INFO @ Mon, 03 Jun 2019 13:53:34: 23000000 INFO @ Mon, 03 Jun 2019 13:53:40: 24000000 INFO @ Mon, 03 Jun 2019 13:53:41: 18000000 INFO @ Mon, 03 Jun 2019 13:53:42: 17000000 INFO @ Mon, 03 Jun 2019 13:53:46: 25000000 INFO @ Mon, 03 Jun 2019 13:53:49: 19000000 INFO @ Mon, 03 Jun 2019 13:53:50: 18000000 INFO @ Mon, 03 Jun 2019 13:53:52: 26000000 INFO @ Mon, 03 Jun 2019 13:53:57: 20000000 INFO @ Mon, 03 Jun 2019 13:53:58: 27000000 INFO @ Mon, 03 Jun 2019 13:53:58: 19000000 INFO @ Mon, 03 Jun 2019 13:54:04: 28000000 INFO @ Mon, 03 Jun 2019 13:54:06: 21000000 INFO @ Mon, 03 Jun 2019 13:54:08: 20000000 INFO @ Mon, 03 Jun 2019 13:54:10: 29000000 INFO @ Mon, 03 Jun 2019 13:54:14: 22000000 INFO @ Mon, 03 Jun 2019 13:54:15: 30000000 INFO @ Mon, 03 Jun 2019 13:54:17: 21000000 INFO @ Mon, 03 Jun 2019 13:54:22: 31000000 INFO @ Mon, 03 Jun 2019 13:54:22: 23000000 INFO @ Mon, 03 Jun 2019 13:54:25: 22000000 INFO @ Mon, 03 Jun 2019 13:54:28: 32000000 INFO @ Mon, 03 Jun 2019 13:54:30: 24000000 INFO @ Mon, 03 Jun 2019 13:54:33: 33000000 INFO @ Mon, 03 Jun 2019 13:54:34: 23000000 INFO @ Mon, 03 Jun 2019 13:54:38: 25000000 INFO @ Mon, 03 Jun 2019 13:54:39: 34000000 INFO @ Mon, 03 Jun 2019 13:54:42: 24000000 INFO @ Mon, 03 Jun 2019 13:54:45: 35000000 INFO @ Mon, 03 Jun 2019 13:54:46: 26000000 INFO @ Mon, 03 Jun 2019 13:54:50: 25000000 INFO @ Mon, 03 Jun 2019 13:54:51: 36000000 INFO @ Mon, 03 Jun 2019 13:54:54: 27000000 INFO @ Mon, 03 Jun 2019 13:54:57: 37000000 INFO @ Mon, 03 Jun 2019 13:54:59: 26000000 INFO @ Mon, 03 Jun 2019 13:55:02: 28000000 INFO @ Mon, 03 Jun 2019 13:55:03: 38000000 INFO @ Mon, 03 Jun 2019 13:55:07: 27000000 INFO @ Mon, 03 Jun 2019 13:55:08: 39000000 INFO @ Mon, 03 Jun 2019 13:55:10: 29000000 INFO @ Mon, 03 Jun 2019 13:55:14: 40000000 INFO @ Mon, 03 Jun 2019 13:55:16: 28000000 INFO @ Mon, 03 Jun 2019 13:55:18: 30000000 INFO @ Mon, 03 Jun 2019 13:55:20: 41000000 INFO @ Mon, 03 Jun 2019 13:55:24: 29000000 INFO @ Mon, 03 Jun 2019 13:55:26: 31000000 INFO @ Mon, 03 Jun 2019 13:55:26: 42000000 INFO @ Mon, 03 Jun 2019 13:55:32: 30000000 INFO @ Mon, 03 Jun 2019 13:55:32: 43000000 INFO @ Mon, 03 Jun 2019 13:55:34: 32000000 INFO @ Mon, 03 Jun 2019 13:55:38: 44000000 INFO @ Mon, 03 Jun 2019 13:55:41: 31000000 INFO @ Mon, 03 Jun 2019 13:55:41: 33000000 INFO @ Mon, 03 Jun 2019 13:55:44: 45000000 INFO @ Mon, 03 Jun 2019 13:55:49: 34000000 INFO @ Mon, 03 Jun 2019 13:55:50: 32000000 INFO @ Mon, 03 Jun 2019 13:55:50: 46000000 INFO @ Mon, 03 Jun 2019 13:55:56: 47000000 INFO @ Mon, 03 Jun 2019 13:55:57: 35000000 INFO @ Mon, 03 Jun 2019 13:55:57: 33000000 INFO @ Mon, 03 Jun 2019 13:56:02: 48000000 INFO @ Mon, 03 Jun 2019 13:56:04: 36000000 INFO @ Mon, 03 Jun 2019 13:56:05: 34000000 INFO @ Mon, 03 Jun 2019 13:56:08: 49000000 INFO @ Mon, 03 Jun 2019 13:56:12: 37000000 INFO @ Mon, 03 Jun 2019 13:56:13: 35000000 INFO @ Mon, 03 Jun 2019 13:56:14: 50000000 INFO @ Mon, 03 Jun 2019 13:56:19: 38000000 INFO @ Mon, 03 Jun 2019 13:56:19: 51000000 INFO @ Mon, 03 Jun 2019 13:56:20: 36000000 INFO @ Mon, 03 Jun 2019 13:56:25: 52000000 INFO @ Mon, 03 Jun 2019 13:56:26: 39000000 INFO @ Mon, 03 Jun 2019 13:56:28: 37000000 INFO @ Mon, 03 Jun 2019 13:56:31: 53000000 INFO @ Mon, 03 Jun 2019 13:56:34: 40000000 INFO @ Mon, 03 Jun 2019 13:56:36: 38000000 INFO @ Mon, 03 Jun 2019 13:56:37: 54000000 INFO @ Mon, 03 Jun 2019 13:56:41: 41000000 INFO @ Mon, 03 Jun 2019 13:56:43: 55000000 INFO @ Mon, 03 Jun 2019 13:56:43: 39000000 INFO @ Mon, 03 Jun 2019 13:56:49: 56000000 INFO @ Mon, 03 Jun 2019 13:56:49: 42000000 INFO @ Mon, 03 Jun 2019 13:56:51: 40000000 INFO @ Mon, 03 Jun 2019 13:56:55: 57000000 INFO @ Mon, 03 Jun 2019 13:56:57: 43000000 INFO @ Mon, 03 Jun 2019 13:56:58: 41000000 INFO @ Mon, 03 Jun 2019 13:57:01: 58000000 INFO @ Mon, 03 Jun 2019 13:57:05: 44000000 INFO @ Mon, 03 Jun 2019 13:57:06: 59000000 INFO @ Mon, 03 Jun 2019 13:57:07: 42000000 INFO @ Mon, 03 Jun 2019 13:57:12: 60000000 INFO @ Mon, 03 Jun 2019 13:57:14: 45000000 INFO @ Mon, 03 Jun 2019 13:57:16: 43000000 INFO @ Mon, 03 Jun 2019 13:57:18: 61000000 INFO @ Mon, 03 Jun 2019 13:57:22: 46000000 INFO @ Mon, 03 Jun 2019 13:57:24: 62000000 INFO @ Mon, 03 Jun 2019 13:57:25: 44000000 INFO @ Mon, 03 Jun 2019 13:57:30: 63000000 INFO @ Mon, 03 Jun 2019 13:57:30: 47000000 INFO @ Mon, 03 Jun 2019 13:57:33: 45000000 INFO @ Mon, 03 Jun 2019 13:57:36: 64000000 INFO @ Mon, 03 Jun 2019 13:57:38: 48000000 INFO @ Mon, 03 Jun 2019 13:57:41: 46000000 INFO @ Mon, 03 Jun 2019 13:57:43: 65000000 INFO @ Mon, 03 Jun 2019 13:57:46: 49000000 INFO @ Mon, 03 Jun 2019 13:57:49: 47000000 INFO @ Mon, 03 Jun 2019 13:57:49: 66000000 INFO @ Mon, 03 Jun 2019 13:57:54: 50000000 INFO @ Mon, 03 Jun 2019 13:57:55: 67000000 INFO @ Mon, 03 Jun 2019 13:57:57: 48000000 INFO @ Mon, 03 Jun 2019 13:58:01: 68000000 INFO @ Mon, 03 Jun 2019 13:58:02: 51000000 INFO @ Mon, 03 Jun 2019 13:58:05: 49000000 INFO @ Mon, 03 Jun 2019 13:58:07: 69000000 INFO @ Mon, 03 Jun 2019 13:58:10: 52000000 INFO @ Mon, 03 Jun 2019 13:58:13: 70000000 INFO @ Mon, 03 Jun 2019 13:58:13: 50000000 INFO @ Mon, 03 Jun 2019 13:58:18: 53000000 INFO @ Mon, 03 Jun 2019 13:58:19: 71000000 INFO @ Mon, 03 Jun 2019 13:58:20: 51000000 INFO @ Mon, 03 Jun 2019 13:58:24: 72000000 INFO @ Mon, 03 Jun 2019 13:58:26: 54000000 INFO @ Mon, 03 Jun 2019 13:58:28: 52000000 INFO @ Mon, 03 Jun 2019 13:58:30: 73000000 INFO @ Mon, 03 Jun 2019 13:58:34: 55000000 INFO @ Mon, 03 Jun 2019 13:58:36: 74000000 INFO @ Mon, 03 Jun 2019 13:58:37: 53000000 INFO @ Mon, 03 Jun 2019 13:58:42: 75000000 INFO @ Mon, 03 Jun 2019 13:58:43: 56000000 INFO @ Mon, 03 Jun 2019 13:58:45: 54000000 INFO @ Mon, 03 Jun 2019 13:58:48: 76000000 INFO @ Mon, 03 Jun 2019 13:58:50: 57000000 INFO @ Mon, 03 Jun 2019 13:58:53: 55000000 INFO @ Mon, 03 Jun 2019 13:58:54: 77000000 INFO @ Mon, 03 Jun 2019 13:58:58: 58000000 INFO @ Mon, 03 Jun 2019 13:59:00: 78000000 INFO @ Mon, 03 Jun 2019 13:59:01: 56000000 INFO @ Mon, 03 Jun 2019 13:59:06: 59000000 INFO @ Mon, 03 Jun 2019 13:59:06: 79000000 INFO @ Mon, 03 Jun 2019 13:59:09: 57000000 INFO @ Mon, 03 Jun 2019 13:59:13: 80000000 INFO @ Mon, 03 Jun 2019 13:59:14: 60000000 INFO @ Mon, 03 Jun 2019 13:59:17: 58000000 INFO @ Mon, 03 Jun 2019 13:59:19: 81000000 INFO @ Mon, 03 Jun 2019 13:59:22: 61000000 INFO @ Mon, 03 Jun 2019 13:59:25: 82000000 INFO @ Mon, 03 Jun 2019 13:59:25: 59000000 INFO @ Mon, 03 Jun 2019 13:59:31: 62000000 INFO @ Mon, 03 Jun 2019 13:59:31: 83000000 INFO @ Mon, 03 Jun 2019 13:59:33: 60000000 INFO @ Mon, 03 Jun 2019 13:59:37: 84000000 INFO @ Mon, 03 Jun 2019 13:59:39: 63000000 INFO @ Mon, 03 Jun 2019 13:59:41: 61000000 INFO @ Mon, 03 Jun 2019 13:59:43: 85000000 INFO @ Mon, 03 Jun 2019 13:59:47: 64000000 INFO @ Mon, 03 Jun 2019 13:59:48: 86000000 INFO @ Mon, 03 Jun 2019 13:59:49: 62000000 INFO @ Mon, 03 Jun 2019 13:59:54: 65000000 INFO @ Mon, 03 Jun 2019 13:59:54: 87000000 INFO @ Mon, 03 Jun 2019 13:59:57: 63000000 INFO @ Mon, 03 Jun 2019 14:00:00: 88000000 INFO @ Mon, 03 Jun 2019 14:00:03: 66000000 INFO @ Mon, 03 Jun 2019 14:00:06: 89000000 INFO @ Mon, 03 Jun 2019 14:00:06: 64000000 INFO @ Mon, 03 Jun 2019 14:00:12: 67000000 INFO @ Mon, 03 Jun 2019 14:00:12: 90000000 INFO @ Mon, 03 Jun 2019 14:00:14: 65000000 INFO @ Mon, 03 Jun 2019 14:00:18: 91000000 INFO @ Mon, 03 Jun 2019 14:00:20: 68000000 INFO @ Mon, 03 Jun 2019 14:00:23: 66000000 INFO @ Mon, 03 Jun 2019 14:00:24: 92000000 INFO @ Mon, 03 Jun 2019 14:00:28: 69000000 INFO @ Mon, 03 Jun 2019 14:00:30: 93000000 INFO @ Mon, 03 Jun 2019 14:00:31: 67000000 INFO @ Mon, 03 Jun 2019 14:00:36: 94000000 INFO @ Mon, 03 Jun 2019 14:00:36: 70000000 INFO @ Mon, 03 Jun 2019 14:00:39: 68000000 INFO @ Mon, 03 Jun 2019 14:00:42: 95000000 INFO @ Mon, 03 Jun 2019 14:00:44: 71000000 INFO @ Mon, 03 Jun 2019 14:00:47: 69000000 INFO @ Mon, 03 Jun 2019 14:00:48: 96000000 INFO @ Mon, 03 Jun 2019 14:00:52: 72000000 INFO @ Mon, 03 Jun 2019 14:00:53: 97000000 INFO @ Mon, 03 Jun 2019 14:00:55: 70000000 INFO @ Mon, 03 Jun 2019 14:00:59: 98000000 INFO @ Mon, 03 Jun 2019 14:01:00: 73000000 INFO @ Mon, 03 Jun 2019 14:01:03: 71000000 INFO @ Mon, 03 Jun 2019 14:01:05: 99000000 INFO @ Mon, 03 Jun 2019 14:01:08: 74000000 INFO @ Mon, 03 Jun 2019 14:01:11: 100000000 INFO @ Mon, 03 Jun 2019 14:01:12: 72000000 INFO @ Mon, 03 Jun 2019 14:01:16: 75000000 INFO @ Mon, 03 Jun 2019 14:01:17: #1 tag size is determined as 24 bps INFO @ Mon, 03 Jun 2019 14:01:17: #1 tag size = 24 INFO @ Mon, 03 Jun 2019 14:01:17: #1 total tags in treatment: 47343594 INFO @ Mon, 03 Jun 2019 14:01:17: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 14:01:17: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 14:01:18: #1 tags after filtering in treatment: 30173468 INFO @ Mon, 03 Jun 2019 14:01:18: #1 Redundant rate of treatment: 0.36 INFO @ Mon, 03 Jun 2019 14:01:18: #1 finished! INFO @ Mon, 03 Jun 2019 14:01:18: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 14:01:18: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 14:01:19: 73000000 INFO @ Mon, 03 Jun 2019 14:01:21: #2 number of paired peaks: 0 WARNING @ Mon, 03 Jun 2019 14:01:21: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Mon, 03 Jun 2019 14:01:21: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 14:01:24: 76000000 INFO @ Mon, 03 Jun 2019 14:01:27: 74000000 INFO @ Mon, 03 Jun 2019 14:01:34: 77000000 INFO @ Mon, 03 Jun 2019 14:01:36: 75000000 INFO @ Mon, 03 Jun 2019 14:01:43: 78000000 INFO @ Mon, 03 Jun 2019 14:01:44: 76000000 INFO @ Mon, 03 Jun 2019 14:01:52: 79000000 INFO @ Mon, 03 Jun 2019 14:01:53: 77000000 INFO @ Mon, 03 Jun 2019 14:02:00: 80000000 INFO @ Mon, 03 Jun 2019 14:02:02: 78000000 INFO @ Mon, 03 Jun 2019 14:02:09: 81000000 INFO @ Mon, 03 Jun 2019 14:02:11: 79000000 INFO @ Mon, 03 Jun 2019 14:02:18: 82000000 INFO @ Mon, 03 Jun 2019 14:02:19: 80000000 INFO @ Mon, 03 Jun 2019 14:02:26: 83000000 INFO @ Mon, 03 Jun 2019 14:02:28: 81000000 INFO @ Mon, 03 Jun 2019 14:02:35: 84000000 INFO @ Mon, 03 Jun 2019 14:02:37: 82000000 INFO @ Mon, 03 Jun 2019 14:02:42: 85000000 INFO @ Mon, 03 Jun 2019 14:02:45: 83000000 INFO @ Mon, 03 Jun 2019 14:02:50: 86000000 INFO @ Mon, 03 Jun 2019 14:02:53: 84000000 INFO @ Mon, 03 Jun 2019 14:02:59: 87000000 INFO @ Mon, 03 Jun 2019 14:03:02: 85000000 INFO @ Mon, 03 Jun 2019 14:03:08: 88000000 INFO @ Mon, 03 Jun 2019 14:03:10: 86000000 INFO @ Mon, 03 Jun 2019 14:03:16: 89000000 INFO @ Mon, 03 Jun 2019 14:03:18: 87000000 INFO @ Mon, 03 Jun 2019 14:03:24: 90000000 INFO @ Mon, 03 Jun 2019 14:03:27: 88000000 INFO @ Mon, 03 Jun 2019 14:03:32: 91000000 INFO @ Mon, 03 Jun 2019 14:03:35: 89000000 INFO @ Mon, 03 Jun 2019 14:03:40: 92000000 INFO @ Mon, 03 Jun 2019 14:03:44: 90000000 INFO @ Mon, 03 Jun 2019 14:03:49: 93000000 INFO @ Mon, 03 Jun 2019 14:03:52: 91000000 INFO @ Mon, 03 Jun 2019 14:03:57: 94000000 INFO @ Mon, 03 Jun 2019 14:04:00: 92000000 INFO @ Mon, 03 Jun 2019 14:04:05: 95000000 INFO @ Mon, 03 Jun 2019 14:04:08: 93000000 INFO @ Mon, 03 Jun 2019 14:04:13: 96000000 INFO @ Mon, 03 Jun 2019 14:04:16: 94000000 INFO @ Mon, 03 Jun 2019 14:04:21: 97000000 INFO @ Mon, 03 Jun 2019 14:04:24: 95000000 INFO @ Mon, 03 Jun 2019 14:04:29: 98000000 INFO @ Mon, 03 Jun 2019 14:04:33: 96000000 INFO @ Mon, 03 Jun 2019 14:04:37: 99000000 INFO @ Mon, 03 Jun 2019 14:04:42: 97000000 INFO @ Mon, 03 Jun 2019 14:04:44: 100000000 INFO @ Mon, 03 Jun 2019 14:04:50: 98000000 INFO @ Mon, 03 Jun 2019 14:04:51: #1 tag size is determined as 24 bps INFO @ Mon, 03 Jun 2019 14:04:51: #1 tag size = 24 INFO @ Mon, 03 Jun 2019 14:04:51: #1 total tags in treatment: 47343594 INFO @ Mon, 03 Jun 2019 14:04:51: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 14:04:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 14:04:53: #1 tags after filtering in treatment: 30173468 INFO @ Mon, 03 Jun 2019 14:04:53: #1 Redundant rate of treatment: 0.36 INFO @ Mon, 03 Jun 2019 14:04:53: #1 finished! INFO @ Mon, 03 Jun 2019 14:04:53: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 14:04:53: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 14:04:55: #2 number of paired peaks: 0 WARNING @ Mon, 03 Jun 2019 14:04:55: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Mon, 03 Jun 2019 14:04:55: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 14:04:58: 99000000 INFO @ Mon, 03 Jun 2019 14:05:06: 100000000 INFO @ Mon, 03 Jun 2019 14:05:13: #1 tag size is determined as 24 bps INFO @ Mon, 03 Jun 2019 14:05:13: #1 tag size = 24 INFO @ Mon, 03 Jun 2019 14:05:13: #1 total tags in treatment: 47343594 INFO @ Mon, 03 Jun 2019 14:05:13: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 14:05:13: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 14:05:15: #1 tags after filtering in treatment: 30173468 INFO @ Mon, 03 Jun 2019 14:05:15: #1 Redundant rate of treatment: 0.36 INFO @ Mon, 03 Jun 2019 14:05:15: #1 finished! INFO @ Mon, 03 Jun 2019 14:05:15: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 14:05:15: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 14:05:17: #2 number of paired peaks: 0 WARNING @ Mon, 03 Jun 2019 14:05:17: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Mon, 03 Jun 2019 14:05:17: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX300938/SRX300938.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。