Job ID = 16437558 SRX = SRX14339043 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 65981532 spots for SRR18192453/SRR18192453.sra Written 65981532 spots for SRR18192453/SRR18192453.sra fastq に変換しました。 bowtie でマッピング中... Your job 16438915 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:17:49 65981532 reads; of these: 65981532 (100.00%) were paired; of these: 17651995 (26.75%) aligned concordantly 0 times 41003529 (62.14%) aligned concordantly exactly 1 time 7326008 (11.10%) aligned concordantly >1 times ---- 17651995 pairs aligned concordantly 0 times; of these: 8438808 (47.81%) aligned discordantly 1 time ---- 9213187 pairs aligned 0 times concordantly or discordantly; of these: 18426374 mates make up the pairs; of these: 13196298 (71.62%) aligned 0 times 2997236 (16.27%) aligned exactly 1 time 2232840 (12.12%) aligned >1 times 90.00% overall alignment rate Time searching: 01:17:49 Overall time: 01:17:49 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 24043431 / 56443539 = 0.4260 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 14:26:36: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 14:26:36: #1 read tag files... INFO @ Tue, 02 Aug 2022 14:26:36: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 14:26:42: 1000000 INFO @ Tue, 02 Aug 2022 14:26:48: 2000000 INFO @ Tue, 02 Aug 2022 14:26:54: 3000000 INFO @ Tue, 02 Aug 2022 14:27:00: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 14:27:06: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 14:27:06: #1 read tag files... INFO @ Tue, 02 Aug 2022 14:27:06: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 14:27:07: 5000000 INFO @ Tue, 02 Aug 2022 14:27:14: 1000000 INFO @ Tue, 02 Aug 2022 14:27:15: 6000000 INFO @ Tue, 02 Aug 2022 14:27:21: 2000000 INFO @ Tue, 02 Aug 2022 14:27:22: 7000000 INFO @ Tue, 02 Aug 2022 14:27:28: 3000000 INFO @ Tue, 02 Aug 2022 14:27:30: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 14:27:35: 4000000 INFO @ Tue, 02 Aug 2022 14:27:36: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 14:27:36: #1 read tag files... INFO @ Tue, 02 Aug 2022 14:27:36: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 14:27:37: 9000000 INFO @ Tue, 02 Aug 2022 14:27:42: 5000000 INFO @ Tue, 02 Aug 2022 14:27:43: 1000000 INFO @ Tue, 02 Aug 2022 14:27:45: 10000000 INFO @ Tue, 02 Aug 2022 14:27:50: 6000000 INFO @ Tue, 02 Aug 2022 14:27:50: 2000000 INFO @ Tue, 02 Aug 2022 14:27:52: 11000000 INFO @ Tue, 02 Aug 2022 14:27:57: 7000000 INFO @ Tue, 02 Aug 2022 14:27:57: 3000000 INFO @ Tue, 02 Aug 2022 14:28:00: 12000000 INFO @ Tue, 02 Aug 2022 14:28:04: 8000000 INFO @ Tue, 02 Aug 2022 14:28:05: 4000000 INFO @ Tue, 02 Aug 2022 14:28:07: 13000000 INFO @ Tue, 02 Aug 2022 14:28:12: 9000000 INFO @ Tue, 02 Aug 2022 14:28:12: 5000000 INFO @ Tue, 02 Aug 2022 14:28:14: 14000000 INFO @ Tue, 02 Aug 2022 14:28:19: 10000000 INFO @ Tue, 02 Aug 2022 14:28:20: 6000000 INFO @ Tue, 02 Aug 2022 14:28:22: 15000000 INFO @ Tue, 02 Aug 2022 14:28:27: 11000000 INFO @ Tue, 02 Aug 2022 14:28:27: 7000000 INFO @ Tue, 02 Aug 2022 14:28:29: 16000000 INFO @ Tue, 02 Aug 2022 14:28:34: 12000000 INFO @ Tue, 02 Aug 2022 14:28:35: 8000000 INFO @ Tue, 02 Aug 2022 14:28:36: 17000000 INFO @ Tue, 02 Aug 2022 14:28:42: 13000000 INFO @ Tue, 02 Aug 2022 14:28:42: 9000000 INFO @ Tue, 02 Aug 2022 14:28:43: 18000000 INFO @ Tue, 02 Aug 2022 14:28:49: 14000000 INFO @ Tue, 02 Aug 2022 14:28:50: 10000000 INFO @ Tue, 02 Aug 2022 14:28:51: 19000000 INFO @ Tue, 02 Aug 2022 14:28:57: 15000000 INFO @ Tue, 02 Aug 2022 14:28:58: 11000000 INFO @ Tue, 02 Aug 2022 14:28:58: 20000000 INFO @ Tue, 02 Aug 2022 14:29:05: 16000000 INFO @ Tue, 02 Aug 2022 14:29:05: 21000000 INFO @ Tue, 02 Aug 2022 14:29:05: 12000000 INFO @ Tue, 02 Aug 2022 14:29:12: 17000000 INFO @ Tue, 02 Aug 2022 14:29:13: 22000000 INFO @ Tue, 02 Aug 2022 14:29:13: 13000000 INFO @ Tue, 02 Aug 2022 14:29:20: 23000000 INFO @ Tue, 02 Aug 2022 14:29:20: 18000000 INFO @ Tue, 02 Aug 2022 14:29:21: 14000000 INFO @ Tue, 02 Aug 2022 14:29:27: 24000000 INFO @ Tue, 02 Aug 2022 14:29:28: 19000000 INFO @ Tue, 02 Aug 2022 14:29:28: 15000000 INFO @ Tue, 02 Aug 2022 14:29:34: 25000000 INFO @ Tue, 02 Aug 2022 14:29:35: 20000000 INFO @ Tue, 02 Aug 2022 14:29:36: 16000000 INFO @ Tue, 02 Aug 2022 14:29:41: 26000000 INFO @ Tue, 02 Aug 2022 14:29:43: 21000000 INFO @ Tue, 02 Aug 2022 14:29:43: 17000000 INFO @ Tue, 02 Aug 2022 14:29:48: 27000000 INFO @ Tue, 02 Aug 2022 14:29:50: 22000000 INFO @ Tue, 02 Aug 2022 14:29:51: 18000000 INFO @ Tue, 02 Aug 2022 14:29:55: 28000000 INFO @ Tue, 02 Aug 2022 14:29:58: 23000000 INFO @ Tue, 02 Aug 2022 14:29:58: 19000000 INFO @ Tue, 02 Aug 2022 14:30:02: 29000000 INFO @ Tue, 02 Aug 2022 14:30:05: 24000000 INFO @ Tue, 02 Aug 2022 14:30:06: 20000000 INFO @ Tue, 02 Aug 2022 14:30:09: 30000000 INFO @ Tue, 02 Aug 2022 14:30:13: 25000000 INFO @ Tue, 02 Aug 2022 14:30:13: 21000000 INFO @ Tue, 02 Aug 2022 14:30:16: 31000000 INFO @ Tue, 02 Aug 2022 14:30:20: 26000000 INFO @ Tue, 02 Aug 2022 14:30:21: 22000000 INFO @ Tue, 02 Aug 2022 14:30:24: 32000000 INFO @ Tue, 02 Aug 2022 14:30:27: 27000000 INFO @ Tue, 02 Aug 2022 14:30:28: 23000000 INFO @ Tue, 02 Aug 2022 14:30:31: 33000000 INFO @ Tue, 02 Aug 2022 14:30:34: 28000000 INFO @ Tue, 02 Aug 2022 14:30:35: 24000000 INFO @ Tue, 02 Aug 2022 14:30:38: 34000000 INFO @ Tue, 02 Aug 2022 14:30:41: 29000000 INFO @ Tue, 02 Aug 2022 14:30:43: 25000000 INFO @ Tue, 02 Aug 2022 14:30:45: 35000000 INFO @ Tue, 02 Aug 2022 14:30:47: 30000000 INFO @ Tue, 02 Aug 2022 14:30:50: 26000000 INFO @ Tue, 02 Aug 2022 14:30:53: 36000000 INFO @ Tue, 02 Aug 2022 14:30:54: 31000000 INFO @ Tue, 02 Aug 2022 14:30:57: 27000000 INFO @ Tue, 02 Aug 2022 14:31:00: 37000000 INFO @ Tue, 02 Aug 2022 14:31:01: 32000000 INFO @ Tue, 02 Aug 2022 14:31:04: 28000000 INFO @ Tue, 02 Aug 2022 14:31:07: 38000000 INFO @ Tue, 02 Aug 2022 14:31:08: 33000000 INFO @ Tue, 02 Aug 2022 14:31:11: 29000000 INFO @ Tue, 02 Aug 2022 14:31:14: 39000000 INFO @ Tue, 02 Aug 2022 14:31:15: 34000000 INFO @ Tue, 02 Aug 2022 14:31:18: 30000000 INFO @ Tue, 02 Aug 2022 14:31:21: 40000000 INFO @ Tue, 02 Aug 2022 14:31:22: 35000000 INFO @ Tue, 02 Aug 2022 14:31:25: 31000000 INFO @ Tue, 02 Aug 2022 14:31:29: 41000000 INFO @ Tue, 02 Aug 2022 14:31:29: 36000000 INFO @ Tue, 02 Aug 2022 14:31:32: 32000000 INFO @ Tue, 02 Aug 2022 14:31:36: 42000000 INFO @ Tue, 02 Aug 2022 14:31:36: 37000000 INFO @ Tue, 02 Aug 2022 14:31:39: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 14:31:43: 43000000 INFO @ Tue, 02 Aug 2022 14:31:43: 38000000 INFO @ Tue, 02 Aug 2022 14:31:46: 34000000 INFO @ Tue, 02 Aug 2022 14:31:50: 44000000 INFO @ Tue, 02 Aug 2022 14:31:50: 39000000 INFO @ Tue, 02 Aug 2022 14:31:53: 35000000 INFO @ Tue, 02 Aug 2022 14:31:57: 40000000 INFO @ Tue, 02 Aug 2022 14:31:57: 45000000 INFO @ Tue, 02 Aug 2022 14:32:00: 36000000 INFO @ Tue, 02 Aug 2022 14:32:04: 41000000 INFO @ Tue, 02 Aug 2022 14:32:04: 46000000 INFO @ Tue, 02 Aug 2022 14:32:07: 37000000 INFO @ Tue, 02 Aug 2022 14:32:10: 42000000 INFO @ Tue, 02 Aug 2022 14:32:11: 47000000 INFO @ Tue, 02 Aug 2022 14:32:14: 38000000 INFO @ Tue, 02 Aug 2022 14:32:17: 43000000 INFO @ Tue, 02 Aug 2022 14:32:18: 48000000 INFO @ Tue, 02 Aug 2022 14:32:21: 39000000 INFO @ Tue, 02 Aug 2022 14:32:24: 44000000 INFO @ Tue, 02 Aug 2022 14:32:25: 49000000 INFO @ Tue, 02 Aug 2022 14:32:28: 40000000 INFO @ Tue, 02 Aug 2022 14:32:30: 45000000 INFO @ Tue, 02 Aug 2022 14:32:32: 50000000 INFO @ Tue, 02 Aug 2022 14:32:35: 41000000 INFO @ Tue, 02 Aug 2022 14:32:37: 46000000 INFO @ Tue, 02 Aug 2022 14:32:39: 51000000 INFO @ Tue, 02 Aug 2022 14:32:42: 42000000 INFO @ Tue, 02 Aug 2022 14:32:44: 47000000 INFO @ Tue, 02 Aug 2022 14:32:46: 52000000 INFO @ Tue, 02 Aug 2022 14:32:49: 43000000 INFO @ Tue, 02 Aug 2022 14:32:50: 48000000 INFO @ Tue, 02 Aug 2022 14:32:53: 53000000 INFO @ Tue, 02 Aug 2022 14:32:56: 44000000 INFO @ Tue, 02 Aug 2022 14:32:57: 49000000 INFO @ Tue, 02 Aug 2022 14:33:00: 54000000 INFO @ Tue, 02 Aug 2022 14:33:03: 45000000 INFO @ Tue, 02 Aug 2022 14:33:04: 50000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 14:33:07: 55000000 INFO @ Tue, 02 Aug 2022 14:33:10: 46000000 INFO @ Tue, 02 Aug 2022 14:33:11: 51000000 INFO @ Tue, 02 Aug 2022 14:33:14: 56000000 INFO @ Tue, 02 Aug 2022 14:33:17: 47000000 INFO @ Tue, 02 Aug 2022 14:33:18: 52000000 INFO @ Tue, 02 Aug 2022 14:33:21: 57000000 INFO @ Tue, 02 Aug 2022 14:33:24: 48000000 INFO @ Tue, 02 Aug 2022 14:33:24: 53000000 INFO @ Tue, 02 Aug 2022 14:33:28: 58000000 INFO @ Tue, 02 Aug 2022 14:33:31: 49000000 INFO @ Tue, 02 Aug 2022 14:33:31: 54000000 INFO @ Tue, 02 Aug 2022 14:33:35: 59000000 INFO @ Tue, 02 Aug 2022 14:33:38: 50000000 INFO @ Tue, 02 Aug 2022 14:33:38: 55000000 INFO @ Tue, 02 Aug 2022 14:33:42: 60000000 INFO @ Tue, 02 Aug 2022 14:33:45: 51000000 INFO @ Tue, 02 Aug 2022 14:33:45: 56000000 INFO @ Tue, 02 Aug 2022 14:33:49: 61000000 INFO @ Tue, 02 Aug 2022 14:33:52: 52000000 INFO @ Tue, 02 Aug 2022 14:33:52: 57000000 INFO @ Tue, 02 Aug 2022 14:33:56: 62000000 INFO @ Tue, 02 Aug 2022 14:33:59: 53000000 INFO @ Tue, 02 Aug 2022 14:33:59: 58000000 INFO @ Tue, 02 Aug 2022 14:34:03: 63000000 INFO @ Tue, 02 Aug 2022 14:34:06: 54000000 INFO @ Tue, 02 Aug 2022 14:34:06: 59000000 INFO @ Tue, 02 Aug 2022 14:34:10: 64000000 INFO @ Tue, 02 Aug 2022 14:34:13: 55000000 INFO @ Tue, 02 Aug 2022 14:34:13: 60000000 INFO @ Tue, 02 Aug 2022 14:34:17: 65000000 INFO @ Tue, 02 Aug 2022 14:34:20: 56000000 INFO @ Tue, 02 Aug 2022 14:34:20: 61000000 INFO @ Tue, 02 Aug 2022 14:34:24: 66000000 INFO @ Tue, 02 Aug 2022 14:34:27: 57000000 INFO @ Tue, 02 Aug 2022 14:34:27: 62000000 INFO @ Tue, 02 Aug 2022 14:34:32: 67000000 INFO @ Tue, 02 Aug 2022 14:34:34: 58000000 INFO @ Tue, 02 Aug 2022 14:34:35: 63000000 INFO @ Tue, 02 Aug 2022 14:34:39: 68000000 INFO @ Tue, 02 Aug 2022 14:34:42: 59000000 INFO @ Tue, 02 Aug 2022 14:34:42: 64000000 INFO @ Tue, 02 Aug 2022 14:34:46: 69000000 INFO @ Tue, 02 Aug 2022 14:34:49: 65000000 INFO @ Tue, 02 Aug 2022 14:34:49: 60000000 INFO @ Tue, 02 Aug 2022 14:34:53: 70000000 INFO @ Tue, 02 Aug 2022 14:34:56: 66000000 INFO @ Tue, 02 Aug 2022 14:34:56: 61000000 INFO @ Tue, 02 Aug 2022 14:34:58: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 14:34:58: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 14:34:58: #1 total tags in treatment: 27244410 INFO @ Tue, 02 Aug 2022 14:34:58: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 14:34:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 14:34:58: #1 tags after filtering in treatment: 19196366 INFO @ Tue, 02 Aug 2022 14:34:58: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 02 Aug 2022 14:34:58: #1 finished! INFO @ Tue, 02 Aug 2022 14:34:58: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 14:34:58: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 14:35:00: #2 number of paired peaks: 59 WARNING @ Tue, 02 Aug 2022 14:35:00: Too few paired peaks (59) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 14:35:00: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 14:35:02: 67000000 INFO @ Tue, 02 Aug 2022 14:35:03: 62000000 INFO @ Tue, 02 Aug 2022 14:35:09: 68000000 INFO @ Tue, 02 Aug 2022 14:35:09: 63000000 INFO @ Tue, 02 Aug 2022 14:35:15: 69000000 INFO @ Tue, 02 Aug 2022 14:35:15: 64000000 INFO @ Tue, 02 Aug 2022 14:35:21: 70000000 INFO @ Tue, 02 Aug 2022 14:35:21: 65000000 INFO @ Tue, 02 Aug 2022 14:35:25: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 14:35:25: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 14:35:25: #1 total tags in treatment: 27244410 INFO @ Tue, 02 Aug 2022 14:35:25: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 14:35:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 14:35:26: #1 tags after filtering in treatment: 19196366 INFO @ Tue, 02 Aug 2022 14:35:26: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 02 Aug 2022 14:35:26: #1 finished! INFO @ Tue, 02 Aug 2022 14:35:26: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 14:35:26: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 14:35:27: #2 number of paired peaks: 59 WARNING @ Tue, 02 Aug 2022 14:35:27: Too few paired peaks (59) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 14:35:27: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 14:35:28: 66000000 INFO @ Tue, 02 Aug 2022 14:35:33: 67000000 INFO @ Tue, 02 Aug 2022 14:35:39: 68000000 INFO @ Tue, 02 Aug 2022 14:35:45: 69000000 INFO @ Tue, 02 Aug 2022 14:35:51: 70000000 INFO @ Tue, 02 Aug 2022 14:35:55: #1 tag size is determined as 51 bps INFO @ Tue, 02 Aug 2022 14:35:55: #1 tag size = 51 INFO @ Tue, 02 Aug 2022 14:35:55: #1 total tags in treatment: 27244410 INFO @ Tue, 02 Aug 2022 14:35:55: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 14:35:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 14:35:56: #1 tags after filtering in treatment: 19196366 INFO @ Tue, 02 Aug 2022 14:35:56: #1 Redundant rate of treatment: 0.30 INFO @ Tue, 02 Aug 2022 14:35:56: #1 finished! INFO @ Tue, 02 Aug 2022 14:35:56: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 14:35:56: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 14:35:57: #2 number of paired peaks: 59 WARNING @ Tue, 02 Aug 2022 14:35:57: Too few paired peaks (59) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 02 Aug 2022 14:35:57: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/dm3/SRX14339043/SRX14339043.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling