Job ID = 6497789 SRX = SRX1389387 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-06-25T22:26:35 prefetch.2.10.7: 1) Downloading 'SRR2834295'... 2020-06-25T22:26:35 prefetch.2.10.7: Downloading via HTTPS... 2020-06-25T22:29:37 prefetch.2.10.7: HTTPS download succeed 2020-06-25T22:29:37 prefetch.2.10.7: 1) 'SRR2834295' was downloaded successfully Read 16000000 spots for SRR2834295/SRR2834295.sra Written 16000000 spots for SRR2834295/SRR2834295.sra 2020-06-25T22:31:19 prefetch.2.10.7: 1) Downloading 'SRR2834296'... 2020-06-25T22:31:19 prefetch.2.10.7: Downloading via HTTPS... 2020-06-25T22:34:50 prefetch.2.10.7: HTTPS download succeed 2020-06-25T22:34:50 prefetch.2.10.7: 1) 'SRR2834296' was downloaded successfully Read 13957776 spots for SRR2834296/SRR2834296.sra Written 13957776 spots for SRR2834296/SRR2834296.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:17:48 29957776 reads; of these: 29957776 (100.00%) were paired; of these: 1586965 (5.30%) aligned concordantly 0 times 18260438 (60.95%) aligned concordantly exactly 1 time 10110373 (33.75%) aligned concordantly >1 times ---- 1586965 pairs aligned concordantly 0 times; of these: 122655 (7.73%) aligned discordantly 1 time ---- 1464310 pairs aligned 0 times concordantly or discordantly; of these: 2928620 mates make up the pairs; of these: 1536308 (52.46%) aligned 0 times 750466 (25.63%) aligned exactly 1 time 641846 (21.92%) aligned >1 times 97.44% overall alignment rate Time searching: 01:17:48 Overall time: 01:17:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 7733795 / 28369701 = 0.2726 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 09:10:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 09:10:42: #1 read tag files... INFO @ Fri, 26 Jun 2020 09:10:42: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 09:10:49: 1000000 INFO @ Fri, 26 Jun 2020 09:10:57: 2000000 INFO @ Fri, 26 Jun 2020 09:11:04: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 09:11:12: 4000000 INFO @ Fri, 26 Jun 2020 09:11:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 09:11:13: #1 read tag files... INFO @ Fri, 26 Jun 2020 09:11:13: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 09:11:20: 5000000 INFO @ Fri, 26 Jun 2020 09:11:21: 1000000 INFO @ Fri, 26 Jun 2020 09:11:28: 6000000 INFO @ Fri, 26 Jun 2020 09:11:29: 2000000 INFO @ Fri, 26 Jun 2020 09:11:36: 7000000 INFO @ Fri, 26 Jun 2020 09:11:37: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 26 Jun 2020 09:11:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 26 Jun 2020 09:11:42: #1 read tag files... INFO @ Fri, 26 Jun 2020 09:11:42: #1 read treatment tags... INFO @ Fri, 26 Jun 2020 09:11:44: 8000000 INFO @ Fri, 26 Jun 2020 09:11:45: 4000000 INFO @ Fri, 26 Jun 2020 09:11:50: 1000000 INFO @ Fri, 26 Jun 2020 09:11:52: 9000000 INFO @ Fri, 26 Jun 2020 09:11:53: 5000000 INFO @ Fri, 26 Jun 2020 09:11:59: 2000000 INFO @ Fri, 26 Jun 2020 09:12:01: 10000000 INFO @ Fri, 26 Jun 2020 09:12:01: 6000000 INFO @ Fri, 26 Jun 2020 09:12:07: 3000000 INFO @ Fri, 26 Jun 2020 09:12:09: 11000000 INFO @ Fri, 26 Jun 2020 09:12:09: 7000000 INFO @ Fri, 26 Jun 2020 09:12:15: 4000000 INFO @ Fri, 26 Jun 2020 09:12:17: 8000000 INFO @ Fri, 26 Jun 2020 09:12:18: 12000000 INFO @ Fri, 26 Jun 2020 09:12:24: 5000000 INFO @ Fri, 26 Jun 2020 09:12:26: 9000000 INFO @ Fri, 26 Jun 2020 09:12:26: 13000000 INFO @ Fri, 26 Jun 2020 09:12:32: 6000000 INFO @ Fri, 26 Jun 2020 09:12:34: 10000000 INFO @ Fri, 26 Jun 2020 09:12:34: 14000000 INFO @ Fri, 26 Jun 2020 09:12:40: 7000000 INFO @ Fri, 26 Jun 2020 09:12:42: 11000000 INFO @ Fri, 26 Jun 2020 09:12:42: 15000000 INFO @ Fri, 26 Jun 2020 09:12:48: 8000000 INFO @ Fri, 26 Jun 2020 09:12:50: 12000000 INFO @ Fri, 26 Jun 2020 09:12:50: 16000000 INFO @ Fri, 26 Jun 2020 09:12:57: 9000000 INFO @ Fri, 26 Jun 2020 09:12:58: 13000000 INFO @ Fri, 26 Jun 2020 09:12:59: 17000000 INFO @ Fri, 26 Jun 2020 09:13:05: 10000000 INFO @ Fri, 26 Jun 2020 09:13:06: 14000000 INFO @ Fri, 26 Jun 2020 09:13:07: 18000000 INFO @ Fri, 26 Jun 2020 09:13:13: 11000000 INFO @ Fri, 26 Jun 2020 09:13:15: 15000000 INFO @ Fri, 26 Jun 2020 09:13:15: 19000000 INFO @ Fri, 26 Jun 2020 09:13:22: 12000000 INFO @ Fri, 26 Jun 2020 09:13:23: 16000000 INFO @ Fri, 26 Jun 2020 09:13:24: 20000000 INFO @ Fri, 26 Jun 2020 09:13:30: 13000000 INFO @ Fri, 26 Jun 2020 09:13:31: 17000000 INFO @ Fri, 26 Jun 2020 09:13:32: 21000000 INFO @ Fri, 26 Jun 2020 09:13:38: 14000000 INFO @ Fri, 26 Jun 2020 09:13:39: 18000000 INFO @ Fri, 26 Jun 2020 09:13:41: 22000000 INFO @ Fri, 26 Jun 2020 09:13:46: 15000000 INFO @ Fri, 26 Jun 2020 09:13:47: 19000000 INFO @ Fri, 26 Jun 2020 09:13:49: 23000000 INFO @ Fri, 26 Jun 2020 09:13:55: 16000000 INFO @ Fri, 26 Jun 2020 09:13:56: 20000000 INFO @ Fri, 26 Jun 2020 09:13:58: 24000000 INFO @ Fri, 26 Jun 2020 09:14:03: 17000000 INFO @ Fri, 26 Jun 2020 09:14:04: 21000000 INFO @ Fri, 26 Jun 2020 09:14:06: 25000000 INFO @ Fri, 26 Jun 2020 09:14:11: 18000000 INFO @ Fri, 26 Jun 2020 09:14:12: 22000000 INFO @ Fri, 26 Jun 2020 09:14:14: 26000000 INFO @ Fri, 26 Jun 2020 09:14:19: 19000000 INFO @ Fri, 26 Jun 2020 09:14:20: 23000000 INFO @ Fri, 26 Jun 2020 09:14:22: 27000000 INFO @ Fri, 26 Jun 2020 09:14:28: 20000000 INFO @ Fri, 26 Jun 2020 09:14:29: 24000000 INFO @ Fri, 26 Jun 2020 09:14:30: 28000000 INFO @ Fri, 26 Jun 2020 09:14:36: 21000000 INFO @ Fri, 26 Jun 2020 09:14:37: 25000000 INFO @ Fri, 26 Jun 2020 09:14:38: 29000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 26 Jun 2020 09:14:45: 22000000 INFO @ Fri, 26 Jun 2020 09:14:45: 26000000 INFO @ Fri, 26 Jun 2020 09:14:46: 30000000 INFO @ Fri, 26 Jun 2020 09:14:53: 27000000 INFO @ Fri, 26 Jun 2020 09:14:53: 23000000 INFO @ Fri, 26 Jun 2020 09:14:54: 31000000 INFO @ Fri, 26 Jun 2020 09:15:00: 28000000 INFO @ Fri, 26 Jun 2020 09:15:01: 24000000 INFO @ Fri, 26 Jun 2020 09:15:02: 32000000 INFO @ Fri, 26 Jun 2020 09:15:08: 29000000 INFO @ Fri, 26 Jun 2020 09:15:09: 25000000 INFO @ Fri, 26 Jun 2020 09:15:10: 33000000 INFO @ Fri, 26 Jun 2020 09:15:16: 30000000 INFO @ Fri, 26 Jun 2020 09:15:17: 26000000 INFO @ Fri, 26 Jun 2020 09:15:18: 34000000 INFO @ Fri, 26 Jun 2020 09:15:24: 31000000 INFO @ Fri, 26 Jun 2020 09:15:25: 27000000 INFO @ Fri, 26 Jun 2020 09:15:26: 35000000 INFO @ Fri, 26 Jun 2020 09:15:32: 32000000 INFO @ Fri, 26 Jun 2020 09:15:33: 28000000 INFO @ Fri, 26 Jun 2020 09:15:34: 36000000 INFO @ Fri, 26 Jun 2020 09:15:40: 33000000 INFO @ Fri, 26 Jun 2020 09:15:41: 29000000 INFO @ Fri, 26 Jun 2020 09:15:41: 37000000 INFO @ Fri, 26 Jun 2020 09:15:48: 34000000 INFO @ Fri, 26 Jun 2020 09:15:49: 30000000 INFO @ Fri, 26 Jun 2020 09:15:49: 38000000 BigWig に変換しました。 INFO @ Fri, 26 Jun 2020 09:15:56: 35000000 INFO @ Fri, 26 Jun 2020 09:15:57: 39000000 INFO @ Fri, 26 Jun 2020 09:15:57: 31000000 INFO @ Fri, 26 Jun 2020 09:16:04: 36000000 INFO @ Fri, 26 Jun 2020 09:16:05: 40000000 INFO @ Fri, 26 Jun 2020 09:16:05: 32000000 INFO @ Fri, 26 Jun 2020 09:16:11: 37000000 INFO @ Fri, 26 Jun 2020 09:16:12: 41000000 INFO @ Fri, 26 Jun 2020 09:16:13: 33000000 INFO @ Fri, 26 Jun 2020 09:16:19: 38000000 INFO @ Fri, 26 Jun 2020 09:16:21: 34000000 INFO @ Fri, 26 Jun 2020 09:16:21: 42000000 INFO @ Fri, 26 Jun 2020 09:16:27: 39000000 INFO @ Fri, 26 Jun 2020 09:16:29: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 09:16:29: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 09:16:29: #1 total tags in treatment: 20640923 INFO @ Fri, 26 Jun 2020 09:16:29: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 09:16:29: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 09:16:29: 35000000 INFO @ Fri, 26 Jun 2020 09:16:29: #1 tags after filtering in treatment: 15012424 INFO @ Fri, 26 Jun 2020 09:16:29: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 26 Jun 2020 09:16:29: #1 finished! INFO @ Fri, 26 Jun 2020 09:16:29: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 09:16:29: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 09:16:30: #2 number of paired peaks: 155 WARNING @ Fri, 26 Jun 2020 09:16:30: Fewer paired peaks (155) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 155 pairs to build model! INFO @ Fri, 26 Jun 2020 09:16:30: start model_add_line... INFO @ Fri, 26 Jun 2020 09:16:30: start X-correlation... INFO @ Fri, 26 Jun 2020 09:16:30: end of X-cor INFO @ Fri, 26 Jun 2020 09:16:30: #2 finished! INFO @ Fri, 26 Jun 2020 09:16:30: #2 predicted fragment length is 109 bps INFO @ Fri, 26 Jun 2020 09:16:30: #2 alternative fragment length(s) may be 109 bps INFO @ Fri, 26 Jun 2020 09:16:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05_model.r INFO @ Fri, 26 Jun 2020 09:16:30: #3 Call peaks... INFO @ Fri, 26 Jun 2020 09:16:31: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 09:16:34: 40000000 INFO @ Fri, 26 Jun 2020 09:16:37: 36000000 INFO @ Fri, 26 Jun 2020 09:16:42: 41000000 INFO @ Fri, 26 Jun 2020 09:16:44: 37000000 INFO @ Fri, 26 Jun 2020 09:16:50: 42000000 INFO @ Fri, 26 Jun 2020 09:16:52: 38000000 INFO @ Fri, 26 Jun 2020 09:16:58: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 09:16:58: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 09:16:58: #1 total tags in treatment: 20640923 INFO @ Fri, 26 Jun 2020 09:16:58: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 09:16:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 09:16:59: #1 tags after filtering in treatment: 15012424 INFO @ Fri, 26 Jun 2020 09:16:59: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 26 Jun 2020 09:16:59: #1 finished! INFO @ Fri, 26 Jun 2020 09:16:59: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 09:16:59: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 09:17:00: 39000000 INFO @ Fri, 26 Jun 2020 09:17:00: #2 number of paired peaks: 155 WARNING @ Fri, 26 Jun 2020 09:17:00: Fewer paired peaks (155) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 155 pairs to build model! INFO @ Fri, 26 Jun 2020 09:17:00: start model_add_line... INFO @ Fri, 26 Jun 2020 09:17:00: start X-correlation... INFO @ Fri, 26 Jun 2020 09:17:00: end of X-cor INFO @ Fri, 26 Jun 2020 09:17:00: #2 finished! INFO @ Fri, 26 Jun 2020 09:17:00: #2 predicted fragment length is 109 bps INFO @ Fri, 26 Jun 2020 09:17:00: #2 alternative fragment length(s) may be 109 bps INFO @ Fri, 26 Jun 2020 09:17:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10_model.r INFO @ Fri, 26 Jun 2020 09:17:00: #3 Call peaks... INFO @ Fri, 26 Jun 2020 09:17:00: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 09:17:05: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 09:17:07: 40000000 INFO @ Fri, 26 Jun 2020 09:17:14: 41000000 INFO @ Fri, 26 Jun 2020 09:17:22: 42000000 INFO @ Fri, 26 Jun 2020 09:17:23: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05_peaks.xls INFO @ Fri, 26 Jun 2020 09:17:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 09:17:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.05_summits.bed INFO @ Fri, 26 Jun 2020 09:17:23: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (2528 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 09:17:29: #1 tag size is determined as 51 bps INFO @ Fri, 26 Jun 2020 09:17:29: #1 tag size = 51 INFO @ Fri, 26 Jun 2020 09:17:29: #1 total tags in treatment: 20640923 INFO @ Fri, 26 Jun 2020 09:17:29: #1 user defined the maximum tags... INFO @ Fri, 26 Jun 2020 09:17:29: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 26 Jun 2020 09:17:29: #1 tags after filtering in treatment: 15012424 INFO @ Fri, 26 Jun 2020 09:17:29: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 26 Jun 2020 09:17:29: #1 finished! INFO @ Fri, 26 Jun 2020 09:17:29: #2 Build Peak Model... INFO @ Fri, 26 Jun 2020 09:17:29: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 26 Jun 2020 09:17:31: #2 number of paired peaks: 155 WARNING @ Fri, 26 Jun 2020 09:17:31: Fewer paired peaks (155) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 155 pairs to build model! INFO @ Fri, 26 Jun 2020 09:17:31: start model_add_line... INFO @ Fri, 26 Jun 2020 09:17:31: start X-correlation... INFO @ Fri, 26 Jun 2020 09:17:31: end of X-cor INFO @ Fri, 26 Jun 2020 09:17:31: #2 finished! INFO @ Fri, 26 Jun 2020 09:17:31: #2 predicted fragment length is 109 bps INFO @ Fri, 26 Jun 2020 09:17:31: #2 alternative fragment length(s) may be 109 bps INFO @ Fri, 26 Jun 2020 09:17:31: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20_model.r INFO @ Fri, 26 Jun 2020 09:17:31: #3 Call peaks... INFO @ Fri, 26 Jun 2020 09:17:31: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 26 Jun 2020 09:17:34: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 09:17:53: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10_peaks.xls INFO @ Fri, 26 Jun 2020 09:17:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 09:17:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.10_summits.bed INFO @ Fri, 26 Jun 2020 09:17:53: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (1290 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Fri, 26 Jun 2020 09:18:07: #3 Call peaks for each chromosome... INFO @ Fri, 26 Jun 2020 09:18:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20_peaks.xls INFO @ Fri, 26 Jun 2020 09:18:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20_peaks.narrowPeak INFO @ Fri, 26 Jun 2020 09:18:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1389387/SRX1389387.20_summits.bed INFO @ Fri, 26 Jun 2020 09:18:25: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (741 records, 4 fields): 2 millis CompletedMACS2peakCalling