Job ID = 10714529 sra ファイルのダウンロード中... Completed: 3005114K bytes transferred in 37 seconds (652637K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 51383051 spots for /home/okishinya/chipatlas/results/dm3/SRX1619253/SRR3211629.sra Written 51383051 spots for /home/okishinya/chipatlas/results/dm3/SRX1619253/SRR3211629.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:59:15 51383051 reads; of these: 51383051 (100.00%) were paired; of these: 2365288 (4.60%) aligned concordantly 0 times 38131696 (74.21%) aligned concordantly exactly 1 time 10886067 (21.19%) aligned concordantly >1 times ---- 2365288 pairs aligned concordantly 0 times; of these: 497574 (21.04%) aligned discordantly 1 time ---- 1867714 pairs aligned 0 times concordantly or discordantly; of these: 3735428 mates make up the pairs; of these: 1947814 (52.14%) aligned 0 times 1142968 (30.60%) aligned exactly 1 time 644646 (17.26%) aligned >1 times 98.10% overall alignment rate Time searching: 01:59:15 Overall time: 01:59:15 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 8327852 / 49304813 = 0.1689 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 15:41:21: # Command line: callpeak -t SRX1619253.bam -f BAM -g dm -n SRX1619253.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1619253.05 # format = BAM # ChIP-seq file = ['SRX1619253.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 15:41:21: #1 read tag files... INFO @ Sun, 03 Jun 2018 15:41:21: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 15:41:21: # Command line: callpeak -t SRX1619253.bam -f BAM -g dm -n SRX1619253.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1619253.20 # format = BAM # ChIP-seq file = ['SRX1619253.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 15:41:21: #1 read tag files... INFO @ Sun, 03 Jun 2018 15:41:21: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 15:41:21: # Command line: callpeak -t SRX1619253.bam -f BAM -g dm -n SRX1619253.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1619253.10 # format = BAM # ChIP-seq file = ['SRX1619253.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 15:41:21: #1 read tag files... INFO @ Sun, 03 Jun 2018 15:41:21: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 15:41:27: 1000000 INFO @ Sun, 03 Jun 2018 15:41:28: 1000000 INFO @ Sun, 03 Jun 2018 15:41:28: 1000000 INFO @ Sun, 03 Jun 2018 15:41:33: 2000000 INFO @ Sun, 03 Jun 2018 15:41:34: 2000000 INFO @ Sun, 03 Jun 2018 15:41:34: 2000000 INFO @ Sun, 03 Jun 2018 15:41:39: 3000000 INFO @ Sun, 03 Jun 2018 15:41:41: 3000000 INFO @ Sun, 03 Jun 2018 15:41:41: 3000000 INFO @ Sun, 03 Jun 2018 15:41:45: 4000000 INFO @ Sun, 03 Jun 2018 15:41:48: 4000000 INFO @ Sun, 03 Jun 2018 15:41:48: 4000000 INFO @ Sun, 03 Jun 2018 15:41:51: 5000000 INFO @ Sun, 03 Jun 2018 15:41:55: 5000000 INFO @ Sun, 03 Jun 2018 15:41:55: 5000000 INFO @ Sun, 03 Jun 2018 15:41:58: 6000000 INFO @ Sun, 03 Jun 2018 15:42:02: 6000000 INFO @ Sun, 03 Jun 2018 15:42:02: 6000000 INFO @ Sun, 03 Jun 2018 15:42:04: 7000000 INFO @ Sun, 03 Jun 2018 15:42:09: 7000000 INFO @ Sun, 03 Jun 2018 15:42:09: 7000000 INFO @ Sun, 03 Jun 2018 15:42:10: 8000000 INFO @ Sun, 03 Jun 2018 15:42:16: 9000000 INFO @ Sun, 03 Jun 2018 15:42:16: 8000000 INFO @ Sun, 03 Jun 2018 15:42:16: 8000000 INFO @ Sun, 03 Jun 2018 15:42:22: 10000000 INFO @ Sun, 03 Jun 2018 15:42:23: 9000000 INFO @ Sun, 03 Jun 2018 15:42:23: 9000000 INFO @ Sun, 03 Jun 2018 15:42:28: 11000000 INFO @ Sun, 03 Jun 2018 15:42:30: 10000000 INFO @ Sun, 03 Jun 2018 15:42:30: 10000000 INFO @ Sun, 03 Jun 2018 15:42:34: 12000000 INFO @ Sun, 03 Jun 2018 15:42:37: 11000000 INFO @ Sun, 03 Jun 2018 15:42:37: 11000000 INFO @ Sun, 03 Jun 2018 15:42:41: 13000000 INFO @ Sun, 03 Jun 2018 15:42:44: 12000000 INFO @ Sun, 03 Jun 2018 15:42:44: 12000000 INFO @ Sun, 03 Jun 2018 15:42:47: 14000000 INFO @ Sun, 03 Jun 2018 15:42:51: 13000000 INFO @ Sun, 03 Jun 2018 15:42:51: 13000000 INFO @ Sun, 03 Jun 2018 15:42:53: 15000000 INFO @ Sun, 03 Jun 2018 15:42:58: 14000000 INFO @ Sun, 03 Jun 2018 15:42:58: 14000000 INFO @ Sun, 03 Jun 2018 15:42:59: 16000000 INFO @ Sun, 03 Jun 2018 15:43:05: 15000000 INFO @ Sun, 03 Jun 2018 15:43:05: 15000000 INFO @ Sun, 03 Jun 2018 15:43:05: 17000000 INFO @ Sun, 03 Jun 2018 15:43:11: 18000000 INFO @ Sun, 03 Jun 2018 15:43:12: 16000000 INFO @ Sun, 03 Jun 2018 15:43:12: 16000000 INFO @ Sun, 03 Jun 2018 15:43:18: 19000000 INFO @ Sun, 03 Jun 2018 15:43:19: 17000000 INFO @ Sun, 03 Jun 2018 15:43:19: 17000000 INFO @ Sun, 03 Jun 2018 15:43:24: 20000000 INFO @ Sun, 03 Jun 2018 15:43:26: 18000000 INFO @ Sun, 03 Jun 2018 15:43:26: 18000000 INFO @ Sun, 03 Jun 2018 15:43:30: 21000000 INFO @ Sun, 03 Jun 2018 15:43:33: 19000000 INFO @ Sun, 03 Jun 2018 15:43:33: 19000000 INFO @ Sun, 03 Jun 2018 15:43:36: 22000000 INFO @ Sun, 03 Jun 2018 15:43:40: 20000000 INFO @ Sun, 03 Jun 2018 15:43:40: 20000000 INFO @ Sun, 03 Jun 2018 15:43:43: 23000000 INFO @ Sun, 03 Jun 2018 15:43:47: 21000000 INFO @ Sun, 03 Jun 2018 15:43:47: 21000000 INFO @ Sun, 03 Jun 2018 15:43:49: 24000000 INFO @ Sun, 03 Jun 2018 15:43:54: 22000000 INFO @ Sun, 03 Jun 2018 15:43:54: 22000000 INFO @ Sun, 03 Jun 2018 15:43:55: 25000000 INFO @ Sun, 03 Jun 2018 15:44:01: 23000000 INFO @ Sun, 03 Jun 2018 15:44:01: 23000000 INFO @ Sun, 03 Jun 2018 15:44:02: 26000000 INFO @ Sun, 03 Jun 2018 15:44:08: 24000000 INFO @ Sun, 03 Jun 2018 15:44:08: 24000000 INFO @ Sun, 03 Jun 2018 15:44:08: 27000000 INFO @ Sun, 03 Jun 2018 15:44:14: 28000000 INFO @ Sun, 03 Jun 2018 15:44:15: 25000000 INFO @ Sun, 03 Jun 2018 15:44:15: 25000000 INFO @ Sun, 03 Jun 2018 15:44:21: 29000000 INFO @ Sun, 03 Jun 2018 15:44:22: 26000000 INFO @ Sun, 03 Jun 2018 15:44:22: 26000000 INFO @ Sun, 03 Jun 2018 15:44:27: 30000000 INFO @ Sun, 03 Jun 2018 15:44:29: 27000000 INFO @ Sun, 03 Jun 2018 15:44:29: 27000000 INFO @ Sun, 03 Jun 2018 15:44:33: 31000000 INFO @ Sun, 03 Jun 2018 15:44:36: 28000000 INFO @ Sun, 03 Jun 2018 15:44:36: 28000000 INFO @ Sun, 03 Jun 2018 15:44:39: 32000000 INFO @ Sun, 03 Jun 2018 15:44:43: 29000000 INFO @ Sun, 03 Jun 2018 15:44:43: 29000000 INFO @ Sun, 03 Jun 2018 15:44:45: 33000000 INFO @ Sun, 03 Jun 2018 15:44:50: 30000000 INFO @ Sun, 03 Jun 2018 15:44:50: 30000000 INFO @ Sun, 03 Jun 2018 15:44:52: 34000000 INFO @ Sun, 03 Jun 2018 15:44:57: 31000000 INFO @ Sun, 03 Jun 2018 15:44:57: 31000000 INFO @ Sun, 03 Jun 2018 15:44:58: 35000000 INFO @ Sun, 03 Jun 2018 15:45:04: 32000000 INFO @ Sun, 03 Jun 2018 15:45:04: 32000000 INFO @ Sun, 03 Jun 2018 15:45:04: 36000000 INFO @ Sun, 03 Jun 2018 15:45:10: 37000000 INFO @ Sun, 03 Jun 2018 15:45:11: 33000000 INFO @ Sun, 03 Jun 2018 15:45:11: 33000000 INFO @ Sun, 03 Jun 2018 15:45:17: 38000000 INFO @ Sun, 03 Jun 2018 15:45:18: 34000000 INFO @ Sun, 03 Jun 2018 15:45:18: 34000000 INFO @ Sun, 03 Jun 2018 15:45:23: 39000000 INFO @ Sun, 03 Jun 2018 15:45:25: 35000000 INFO @ Sun, 03 Jun 2018 15:45:25: 35000000 INFO @ Sun, 03 Jun 2018 15:45:29: 40000000 INFO @ Sun, 03 Jun 2018 15:45:32: 36000000 INFO @ Sun, 03 Jun 2018 15:45:32: 36000000 INFO @ Sun, 03 Jun 2018 15:45:35: 41000000 INFO @ Sun, 03 Jun 2018 15:45:39: 37000000 INFO @ Sun, 03 Jun 2018 15:45:39: 37000000 INFO @ Sun, 03 Jun 2018 15:45:41: 42000000 INFO @ Sun, 03 Jun 2018 15:45:46: 38000000 INFO @ Sun, 03 Jun 2018 15:45:46: 38000000 INFO @ Sun, 03 Jun 2018 15:45:48: 43000000 INFO @ Sun, 03 Jun 2018 15:45:53: 39000000 INFO @ Sun, 03 Jun 2018 15:45:53: 39000000 INFO @ Sun, 03 Jun 2018 15:45:54: 44000000 INFO @ Sun, 03 Jun 2018 15:46:00: 40000000 INFO @ Sun, 03 Jun 2018 15:46:00: 40000000 INFO @ Sun, 03 Jun 2018 15:46:00: 45000000 INFO @ Sun, 03 Jun 2018 15:46:06: 46000000 INFO @ Sun, 03 Jun 2018 15:46:07: 41000000 INFO @ Sun, 03 Jun 2018 15:46:07: 41000000 INFO @ Sun, 03 Jun 2018 15:46:13: 47000000 INFO @ Sun, 03 Jun 2018 15:46:14: 42000000 INFO @ Sun, 03 Jun 2018 15:46:14: 42000000 INFO @ Sun, 03 Jun 2018 15:46:19: 48000000 INFO @ Sun, 03 Jun 2018 15:46:21: 43000000 INFO @ Sun, 03 Jun 2018 15:46:21: 43000000 INFO @ Sun, 03 Jun 2018 15:46:25: 49000000 INFO @ Sun, 03 Jun 2018 15:46:28: 44000000 INFO @ Sun, 03 Jun 2018 15:46:28: 44000000 INFO @ Sun, 03 Jun 2018 15:46:31: 50000000 INFO @ Sun, 03 Jun 2018 15:46:34: 45000000 INFO @ Sun, 03 Jun 2018 15:46:34: 45000000 INFO @ Sun, 03 Jun 2018 15:46:37: 51000000 INFO @ Sun, 03 Jun 2018 15:46:41: 46000000 INFO @ Sun, 03 Jun 2018 15:46:41: 46000000 INFO @ Sun, 03 Jun 2018 15:46:43: 52000000 INFO @ Sun, 03 Jun 2018 15:46:48: 47000000 INFO @ Sun, 03 Jun 2018 15:46:48: 47000000 INFO @ Sun, 03 Jun 2018 15:46:50: 53000000 INFO @ Sun, 03 Jun 2018 15:46:55: 48000000 INFO @ Sun, 03 Jun 2018 15:46:55: 48000000 INFO @ Sun, 03 Jun 2018 15:46:56: 54000000 INFO @ Sun, 03 Jun 2018 15:47:02: 49000000 INFO @ Sun, 03 Jun 2018 15:47:02: 49000000 INFO @ Sun, 03 Jun 2018 15:47:02: 55000000 INFO @ Sun, 03 Jun 2018 15:47:09: 56000000 INFO @ Sun, 03 Jun 2018 15:47:09: 50000000 INFO @ Sun, 03 Jun 2018 15:47:09: 50000000 INFO @ Sun, 03 Jun 2018 15:47:15: 57000000 INFO @ Sun, 03 Jun 2018 15:47:17: 51000000 INFO @ Sun, 03 Jun 2018 15:47:17: 51000000 INFO @ Sun, 03 Jun 2018 15:47:21: 58000000 INFO @ Sun, 03 Jun 2018 15:47:24: 52000000 INFO @ Sun, 03 Jun 2018 15:47:24: 52000000 INFO @ Sun, 03 Jun 2018 15:47:28: 59000000 INFO @ Sun, 03 Jun 2018 15:47:32: 53000000 INFO @ Sun, 03 Jun 2018 15:47:32: 53000000 INFO @ Sun, 03 Jun 2018 15:47:35: 60000000 INFO @ Sun, 03 Jun 2018 15:47:39: 54000000 INFO @ Sun, 03 Jun 2018 15:47:39: 54000000 INFO @ Sun, 03 Jun 2018 15:47:41: 61000000 INFO @ Sun, 03 Jun 2018 15:47:46: 55000000 INFO @ Sun, 03 Jun 2018 15:47:46: 55000000 INFO @ Sun, 03 Jun 2018 15:47:47: 62000000 INFO @ Sun, 03 Jun 2018 15:47:53: 56000000 INFO @ Sun, 03 Jun 2018 15:47:53: 56000000 INFO @ Sun, 03 Jun 2018 15:47:54: 63000000 INFO @ Sun, 03 Jun 2018 15:48:00: 57000000 INFO @ Sun, 03 Jun 2018 15:48:00: 57000000 INFO @ Sun, 03 Jun 2018 15:48:00: 64000000 INFO @ Sun, 03 Jun 2018 15:48:07: 65000000 INFO @ Sun, 03 Jun 2018 15:48:07: 58000000 INFO @ Sun, 03 Jun 2018 15:48:07: 58000000 INFO @ Sun, 03 Jun 2018 15:48:13: 66000000 INFO @ Sun, 03 Jun 2018 15:48:14: 59000000 INFO @ Sun, 03 Jun 2018 15:48:14: 59000000 INFO @ Sun, 03 Jun 2018 15:48:19: 67000000 INFO @ Sun, 03 Jun 2018 15:48:22: 60000000 INFO @ Sun, 03 Jun 2018 15:48:22: 60000000 INFO @ Sun, 03 Jun 2018 15:48:26: 68000000 INFO @ Sun, 03 Jun 2018 15:48:29: 61000000 INFO @ Sun, 03 Jun 2018 15:48:29: 61000000 INFO @ Sun, 03 Jun 2018 15:48:32: 69000000 INFO @ Sun, 03 Jun 2018 15:48:36: 62000000 INFO @ Sun, 03 Jun 2018 15:48:36: 62000000 INFO @ Sun, 03 Jun 2018 15:48:38: 70000000 INFO @ Sun, 03 Jun 2018 15:48:43: 63000000 INFO @ Sun, 03 Jun 2018 15:48:43: 63000000 INFO @ Sun, 03 Jun 2018 15:48:45: 71000000 INFO @ Sun, 03 Jun 2018 15:48:50: 64000000 INFO @ Sun, 03 Jun 2018 15:48:50: 64000000 INFO @ Sun, 03 Jun 2018 15:48:51: 72000000 INFO @ Sun, 03 Jun 2018 15:48:57: 65000000 INFO @ Sun, 03 Jun 2018 15:48:57: 65000000 INFO @ Sun, 03 Jun 2018 15:48:58: 73000000 INFO @ Sun, 03 Jun 2018 15:49:04: 74000000 INFO @ Sun, 03 Jun 2018 15:49:05: 66000000 INFO @ Sun, 03 Jun 2018 15:49:05: 66000000 INFO @ Sun, 03 Jun 2018 15:49:10: 75000000 INFO @ Sun, 03 Jun 2018 15:49:12: 67000000 INFO @ Sun, 03 Jun 2018 15:49:12: 67000000 INFO @ Sun, 03 Jun 2018 15:49:17: 76000000 INFO @ Sun, 03 Jun 2018 15:49:19: 68000000 INFO @ Sun, 03 Jun 2018 15:49:19: 68000000 INFO @ Sun, 03 Jun 2018 15:49:24: 77000000 INFO @ Sun, 03 Jun 2018 15:49:27: 69000000 INFO @ Sun, 03 Jun 2018 15:49:27: 69000000 INFO @ Sun, 03 Jun 2018 15:49:32: 78000000 INFO @ Sun, 03 Jun 2018 15:49:35: 70000000 INFO @ Sun, 03 Jun 2018 15:49:35: 70000000 INFO @ Sun, 03 Jun 2018 15:49:40: 79000000 INFO @ Sun, 03 Jun 2018 15:49:44: 71000000 INFO @ Sun, 03 Jun 2018 15:49:44: 71000000 INFO @ Sun, 03 Jun 2018 15:49:47: 80000000 INFO @ Sun, 03 Jun 2018 15:49:52: 72000000 INFO @ Sun, 03 Jun 2018 15:49:52: 72000000 INFO @ Sun, 03 Jun 2018 15:49:55: 81000000 INFO @ Sun, 03 Jun 2018 15:50:00: 73000000 INFO @ Sun, 03 Jun 2018 15:50:00: 73000000 INFO @ Sun, 03 Jun 2018 15:50:03: 82000000 INFO @ Sun, 03 Jun 2018 15:50:09: 74000000 INFO @ Sun, 03 Jun 2018 15:50:09: 74000000 INFO @ Sun, 03 Jun 2018 15:50:10: 83000000 INFO @ Sun, 03 Jun 2018 15:50:17: 75000000 INFO @ Sun, 03 Jun 2018 15:50:17: 75000000 INFO @ Sun, 03 Jun 2018 15:50:18: 84000000 INFO @ Sun, 03 Jun 2018 15:50:20: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:50:20: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:50:20: #1 total tags in treatment: 40701606 INFO @ Sun, 03 Jun 2018 15:50:20: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:50:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:50:21: #1 tags after filtering in treatment: 21674352 INFO @ Sun, 03 Jun 2018 15:50:21: #1 Redundant rate of treatment: 0.47 INFO @ Sun, 03 Jun 2018 15:50:21: #1 finished! INFO @ Sun, 03 Jun 2018 15:50:21: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:50:21: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:50:22: #2 number of paired peaks: 22 WARNING @ Sun, 03 Jun 2018 15:50:22: Too few paired peaks (22) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:50:22: Process for pairing-model is terminated! cat: SRX1619253.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1619253.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 15:50:24: 76000000 INFO @ Sun, 03 Jun 2018 15:50:24: 76000000 INFO @ Sun, 03 Jun 2018 15:50:31: 77000000 INFO @ Sun, 03 Jun 2018 15:50:31: 77000000 INFO @ Sun, 03 Jun 2018 15:50:39: 78000000 INFO @ Sun, 03 Jun 2018 15:50:39: 78000000 INFO @ Sun, 03 Jun 2018 15:50:46: 79000000 INFO @ Sun, 03 Jun 2018 15:50:46: 79000000 INFO @ Sun, 03 Jun 2018 15:50:53: 80000000 INFO @ Sun, 03 Jun 2018 15:50:53: 80000000 INFO @ Sun, 03 Jun 2018 15:51:00: 81000000 INFO @ Sun, 03 Jun 2018 15:51:00: 81000000 INFO @ Sun, 03 Jun 2018 15:51:08: 82000000 INFO @ Sun, 03 Jun 2018 15:51:08: 82000000 INFO @ Sun, 03 Jun 2018 15:51:15: 83000000 INFO @ Sun, 03 Jun 2018 15:51:15: 83000000 INFO @ Sun, 03 Jun 2018 15:51:22: 84000000 INFO @ Sun, 03 Jun 2018 15:51:22: 84000000 INFO @ Sun, 03 Jun 2018 15:51:24: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:51:24: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:51:24: #1 total tags in treatment: 40701606 INFO @ Sun, 03 Jun 2018 15:51:24: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:51:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:51:24: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 15:51:24: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 15:51:24: #1 total tags in treatment: 40701606 INFO @ Sun, 03 Jun 2018 15:51:24: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 15:51:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 15:51:25: #1 tags after filtering in treatment: 21674352 INFO @ Sun, 03 Jun 2018 15:51:25: #1 Redundant rate of treatment: 0.47 INFO @ Sun, 03 Jun 2018 15:51:25: #1 finished! INFO @ Sun, 03 Jun 2018 15:51:25: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:51:25: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:51:25: #1 tags after filtering in treatment: 21674352 INFO @ Sun, 03 Jun 2018 15:51:25: #1 Redundant rate of treatment: 0.47 INFO @ Sun, 03 Jun 2018 15:51:25: #1 finished! INFO @ Sun, 03 Jun 2018 15:51:25: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 15:51:25: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 15:51:26: #2 number of paired peaks: 22 WARNING @ Sun, 03 Jun 2018 15:51:26: Too few paired peaks (22) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:51:26: Process for pairing-model is terminated! cat: SRX1619253.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません INFO @ Sun, 03 Jun 2018 15:51:26: #2 number of paired peaks: 22 WARNING @ Sun, 03 Jun 2018 15:51:26: Too few paired peaks (22) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 15:51:26: Process for pairing-model is terminated! pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1619253.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling cat: SRX1619253.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1619253.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1619253.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。