Job ID = 1294358 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-02T22:04:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed : NET - Reading information from the socket failed ) 2019-06-02T22:04:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed : NET - Reading information from the socket failed ) 2019-06-02T22:04:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 26,535,655 reads read : 53,071,310 reads written : 53,071,310 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:37:07 26535655 reads; of these: 26535655 (100.00%) were paired; of these: 1179613 (4.45%) aligned concordantly 0 times 18545791 (69.89%) aligned concordantly exactly 1 time 6810251 (25.66%) aligned concordantly >1 times ---- 1179613 pairs aligned concordantly 0 times; of these: 152873 (12.96%) aligned discordantly 1 time ---- 1026740 pairs aligned 0 times concordantly or discordantly; of these: 2053480 mates make up the pairs; of these: 1236981 (60.24%) aligned 0 times 533321 (25.97%) aligned exactly 1 time 283178 (13.79%) aligned >1 times 97.67% overall alignment rate Time searching: 01:37:07 Overall time: 01:37:08 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 449031 / 25488784 = 0.0176 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Mon, 03 Jun 2019 09:13:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 09:13:09: #1 read tag files... INFO @ Mon, 03 Jun 2019 09:13:09: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 09:13:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 09:13:09: #1 read tag files... INFO @ Mon, 03 Jun 2019 09:13:09: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 09:13:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 09:13:09: #1 read tag files... INFO @ Mon, 03 Jun 2019 09:13:09: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 09:13:20: 1000000 INFO @ Mon, 03 Jun 2019 09:13:20: 1000000 INFO @ Mon, 03 Jun 2019 09:13:20: 1000000 INFO @ Mon, 03 Jun 2019 09:13:32: 2000000 INFO @ Mon, 03 Jun 2019 09:13:32: 2000000 INFO @ Mon, 03 Jun 2019 09:13:32: 2000000 INFO @ Mon, 03 Jun 2019 09:13:43: 3000000 INFO @ Mon, 03 Jun 2019 09:13:43: 3000000 INFO @ Mon, 03 Jun 2019 09:13:43: 3000000 INFO @ Mon, 03 Jun 2019 09:13:53: 4000000 INFO @ Mon, 03 Jun 2019 09:13:54: 4000000 INFO @ Mon, 03 Jun 2019 09:13:55: 4000000 INFO @ Mon, 03 Jun 2019 09:14:05: 5000000 INFO @ Mon, 03 Jun 2019 09:14:06: 5000000 INFO @ Mon, 03 Jun 2019 09:14:06: 5000000 INFO @ Mon, 03 Jun 2019 09:14:15: 6000000 INFO @ Mon, 03 Jun 2019 09:14:17: 6000000 INFO @ Mon, 03 Jun 2019 09:14:17: 6000000 INFO @ Mon, 03 Jun 2019 09:14:26: 7000000 INFO @ Mon, 03 Jun 2019 09:14:28: 7000000 INFO @ Mon, 03 Jun 2019 09:14:28: 7000000 INFO @ Mon, 03 Jun 2019 09:14:36: 8000000 INFO @ Mon, 03 Jun 2019 09:14:39: 8000000 INFO @ Mon, 03 Jun 2019 09:14:39: 8000000 INFO @ Mon, 03 Jun 2019 09:14:47: 9000000 INFO @ Mon, 03 Jun 2019 09:14:50: 9000000 INFO @ Mon, 03 Jun 2019 09:14:50: 9000000 INFO @ Mon, 03 Jun 2019 09:14:57: 10000000 INFO @ Mon, 03 Jun 2019 09:15:01: 10000000 INFO @ Mon, 03 Jun 2019 09:15:01: 10000000 INFO @ Mon, 03 Jun 2019 09:15:08: 11000000 INFO @ Mon, 03 Jun 2019 09:15:12: 11000000 INFO @ Mon, 03 Jun 2019 09:15:12: 11000000 INFO @ Mon, 03 Jun 2019 09:15:19: 12000000 INFO @ Mon, 03 Jun 2019 09:15:23: 12000000 INFO @ Mon, 03 Jun 2019 09:15:24: 12000000 INFO @ Mon, 03 Jun 2019 09:15:29: 13000000 INFO @ Mon, 03 Jun 2019 09:15:34: 13000000 INFO @ Mon, 03 Jun 2019 09:15:34: 13000000 INFO @ Mon, 03 Jun 2019 09:15:41: 14000000 INFO @ Mon, 03 Jun 2019 09:15:45: 14000000 INFO @ Mon, 03 Jun 2019 09:15:45: 14000000 INFO @ Mon, 03 Jun 2019 09:15:52: 15000000 INFO @ Mon, 03 Jun 2019 09:15:56: 15000000 INFO @ Mon, 03 Jun 2019 09:15:57: 15000000 INFO @ Mon, 03 Jun 2019 09:16:03: 16000000 INFO @ Mon, 03 Jun 2019 09:16:06: 16000000 INFO @ Mon, 03 Jun 2019 09:16:08: 16000000 INFO @ Mon, 03 Jun 2019 09:16:14: 17000000 INFO @ Mon, 03 Jun 2019 09:16:18: 17000000 INFO @ Mon, 03 Jun 2019 09:16:19: 17000000 INFO @ Mon, 03 Jun 2019 09:16:25: 18000000 INFO @ Mon, 03 Jun 2019 09:16:28: 18000000 INFO @ Mon, 03 Jun 2019 09:16:30: 18000000 INFO @ Mon, 03 Jun 2019 09:16:37: 19000000 INFO @ Mon, 03 Jun 2019 09:16:40: 19000000 INFO @ Mon, 03 Jun 2019 09:16:42: 19000000 INFO @ Mon, 03 Jun 2019 09:16:48: 20000000 INFO @ Mon, 03 Jun 2019 09:16:51: 20000000 INFO @ Mon, 03 Jun 2019 09:16:54: 20000000 INFO @ Mon, 03 Jun 2019 09:17:00: 21000000 INFO @ Mon, 03 Jun 2019 09:17:01: 21000000 INFO @ Mon, 03 Jun 2019 09:17:05: 21000000 INFO @ Mon, 03 Jun 2019 09:17:11: 22000000 INFO @ Mon, 03 Jun 2019 09:17:12: 22000000 INFO @ Mon, 03 Jun 2019 09:17:17: 22000000 INFO @ Mon, 03 Jun 2019 09:17:23: 23000000 INFO @ Mon, 03 Jun 2019 09:17:24: 23000000 INFO @ Mon, 03 Jun 2019 09:17:28: 23000000 INFO @ Mon, 03 Jun 2019 09:17:34: 24000000 INFO @ Mon, 03 Jun 2019 09:17:35: 24000000 INFO @ Mon, 03 Jun 2019 09:17:39: 24000000 INFO @ Mon, 03 Jun 2019 09:17:45: 25000000 INFO @ Mon, 03 Jun 2019 09:17:46: 25000000 INFO @ Mon, 03 Jun 2019 09:17:51: 25000000 INFO @ Mon, 03 Jun 2019 09:17:56: 26000000 INFO @ Mon, 03 Jun 2019 09:17:57: 26000000 INFO @ Mon, 03 Jun 2019 09:18:02: 26000000 INFO @ Mon, 03 Jun 2019 09:18:07: 27000000 INFO @ Mon, 03 Jun 2019 09:18:08: 27000000 INFO @ Mon, 03 Jun 2019 09:18:13: 27000000 INFO @ Mon, 03 Jun 2019 09:18:18: 28000000 INFO @ Mon, 03 Jun 2019 09:18:19: 28000000 INFO @ Mon, 03 Jun 2019 09:18:25: 28000000 INFO @ Mon, 03 Jun 2019 09:18:29: 29000000 INFO @ Mon, 03 Jun 2019 09:18:30: 29000000 INFO @ Mon, 03 Jun 2019 09:18:37: 29000000 INFO @ Mon, 03 Jun 2019 09:18:40: 30000000 INFO @ Mon, 03 Jun 2019 09:18:41: 30000000 INFO @ Mon, 03 Jun 2019 09:18:48: 30000000 INFO @ Mon, 03 Jun 2019 09:18:50: 31000000 INFO @ Mon, 03 Jun 2019 09:18:51: 31000000 INFO @ Mon, 03 Jun 2019 09:18:59: 31000000 INFO @ Mon, 03 Jun 2019 09:19:01: 32000000 INFO @ Mon, 03 Jun 2019 09:19:02: 32000000 INFO @ Mon, 03 Jun 2019 09:19:10: 32000000 INFO @ Mon, 03 Jun 2019 09:19:12: 33000000 INFO @ Mon, 03 Jun 2019 09:19:13: 33000000 INFO @ Mon, 03 Jun 2019 09:19:21: 33000000 INFO @ Mon, 03 Jun 2019 09:19:23: 34000000 INFO @ Mon, 03 Jun 2019 09:19:24: 34000000 INFO @ Mon, 03 Jun 2019 09:19:32: 34000000 INFO @ Mon, 03 Jun 2019 09:19:34: 35000000 INFO @ Mon, 03 Jun 2019 09:19:35: 35000000 INFO @ Mon, 03 Jun 2019 09:19:45: 35000000 INFO @ Mon, 03 Jun 2019 09:19:45: 36000000 INFO @ Mon, 03 Jun 2019 09:19:46: 36000000 INFO @ Mon, 03 Jun 2019 09:19:56: 37000000 INFO @ Mon, 03 Jun 2019 09:19:56: 36000000 INFO @ Mon, 03 Jun 2019 09:19:58: 37000000 INFO @ Mon, 03 Jun 2019 09:20:07: 37000000 INFO @ Mon, 03 Jun 2019 09:20:08: 38000000 INFO @ Mon, 03 Jun 2019 09:20:10: 38000000 INFO @ Mon, 03 Jun 2019 09:20:17: 38000000 INFO @ Mon, 03 Jun 2019 09:20:19: 39000000 INFO @ Mon, 03 Jun 2019 09:20:22: 39000000 INFO @ Mon, 03 Jun 2019 09:20:29: 39000000 INFO @ Mon, 03 Jun 2019 09:20:32: 40000000 INFO @ Mon, 03 Jun 2019 09:20:35: 40000000 INFO @ Mon, 03 Jun 2019 09:20:41: 40000000 INFO @ Mon, 03 Jun 2019 09:20:44: 41000000 INFO @ Mon, 03 Jun 2019 09:20:47: 41000000 INFO @ Mon, 03 Jun 2019 09:20:52: 41000000 INFO @ Mon, 03 Jun 2019 09:20:56: 42000000 INFO @ Mon, 03 Jun 2019 09:21:00: 42000000 INFO @ Mon, 03 Jun 2019 09:21:03: 42000000 INFO @ Mon, 03 Jun 2019 09:21:09: 43000000 INFO @ Mon, 03 Jun 2019 09:21:13: 43000000 INFO @ Mon, 03 Jun 2019 09:21:14: 43000000 INFO @ Mon, 03 Jun 2019 09:21:21: 44000000 INFO @ Mon, 03 Jun 2019 09:21:25: 44000000 INFO @ Mon, 03 Jun 2019 09:21:25: 44000000 INFO @ Mon, 03 Jun 2019 09:21:32: 45000000 INFO @ Mon, 03 Jun 2019 09:21:36: 45000000 INFO @ Mon, 03 Jun 2019 09:21:37: 45000000 INFO @ Mon, 03 Jun 2019 09:21:45: 46000000 INFO @ Mon, 03 Jun 2019 09:21:47: 46000000 INFO @ Mon, 03 Jun 2019 09:21:50: 46000000 INFO @ Mon, 03 Jun 2019 09:21:57: 47000000 INFO @ Mon, 03 Jun 2019 09:21:58: 47000000 INFO @ Mon, 03 Jun 2019 09:22:02: 47000000 INFO @ Mon, 03 Jun 2019 09:22:09: 48000000 INFO @ Mon, 03 Jun 2019 09:22:09: 48000000 INFO @ Mon, 03 Jun 2019 09:22:14: 48000000 INFO @ Mon, 03 Jun 2019 09:22:21: 49000000 INFO @ Mon, 03 Jun 2019 09:22:22: 49000000 INFO @ Mon, 03 Jun 2019 09:22:26: 49000000 INFO @ Mon, 03 Jun 2019 09:22:32: 50000000 INFO @ Mon, 03 Jun 2019 09:22:34: 50000000 INFO @ Mon, 03 Jun 2019 09:22:37: 50000000 INFO @ Mon, 03 Jun 2019 09:22:42: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 09:22:42: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 09:22:42: #1 total tags in treatment: 24907485 INFO @ Mon, 03 Jun 2019 09:22:42: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 09:22:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 09:22:42: #1 tags after filtering in treatment: 22817012 INFO @ Mon, 03 Jun 2019 09:22:42: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 09:22:42: #1 finished! INFO @ Mon, 03 Jun 2019 09:22:42: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 09:22:42: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 09:22:45: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 09:22:45: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 09:22:45: #1 total tags in treatment: 24907485 INFO @ Mon, 03 Jun 2019 09:22:45: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 09:22:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 09:22:45: #2 number of paired peaks: 323 WARNING @ Mon, 03 Jun 2019 09:22:45: Fewer paired peaks (323) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 323 pairs to build model! INFO @ Mon, 03 Jun 2019 09:22:45: start model_add_line... INFO @ Mon, 03 Jun 2019 09:22:45: start X-correlation... INFO @ Mon, 03 Jun 2019 09:22:45: end of X-cor INFO @ Mon, 03 Jun 2019 09:22:45: #2 finished! INFO @ Mon, 03 Jun 2019 09:22:45: #2 predicted fragment length is 147 bps INFO @ Mon, 03 Jun 2019 09:22:45: #2 alternative fragment length(s) may be 147 bps INFO @ Mon, 03 Jun 2019 09:22:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10_model.r INFO @ Mon, 03 Jun 2019 09:22:45: #3 Call peaks... INFO @ Mon, 03 Jun 2019 09:22:45: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 09:22:46: #1 tags after filtering in treatment: 22817012 INFO @ Mon, 03 Jun 2019 09:22:46: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 09:22:46: #1 finished! INFO @ Mon, 03 Jun 2019 09:22:46: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 09:22:46: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 09:22:48: #2 number of paired peaks: 323 WARNING @ Mon, 03 Jun 2019 09:22:48: Fewer paired peaks (323) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 323 pairs to build model! INFO @ Mon, 03 Jun 2019 09:22:48: start model_add_line... INFO @ Mon, 03 Jun 2019 09:22:49: start X-correlation... INFO @ Mon, 03 Jun 2019 09:22:49: end of X-cor INFO @ Mon, 03 Jun 2019 09:22:49: #2 finished! INFO @ Mon, 03 Jun 2019 09:22:49: #2 predicted fragment length is 147 bps INFO @ Mon, 03 Jun 2019 09:22:49: #2 alternative fragment length(s) may be 147 bps INFO @ Mon, 03 Jun 2019 09:22:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20_model.r INFO @ Mon, 03 Jun 2019 09:22:49: #3 Call peaks... INFO @ Mon, 03 Jun 2019 09:22:49: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 09:22:49: #1 tag size is determined as 50 bps INFO @ Mon, 03 Jun 2019 09:22:49: #1 tag size = 50 INFO @ Mon, 03 Jun 2019 09:22:49: #1 total tags in treatment: 24907485 INFO @ Mon, 03 Jun 2019 09:22:49: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 09:22:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 09:22:49: #1 tags after filtering in treatment: 22817012 INFO @ Mon, 03 Jun 2019 09:22:49: #1 Redundant rate of treatment: 0.08 INFO @ Mon, 03 Jun 2019 09:22:49: #1 finished! INFO @ Mon, 03 Jun 2019 09:22:49: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 09:22:49: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 09:22:52: #2 number of paired peaks: 323 WARNING @ Mon, 03 Jun 2019 09:22:52: Fewer paired peaks (323) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 323 pairs to build model! INFO @ Mon, 03 Jun 2019 09:22:52: start model_add_line... INFO @ Mon, 03 Jun 2019 09:22:52: start X-correlation... INFO @ Mon, 03 Jun 2019 09:22:52: end of X-cor INFO @ Mon, 03 Jun 2019 09:22:52: #2 finished! INFO @ Mon, 03 Jun 2019 09:22:52: #2 predicted fragment length is 147 bps INFO @ Mon, 03 Jun 2019 09:22:52: #2 alternative fragment length(s) may be 147 bps INFO @ Mon, 03 Jun 2019 09:22:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05_model.r INFO @ Mon, 03 Jun 2019 09:22:52: #3 Call peaks... INFO @ Mon, 03 Jun 2019 09:22:52: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 09:24:05: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 09:24:09: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 09:24:12: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 09:24:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10_peaks.xls INFO @ Mon, 03 Jun 2019 09:24:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 09:24:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.10_summits.bed INFO @ Mon, 03 Jun 2019 09:24:42: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (1898 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 09:24:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20_peaks.xls INFO @ Mon, 03 Jun 2019 09:24:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 09:24:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.20_summits.bed INFO @ Mon, 03 Jun 2019 09:24:46: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1105 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 09:24:50: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05_peaks.xls INFO @ Mon, 03 Jun 2019 09:24:50: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 09:24:50: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX2612523/SRX2612523.05_summits.bed INFO @ Mon, 03 Jun 2019 09:24:50: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3048 records, 4 fields): 9 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。