Job ID = 10714538 sra ファイルのダウンロード中... Completed: 3761426K bytes transferred in 57 seconds (537830K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 64282019 spots for /home/okishinya/chipatlas/results/dm3/SRX1704843/SRR3383177.sra Written 64282019 spots for /home/okishinya/chipatlas/results/dm3/SRX1704843/SRR3383177.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:34:12 64282019 reads; of these: 64282019 (100.00%) were paired; of these: 5440332 (8.46%) aligned concordantly 0 times 45764356 (71.19%) aligned concordantly exactly 1 time 13077331 (20.34%) aligned concordantly >1 times ---- 5440332 pairs aligned concordantly 0 times; of these: 2056982 (37.81%) aligned discordantly 1 time ---- 3383350 pairs aligned 0 times concordantly or discordantly; of these: 6766700 mates make up the pairs; of these: 2706108 (39.99%) aligned 0 times 2326596 (34.38%) aligned exactly 1 time 1733996 (25.63%) aligned >1 times 97.90% overall alignment rate Time searching: 02:34:13 Overall time: 02:34:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 9552967 / 59363411 = 0.1609 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 16:32:34: # Command line: callpeak -t SRX1704843.bam -f BAM -g dm -n SRX1704843.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1704843.20 # format = BAM # ChIP-seq file = ['SRX1704843.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:32:34: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:32:34: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:32:34: # Command line: callpeak -t SRX1704843.bam -f BAM -g dm -n SRX1704843.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1704843.10 # format = BAM # ChIP-seq file = ['SRX1704843.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:32:34: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:32:34: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:32:34: # Command line: callpeak -t SRX1704843.bam -f BAM -g dm -n SRX1704843.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1704843.05 # format = BAM # ChIP-seq file = ['SRX1704843.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 16:32:34: #1 read tag files... INFO @ Sun, 03 Jun 2018 16:32:34: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 16:32:42: 1000000 INFO @ Sun, 03 Jun 2018 16:32:42: 1000000 INFO @ Sun, 03 Jun 2018 16:32:42: 1000000 INFO @ Sun, 03 Jun 2018 16:32:50: 2000000 INFO @ Sun, 03 Jun 2018 16:32:50: 2000000 INFO @ Sun, 03 Jun 2018 16:32:50: 2000000 INFO @ Sun, 03 Jun 2018 16:32:58: 3000000 INFO @ Sun, 03 Jun 2018 16:32:58: 3000000 INFO @ Sun, 03 Jun 2018 16:32:58: 3000000 INFO @ Sun, 03 Jun 2018 16:33:06: 4000000 INFO @ Sun, 03 Jun 2018 16:33:06: 4000000 INFO @ Sun, 03 Jun 2018 16:33:06: 4000000 INFO @ Sun, 03 Jun 2018 16:33:14: 5000000 INFO @ Sun, 03 Jun 2018 16:33:14: 5000000 INFO @ Sun, 03 Jun 2018 16:33:14: 5000000 INFO @ Sun, 03 Jun 2018 16:33:21: 6000000 INFO @ Sun, 03 Jun 2018 16:33:22: 6000000 INFO @ Sun, 03 Jun 2018 16:33:22: 6000000 INFO @ Sun, 03 Jun 2018 16:33:29: 7000000 INFO @ Sun, 03 Jun 2018 16:33:30: 7000000 INFO @ Sun, 03 Jun 2018 16:33:30: 7000000 INFO @ Sun, 03 Jun 2018 16:33:37: 8000000 INFO @ Sun, 03 Jun 2018 16:33:37: 8000000 INFO @ Sun, 03 Jun 2018 16:33:37: 8000000 INFO @ Sun, 03 Jun 2018 16:33:45: 9000000 INFO @ Sun, 03 Jun 2018 16:33:45: 9000000 INFO @ Sun, 03 Jun 2018 16:33:45: 9000000 INFO @ Sun, 03 Jun 2018 16:33:52: 10000000 INFO @ Sun, 03 Jun 2018 16:33:52: 10000000 INFO @ Sun, 03 Jun 2018 16:33:53: 10000000 INFO @ Sun, 03 Jun 2018 16:34:00: 11000000 INFO @ Sun, 03 Jun 2018 16:34:00: 11000000 INFO @ Sun, 03 Jun 2018 16:34:00: 11000000 INFO @ Sun, 03 Jun 2018 16:34:08: 12000000 INFO @ Sun, 03 Jun 2018 16:34:08: 12000000 INFO @ Sun, 03 Jun 2018 16:34:08: 12000000 INFO @ Sun, 03 Jun 2018 16:34:15: 13000000 INFO @ Sun, 03 Jun 2018 16:34:16: 13000000 INFO @ Sun, 03 Jun 2018 16:34:16: 13000000 INFO @ Sun, 03 Jun 2018 16:34:22: 14000000 INFO @ Sun, 03 Jun 2018 16:34:24: 14000000 INFO @ Sun, 03 Jun 2018 16:34:24: 14000000 INFO @ Sun, 03 Jun 2018 16:34:30: 15000000 INFO @ Sun, 03 Jun 2018 16:34:32: 15000000 INFO @ Sun, 03 Jun 2018 16:34:32: 15000000 INFO @ Sun, 03 Jun 2018 16:34:37: 16000000 INFO @ Sun, 03 Jun 2018 16:34:40: 16000000 INFO @ Sun, 03 Jun 2018 16:34:40: 16000000 INFO @ Sun, 03 Jun 2018 16:34:45: 17000000 INFO @ Sun, 03 Jun 2018 16:34:48: 17000000 INFO @ Sun, 03 Jun 2018 16:34:48: 17000000 INFO @ Sun, 03 Jun 2018 16:34:53: 18000000 INFO @ Sun, 03 Jun 2018 16:34:55: 18000000 INFO @ Sun, 03 Jun 2018 16:34:58: 18000000 INFO @ Sun, 03 Jun 2018 16:35:01: 19000000 INFO @ Sun, 03 Jun 2018 16:35:02: 19000000 INFO @ Sun, 03 Jun 2018 16:35:07: 19000000 INFO @ Sun, 03 Jun 2018 16:35:09: 20000000 INFO @ Sun, 03 Jun 2018 16:35:10: 20000000 INFO @ Sun, 03 Jun 2018 16:35:16: 20000000 INFO @ Sun, 03 Jun 2018 16:35:17: 21000000 INFO @ Sun, 03 Jun 2018 16:35:17: 21000000 INFO @ Sun, 03 Jun 2018 16:35:25: 22000000 INFO @ Sun, 03 Jun 2018 16:35:25: 22000000 INFO @ Sun, 03 Jun 2018 16:35:25: 21000000 INFO @ Sun, 03 Jun 2018 16:35:32: 23000000 INFO @ Sun, 03 Jun 2018 16:35:33: 23000000 INFO @ Sun, 03 Jun 2018 16:35:34: 22000000 INFO @ Sun, 03 Jun 2018 16:35:39: 24000000 INFO @ Sun, 03 Jun 2018 16:35:41: 24000000 INFO @ Sun, 03 Jun 2018 16:35:43: 23000000 INFO @ Sun, 03 Jun 2018 16:35:46: 25000000 INFO @ Sun, 03 Jun 2018 16:35:49: 25000000 INFO @ Sun, 03 Jun 2018 16:35:52: 24000000 INFO @ Sun, 03 Jun 2018 16:35:53: 26000000 INFO @ Sun, 03 Jun 2018 16:35:58: 26000000 INFO @ Sun, 03 Jun 2018 16:36:01: 27000000 INFO @ Sun, 03 Jun 2018 16:36:02: 25000000 INFO @ Sun, 03 Jun 2018 16:36:06: 27000000 INFO @ Sun, 03 Jun 2018 16:36:08: 28000000 INFO @ Sun, 03 Jun 2018 16:36:11: 26000000 INFO @ Sun, 03 Jun 2018 16:36:14: 28000000 INFO @ Sun, 03 Jun 2018 16:36:15: 29000000 INFO @ Sun, 03 Jun 2018 16:36:20: 27000000 INFO @ Sun, 03 Jun 2018 16:36:22: 30000000 INFO @ Sun, 03 Jun 2018 16:36:23: 29000000 INFO @ Sun, 03 Jun 2018 16:36:29: 31000000 INFO @ Sun, 03 Jun 2018 16:36:30: 28000000 INFO @ Sun, 03 Jun 2018 16:36:31: 30000000 INFO @ Sun, 03 Jun 2018 16:36:36: 32000000 INFO @ Sun, 03 Jun 2018 16:36:39: 29000000 INFO @ Sun, 03 Jun 2018 16:36:39: 31000000 INFO @ Sun, 03 Jun 2018 16:36:43: 33000000 INFO @ Sun, 03 Jun 2018 16:36:48: 32000000 INFO @ Sun, 03 Jun 2018 16:36:48: 30000000 INFO @ Sun, 03 Jun 2018 16:36:50: 34000000 INFO @ Sun, 03 Jun 2018 16:36:56: 33000000 INFO @ Sun, 03 Jun 2018 16:36:57: 35000000 INFO @ Sun, 03 Jun 2018 16:36:58: 31000000 INFO @ Sun, 03 Jun 2018 16:37:04: 34000000 INFO @ Sun, 03 Jun 2018 16:37:04: 36000000 INFO @ Sun, 03 Jun 2018 16:37:07: 32000000 INFO @ Sun, 03 Jun 2018 16:37:12: 37000000 INFO @ Sun, 03 Jun 2018 16:37:12: 35000000 INFO @ Sun, 03 Jun 2018 16:37:17: 33000000 INFO @ Sun, 03 Jun 2018 16:37:19: 38000000 INFO @ Sun, 03 Jun 2018 16:37:21: 36000000 INFO @ Sun, 03 Jun 2018 16:37:26: 34000000 INFO @ Sun, 03 Jun 2018 16:37:26: 39000000 INFO @ Sun, 03 Jun 2018 16:37:29: 37000000 INFO @ Sun, 03 Jun 2018 16:37:33: 40000000 INFO @ Sun, 03 Jun 2018 16:37:35: 35000000 INFO @ Sun, 03 Jun 2018 16:37:38: 38000000 INFO @ Sun, 03 Jun 2018 16:37:40: 41000000 INFO @ Sun, 03 Jun 2018 16:37:45: 36000000 INFO @ Sun, 03 Jun 2018 16:37:46: 39000000 INFO @ Sun, 03 Jun 2018 16:37:47: 42000000 INFO @ Sun, 03 Jun 2018 16:37:54: 37000000 INFO @ Sun, 03 Jun 2018 16:37:54: 40000000 INFO @ Sun, 03 Jun 2018 16:37:54: 43000000 INFO @ Sun, 03 Jun 2018 16:38:02: 44000000 INFO @ Sun, 03 Jun 2018 16:38:02: 41000000 INFO @ Sun, 03 Jun 2018 16:38:04: 38000000 INFO @ Sun, 03 Jun 2018 16:38:09: 45000000 INFO @ Sun, 03 Jun 2018 16:38:11: 42000000 INFO @ Sun, 03 Jun 2018 16:38:12: 39000000 INFO @ Sun, 03 Jun 2018 16:38:16: 46000000 INFO @ Sun, 03 Jun 2018 16:38:19: 43000000 INFO @ Sun, 03 Jun 2018 16:38:21: 40000000 INFO @ Sun, 03 Jun 2018 16:38:23: 47000000 INFO @ Sun, 03 Jun 2018 16:38:27: 44000000 INFO @ Sun, 03 Jun 2018 16:38:30: 41000000 INFO @ Sun, 03 Jun 2018 16:38:31: 48000000 INFO @ Sun, 03 Jun 2018 16:38:35: 45000000 INFO @ Sun, 03 Jun 2018 16:38:38: 49000000 INFO @ Sun, 03 Jun 2018 16:38:39: 42000000 INFO @ Sun, 03 Jun 2018 16:38:43: 46000000 INFO @ Sun, 03 Jun 2018 16:38:45: 50000000 INFO @ Sun, 03 Jun 2018 16:38:48: 43000000 INFO @ Sun, 03 Jun 2018 16:38:51: 47000000 INFO @ Sun, 03 Jun 2018 16:38:53: 51000000 INFO @ Sun, 03 Jun 2018 16:38:57: 44000000 INFO @ Sun, 03 Jun 2018 16:38:59: 48000000 INFO @ Sun, 03 Jun 2018 16:39:00: 52000000 INFO @ Sun, 03 Jun 2018 16:39:06: 45000000 INFO @ Sun, 03 Jun 2018 16:39:07: 53000000 INFO @ Sun, 03 Jun 2018 16:39:07: 49000000 INFO @ Sun, 03 Jun 2018 16:39:15: 54000000 INFO @ Sun, 03 Jun 2018 16:39:15: 46000000 INFO @ Sun, 03 Jun 2018 16:39:16: 50000000 INFO @ Sun, 03 Jun 2018 16:39:22: 55000000 INFO @ Sun, 03 Jun 2018 16:39:24: 51000000 INFO @ Sun, 03 Jun 2018 16:39:24: 47000000 INFO @ Sun, 03 Jun 2018 16:39:29: 56000000 INFO @ Sun, 03 Jun 2018 16:39:32: 52000000 INFO @ Sun, 03 Jun 2018 16:39:33: 48000000 INFO @ Sun, 03 Jun 2018 16:39:37: 57000000 INFO @ Sun, 03 Jun 2018 16:39:40: 53000000 INFO @ Sun, 03 Jun 2018 16:39:43: 49000000 INFO @ Sun, 03 Jun 2018 16:39:44: 58000000 INFO @ Sun, 03 Jun 2018 16:39:48: 54000000 INFO @ Sun, 03 Jun 2018 16:39:51: 59000000 INFO @ Sun, 03 Jun 2018 16:39:52: 50000000 INFO @ Sun, 03 Jun 2018 16:39:56: 55000000 INFO @ Sun, 03 Jun 2018 16:39:59: 60000000 INFO @ Sun, 03 Jun 2018 16:40:01: 51000000 INFO @ Sun, 03 Jun 2018 16:40:05: 56000000 INFO @ Sun, 03 Jun 2018 16:40:07: 61000000 INFO @ Sun, 03 Jun 2018 16:40:11: 52000000 INFO @ Sun, 03 Jun 2018 16:40:14: 57000000 INFO @ Sun, 03 Jun 2018 16:40:16: 62000000 INFO @ Sun, 03 Jun 2018 16:40:22: 53000000 INFO @ Sun, 03 Jun 2018 16:40:23: 58000000 INFO @ Sun, 03 Jun 2018 16:40:26: 63000000 INFO @ Sun, 03 Jun 2018 16:40:33: 59000000 INFO @ Sun, 03 Jun 2018 16:40:33: 54000000 INFO @ Sun, 03 Jun 2018 16:40:35: 64000000 INFO @ Sun, 03 Jun 2018 16:40:42: 60000000 INFO @ Sun, 03 Jun 2018 16:40:44: 65000000 INFO @ Sun, 03 Jun 2018 16:40:44: 55000000 INFO @ Sun, 03 Jun 2018 16:40:51: 61000000 INFO @ Sun, 03 Jun 2018 16:40:53: 66000000 INFO @ Sun, 03 Jun 2018 16:40:55: 56000000 INFO @ Sun, 03 Jun 2018 16:41:00: 62000000 INFO @ Sun, 03 Jun 2018 16:41:02: 67000000 INFO @ Sun, 03 Jun 2018 16:41:05: 57000000 INFO @ Sun, 03 Jun 2018 16:41:09: 63000000 INFO @ Sun, 03 Jun 2018 16:41:11: 68000000 INFO @ Sun, 03 Jun 2018 16:41:14: 58000000 INFO @ Sun, 03 Jun 2018 16:41:19: 64000000 INFO @ Sun, 03 Jun 2018 16:41:21: 69000000 INFO @ Sun, 03 Jun 2018 16:41:24: 59000000 INFO @ Sun, 03 Jun 2018 16:41:28: 65000000 INFO @ Sun, 03 Jun 2018 16:41:30: 70000000 INFO @ Sun, 03 Jun 2018 16:41:33: 60000000 INFO @ Sun, 03 Jun 2018 16:41:37: 66000000 INFO @ Sun, 03 Jun 2018 16:41:40: 71000000 INFO @ Sun, 03 Jun 2018 16:41:43: 61000000 INFO @ Sun, 03 Jun 2018 16:41:47: 67000000 INFO @ Sun, 03 Jun 2018 16:41:49: 72000000 INFO @ Sun, 03 Jun 2018 16:41:52: 62000000 INFO @ Sun, 03 Jun 2018 16:41:56: 68000000 INFO @ Sun, 03 Jun 2018 16:41:59: 73000000 INFO @ Sun, 03 Jun 2018 16:42:02: 63000000 INFO @ Sun, 03 Jun 2018 16:42:05: 69000000 INFO @ Sun, 03 Jun 2018 16:42:09: 74000000 INFO @ Sun, 03 Jun 2018 16:42:11: 64000000 INFO @ Sun, 03 Jun 2018 16:42:15: 70000000 INFO @ Sun, 03 Jun 2018 16:42:19: 65000000 INFO @ Sun, 03 Jun 2018 16:42:20: 75000000 INFO @ Sun, 03 Jun 2018 16:42:24: 71000000 INFO @ Sun, 03 Jun 2018 16:42:27: 66000000 INFO @ Sun, 03 Jun 2018 16:42:31: 76000000 INFO @ Sun, 03 Jun 2018 16:42:33: 72000000 INFO @ Sun, 03 Jun 2018 16:42:35: 67000000 INFO @ Sun, 03 Jun 2018 16:42:42: 73000000 INFO @ Sun, 03 Jun 2018 16:42:42: 68000000 INFO @ Sun, 03 Jun 2018 16:42:43: 77000000 INFO @ Sun, 03 Jun 2018 16:42:50: 69000000 INFO @ Sun, 03 Jun 2018 16:42:52: 74000000 INFO @ Sun, 03 Jun 2018 16:42:54: 78000000 INFO @ Sun, 03 Jun 2018 16:42:58: 70000000 INFO @ Sun, 03 Jun 2018 16:43:02: 75000000 INFO @ Sun, 03 Jun 2018 16:43:05: 79000000 INFO @ Sun, 03 Jun 2018 16:43:07: 71000000 INFO @ Sun, 03 Jun 2018 16:43:11: 76000000 INFO @ Sun, 03 Jun 2018 16:43:15: 72000000 INFO @ Sun, 03 Jun 2018 16:43:17: 80000000 INFO @ Sun, 03 Jun 2018 16:43:21: 77000000 INFO @ Sun, 03 Jun 2018 16:43:23: 73000000 INFO @ Sun, 03 Jun 2018 16:43:29: 81000000 INFO @ Sun, 03 Jun 2018 16:43:31: 78000000 INFO @ Sun, 03 Jun 2018 16:43:35: 74000000 INFO @ Sun, 03 Jun 2018 16:43:40: 79000000 INFO @ Sun, 03 Jun 2018 16:43:41: 82000000 INFO @ Sun, 03 Jun 2018 16:43:43: 75000000 INFO @ Sun, 03 Jun 2018 16:43:50: 80000000 INFO @ Sun, 03 Jun 2018 16:43:51: 76000000 INFO @ Sun, 03 Jun 2018 16:43:52: 83000000 INFO @ Sun, 03 Jun 2018 16:43:59: 77000000 INFO @ Sun, 03 Jun 2018 16:43:59: 81000000 INFO @ Sun, 03 Jun 2018 16:44:04: 84000000 INFO @ Sun, 03 Jun 2018 16:44:08: 78000000 INFO @ Sun, 03 Jun 2018 16:44:09: 82000000 INFO @ Sun, 03 Jun 2018 16:44:15: 85000000 INFO @ Sun, 03 Jun 2018 16:44:17: 79000000 INFO @ Sun, 03 Jun 2018 16:44:18: 83000000 INFO @ Sun, 03 Jun 2018 16:44:25: 80000000 INFO @ Sun, 03 Jun 2018 16:44:26: 86000000 INFO @ Sun, 03 Jun 2018 16:44:28: 84000000 INFO @ Sun, 03 Jun 2018 16:44:34: 81000000 INFO @ Sun, 03 Jun 2018 16:44:37: 85000000 INFO @ Sun, 03 Jun 2018 16:44:38: 87000000 INFO @ Sun, 03 Jun 2018 16:44:43: 82000000 INFO @ Sun, 03 Jun 2018 16:44:47: 86000000 INFO @ Sun, 03 Jun 2018 16:44:49: 88000000 INFO @ Sun, 03 Jun 2018 16:44:54: 83000000 INFO @ Sun, 03 Jun 2018 16:44:57: 87000000 INFO @ Sun, 03 Jun 2018 16:45:01: 89000000 INFO @ Sun, 03 Jun 2018 16:45:06: 84000000 INFO @ Sun, 03 Jun 2018 16:45:07: 88000000 INFO @ Sun, 03 Jun 2018 16:45:13: 90000000 INFO @ Sun, 03 Jun 2018 16:45:17: 89000000 INFO @ Sun, 03 Jun 2018 16:45:18: 85000000 INFO @ Sun, 03 Jun 2018 16:45:25: 91000000 INFO @ Sun, 03 Jun 2018 16:45:27: 90000000 INFO @ Sun, 03 Jun 2018 16:45:29: 86000000 INFO @ Sun, 03 Jun 2018 16:45:37: 92000000 INFO @ Sun, 03 Jun 2018 16:45:37: 91000000 INFO @ Sun, 03 Jun 2018 16:45:41: 87000000 INFO @ Sun, 03 Jun 2018 16:45:46: 92000000 INFO @ Sun, 03 Jun 2018 16:45:48: 93000000 INFO @ Sun, 03 Jun 2018 16:45:54: 88000000 INFO @ Sun, 03 Jun 2018 16:45:56: 93000000 INFO @ Sun, 03 Jun 2018 16:46:01: 94000000 INFO @ Sun, 03 Jun 2018 16:46:06: 89000000 INFO @ Sun, 03 Jun 2018 16:46:06: 94000000 INFO @ Sun, 03 Jun 2018 16:46:13: 95000000 INFO @ Sun, 03 Jun 2018 16:46:16: 95000000 INFO @ Sun, 03 Jun 2018 16:46:18: 90000000 INFO @ Sun, 03 Jun 2018 16:46:25: 96000000 INFO @ Sun, 03 Jun 2018 16:46:25: 96000000 INFO @ Sun, 03 Jun 2018 16:46:30: 91000000 INFO @ Sun, 03 Jun 2018 16:46:35: 97000000 INFO @ Sun, 03 Jun 2018 16:46:37: 97000000 INFO @ Sun, 03 Jun 2018 16:46:42: 92000000 INFO @ Sun, 03 Jun 2018 16:46:45: 98000000 INFO @ Sun, 03 Jun 2018 16:46:48: 98000000 INFO @ Sun, 03 Jun 2018 16:46:53: 93000000 INFO @ Sun, 03 Jun 2018 16:46:54: 99000000 INFO @ Sun, 03 Jun 2018 16:46:59: 99000000 INFO @ Sun, 03 Jun 2018 16:47:03: 100000000 INFO @ Sun, 03 Jun 2018 16:47:05: 94000000 INFO @ Sun, 03 Jun 2018 16:47:10: 100000000 INFO @ Sun, 03 Jun 2018 16:47:12: 101000000 INFO @ Sun, 03 Jun 2018 16:47:16: 95000000 INFO @ Sun, 03 Jun 2018 16:47:21: 101000000 INFO @ Sun, 03 Jun 2018 16:47:21: 102000000 INFO @ Sun, 03 Jun 2018 16:47:27: 96000000 INFO @ Sun, 03 Jun 2018 16:47:31: 103000000 INFO @ Sun, 03 Jun 2018 16:47:32: 102000000 INFO @ Sun, 03 Jun 2018 16:47:38: 97000000 INFO @ Sun, 03 Jun 2018 16:47:39: 104000000 INFO @ Sun, 03 Jun 2018 16:47:42: 103000000 INFO @ Sun, 03 Jun 2018 16:47:48: 105000000 INFO @ Sun, 03 Jun 2018 16:47:48: 98000000 INFO @ Sun, 03 Jun 2018 16:47:52: 104000000 INFO @ Sun, 03 Jun 2018 16:47:57: 106000000 INFO @ Sun, 03 Jun 2018 16:47:58: 99000000 INFO @ Sun, 03 Jun 2018 16:48:02: 105000000 INFO @ Sun, 03 Jun 2018 16:48:04: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 16:48:04: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 16:48:04: #1 total tags in treatment: 49311287 INFO @ Sun, 03 Jun 2018 16:48:04: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:48:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:48:05: #1 tags after filtering in treatment: 26803103 INFO @ Sun, 03 Jun 2018 16:48:05: #1 Redundant rate of treatment: 0.46 INFO @ Sun, 03 Jun 2018 16:48:05: #1 finished! INFO @ Sun, 03 Jun 2018 16:48:05: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:48:05: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:48:07: #2 number of paired peaks: 4 WARNING @ Sun, 03 Jun 2018 16:48:07: Too few paired peaks (4) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:48:07: Process for pairing-model is terminated! cat: SRX1704843.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1704843.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 16:48:08: 100000000 INFO @ Sun, 03 Jun 2018 16:48:11: 106000000 INFO @ Sun, 03 Jun 2018 16:48:16: 101000000 INFO @ Sun, 03 Jun 2018 16:48:18: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 16:48:18: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 16:48:18: #1 total tags in treatment: 49311287 INFO @ Sun, 03 Jun 2018 16:48:18: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:48:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:48:19: #1 tags after filtering in treatment: 26803103 INFO @ Sun, 03 Jun 2018 16:48:19: #1 Redundant rate of treatment: 0.46 INFO @ Sun, 03 Jun 2018 16:48:19: #1 finished! INFO @ Sun, 03 Jun 2018 16:48:19: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:48:19: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:48:21: #2 number of paired peaks: 4 WARNING @ Sun, 03 Jun 2018 16:48:21: Too few paired peaks (4) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:48:21: Process for pairing-model is terminated! cat: SRX1704843.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1704843.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 16:48:24: 102000000 INFO @ Sun, 03 Jun 2018 16:48:31: 103000000 INFO @ Sun, 03 Jun 2018 16:48:39: 104000000 INFO @ Sun, 03 Jun 2018 16:48:47: 105000000 INFO @ Sun, 03 Jun 2018 16:48:54: 106000000 INFO @ Sun, 03 Jun 2018 16:49:00: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 16:49:00: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 16:49:00: #1 total tags in treatment: 49311287 INFO @ Sun, 03 Jun 2018 16:49:00: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 16:49:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 16:49:02: #1 tags after filtering in treatment: 26803103 INFO @ Sun, 03 Jun 2018 16:49:02: #1 Redundant rate of treatment: 0.46 INFO @ Sun, 03 Jun 2018 16:49:02: #1 finished! INFO @ Sun, 03 Jun 2018 16:49:02: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 16:49:02: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 16:49:03: #2 number of paired peaks: 4 WARNING @ Sun, 03 Jun 2018 16:49:03: Too few paired peaks (4) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 16:49:03: Process for pairing-model is terminated! cat: SRX1704843.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1704843.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1704843.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。