Job ID = 16436215 SRX = SRX12178862 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T02:06:58 prefetch.2.10.7: 1) Downloading 'SRR15888052'... 2022-08-02T02:06:58 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T02:08:21 prefetch.2.10.7: HTTPS download succeed 2022-08-02T02:08:21 prefetch.2.10.7: 1) 'SRR15888052' was downloaded successfully 2022-08-02T02:08:21 prefetch.2.10.7: 'SRR15888052' has 0 unresolved dependencies Read 28311918 spots for SRR15888052/SRR15888052.sra Written 28311918 spots for SRR15888052/SRR15888052.sra fastq に変換しました。 bowtie でマッピング中... Your job 16436812 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:34:37 28311918 reads; of these: 28311918 (100.00%) were paired; of these: 7509368 (26.52%) aligned concordantly 0 times 18145839 (64.09%) aligned concordantly exactly 1 time 2656711 (9.38%) aligned concordantly >1 times ---- 7509368 pairs aligned concordantly 0 times; of these: 2398477 (31.94%) aligned discordantly 1 time ---- 5110891 pairs aligned 0 times concordantly or discordantly; of these: 10221782 mates make up the pairs; of these: 6764859 (66.18%) aligned 0 times 2647010 (25.90%) aligned exactly 1 time 809913 (7.92%) aligned >1 times 88.05% overall alignment rate Time searching: 00:34:37 Overall time: 00:34:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3271107 / 23127425 = 0.1414 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 12:00:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 12:00:38: #1 read tag files... INFO @ Tue, 02 Aug 2022 12:00:38: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 12:00:44: 1000000 INFO @ Tue, 02 Aug 2022 12:00:50: 2000000 INFO @ Tue, 02 Aug 2022 12:00:56: 3000000 INFO @ Tue, 02 Aug 2022 12:01:02: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 12:01:07: 5000000 INFO @ Tue, 02 Aug 2022 12:01:08: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 12:01:08: #1 read tag files... INFO @ Tue, 02 Aug 2022 12:01:08: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 12:01:13: 6000000 INFO @ Tue, 02 Aug 2022 12:01:14: 1000000 INFO @ Tue, 02 Aug 2022 12:01:19: 7000000 INFO @ Tue, 02 Aug 2022 12:01:21: 2000000 INFO @ Tue, 02 Aug 2022 12:01:25: 8000000 INFO @ Tue, 02 Aug 2022 12:01:27: 3000000 INFO @ Tue, 02 Aug 2022 12:01:30: 9000000 INFO @ Tue, 02 Aug 2022 12:01:33: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 12:01:36: 10000000 INFO @ Tue, 02 Aug 2022 12:01:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 12:01:38: #1 read tag files... INFO @ Tue, 02 Aug 2022 12:01:38: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 12:01:40: 5000000 INFO @ Tue, 02 Aug 2022 12:01:43: 11000000 INFO @ Tue, 02 Aug 2022 12:01:45: 1000000 INFO @ Tue, 02 Aug 2022 12:01:46: 6000000 INFO @ Tue, 02 Aug 2022 12:01:49: 12000000 INFO @ Tue, 02 Aug 2022 12:01:52: 2000000 INFO @ Tue, 02 Aug 2022 12:01:53: 7000000 INFO @ Tue, 02 Aug 2022 12:01:56: 13000000 INFO @ Tue, 02 Aug 2022 12:01:59: 3000000 INFO @ Tue, 02 Aug 2022 12:01:59: 8000000 INFO @ Tue, 02 Aug 2022 12:02:05: 14000000 INFO @ Tue, 02 Aug 2022 12:02:05: 9000000 INFO @ Tue, 02 Aug 2022 12:02:05: 4000000 INFO @ Tue, 02 Aug 2022 12:02:11: 10000000 INFO @ Tue, 02 Aug 2022 12:02:12: 5000000 INFO @ Tue, 02 Aug 2022 12:02:14: 15000000 INFO @ Tue, 02 Aug 2022 12:02:18: 6000000 INFO @ Tue, 02 Aug 2022 12:02:18: 11000000 INFO @ Tue, 02 Aug 2022 12:02:22: 16000000 INFO @ Tue, 02 Aug 2022 12:02:24: 7000000 INFO @ Tue, 02 Aug 2022 12:02:24: 12000000 INFO @ Tue, 02 Aug 2022 12:02:28: 17000000 INFO @ Tue, 02 Aug 2022 12:02:31: 8000000 INFO @ Tue, 02 Aug 2022 12:02:31: 13000000 INFO @ Tue, 02 Aug 2022 12:02:35: 18000000 INFO @ Tue, 02 Aug 2022 12:02:38: 14000000 INFO @ Tue, 02 Aug 2022 12:02:39: 9000000 INFO @ Tue, 02 Aug 2022 12:02:42: 19000000 INFO @ Tue, 02 Aug 2022 12:02:44: 15000000 INFO @ Tue, 02 Aug 2022 12:02:45: 10000000 INFO @ Tue, 02 Aug 2022 12:02:49: 20000000 INFO @ Tue, 02 Aug 2022 12:02:51: 16000000 INFO @ Tue, 02 Aug 2022 12:02:52: 11000000 INFO @ Tue, 02 Aug 2022 12:02:55: 21000000 INFO @ Tue, 02 Aug 2022 12:02:58: 17000000 INFO @ Tue, 02 Aug 2022 12:02:58: 12000000 INFO @ Tue, 02 Aug 2022 12:03:02: 22000000 INFO @ Tue, 02 Aug 2022 12:03:04: 18000000 INFO @ Tue, 02 Aug 2022 12:03:05: 13000000 INFO @ Tue, 02 Aug 2022 12:03:09: 23000000 INFO @ Tue, 02 Aug 2022 12:03:11: 19000000 INFO @ Tue, 02 Aug 2022 12:03:12: 14000000 INFO @ Tue, 02 Aug 2022 12:03:17: 24000000 INFO @ Tue, 02 Aug 2022 12:03:18: 20000000 INFO @ Tue, 02 Aug 2022 12:03:19: 15000000 INFO @ Tue, 02 Aug 2022 12:03:24: 25000000 INFO @ Tue, 02 Aug 2022 12:03:24: 21000000 INFO @ Tue, 02 Aug 2022 12:03:26: 16000000 INFO @ Tue, 02 Aug 2022 12:03:31: 22000000 INFO @ Tue, 02 Aug 2022 12:03:31: 26000000 INFO @ Tue, 02 Aug 2022 12:03:33: 17000000 INFO @ Tue, 02 Aug 2022 12:03:37: 23000000 INFO @ Tue, 02 Aug 2022 12:03:38: 27000000 INFO @ Tue, 02 Aug 2022 12:03:39: 18000000 INFO @ Tue, 02 Aug 2022 12:03:44: 24000000 INFO @ Tue, 02 Aug 2022 12:03:44: 28000000 INFO @ Tue, 02 Aug 2022 12:03:46: 19000000 INFO @ Tue, 02 Aug 2022 12:03:50: 25000000 INFO @ Tue, 02 Aug 2022 12:03:51: 29000000 INFO @ Tue, 02 Aug 2022 12:03:52: 20000000 INFO @ Tue, 02 Aug 2022 12:03:56: 26000000 INFO @ Tue, 02 Aug 2022 12:03:58: 30000000 INFO @ Tue, 02 Aug 2022 12:03:58: 21000000 INFO @ Tue, 02 Aug 2022 12:04:03: 27000000 INFO @ Tue, 02 Aug 2022 12:04:05: 22000000 INFO @ Tue, 02 Aug 2022 12:04:05: 31000000 INFO @ Tue, 02 Aug 2022 12:04:09: 28000000 INFO @ Tue, 02 Aug 2022 12:04:11: 23000000 INFO @ Tue, 02 Aug 2022 12:04:12: 32000000 INFO @ Tue, 02 Aug 2022 12:04:16: 29000000 INFO @ Tue, 02 Aug 2022 12:04:18: 24000000 INFO @ Tue, 02 Aug 2022 12:04:20: 33000000 INFO @ Tue, 02 Aug 2022 12:04:22: 30000000 INFO @ Tue, 02 Aug 2022 12:04:24: 25000000 INFO @ Tue, 02 Aug 2022 12:04:27: 34000000 INFO @ Tue, 02 Aug 2022 12:04:29: 31000000 INFO @ Tue, 02 Aug 2022 12:04:30: 26000000 INFO @ Tue, 02 Aug 2022 12:04:33: 35000000 INFO @ Tue, 02 Aug 2022 12:04:35: 32000000 INFO @ Tue, 02 Aug 2022 12:04:37: 27000000 INFO @ Tue, 02 Aug 2022 12:04:40: 36000000 INFO @ Tue, 02 Aug 2022 12:04:41: 33000000 INFO @ Tue, 02 Aug 2022 12:04:43: 28000000 INFO @ Tue, 02 Aug 2022 12:04:47: 37000000 INFO @ Tue, 02 Aug 2022 12:04:47: 34000000 INFO @ Tue, 02 Aug 2022 12:04:49: 29000000 INFO @ Tue, 02 Aug 2022 12:04:54: 38000000 INFO @ Tue, 02 Aug 2022 12:04:54: 35000000 INFO @ Tue, 02 Aug 2022 12:04:56: 30000000 INFO @ Tue, 02 Aug 2022 12:05:00: 36000000 INFO @ Tue, 02 Aug 2022 12:05:01: 39000000 INFO @ Tue, 02 Aug 2022 12:05:03: 31000000 INFO @ Tue, 02 Aug 2022 12:05:07: 37000000 INFO @ Tue, 02 Aug 2022 12:05:08: 40000000 INFO @ Tue, 02 Aug 2022 12:05:09: 32000000 INFO @ Tue, 02 Aug 2022 12:05:13: 38000000 INFO @ Tue, 02 Aug 2022 12:05:15: 41000000 INFO @ Tue, 02 Aug 2022 12:05:15: 33000000 INFO @ Tue, 02 Aug 2022 12:05:19: 39000000 INFO @ Tue, 02 Aug 2022 12:05:21: 42000000 INFO @ Tue, 02 Aug 2022 12:05:22: 34000000 INFO @ Tue, 02 Aug 2022 12:05:25: 40000000 INFO @ Tue, 02 Aug 2022 12:05:28: 35000000 INFO @ Tue, 02 Aug 2022 12:05:28: 43000000 INFO @ Tue, 02 Aug 2022 12:05:30: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 12:05:30: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 12:05:30: #1 total tags in treatment: 17714554 INFO @ Tue, 02 Aug 2022 12:05:30: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 12:05:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 12:05:31: #1 tags after filtering in treatment: 11703429 INFO @ Tue, 02 Aug 2022 12:05:31: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 02 Aug 2022 12:05:31: #1 finished! INFO @ Tue, 02 Aug 2022 12:05:31: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 12:05:31: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 12:05:31: 41000000 INFO @ Tue, 02 Aug 2022 12:05:32: #2 number of paired peaks: 2671 INFO @ Tue, 02 Aug 2022 12:05:32: start model_add_line... INFO @ Tue, 02 Aug 2022 12:05:32: start X-correlation... INFO @ Tue, 02 Aug 2022 12:05:32: end of X-cor INFO @ Tue, 02 Aug 2022 12:05:32: #2 finished! INFO @ Tue, 02 Aug 2022 12:05:32: #2 predicted fragment length is 86 bps INFO @ Tue, 02 Aug 2022 12:05:32: #2 alternative fragment length(s) may be 86 bps INFO @ Tue, 02 Aug 2022 12:05:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05_model.r WARNING @ Tue, 02 Aug 2022 12:05:32: #2 Since the d (86) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 12:05:32: #2 You may need to consider one of the other alternative d(s): 86 WARNING @ Tue, 02 Aug 2022 12:05:32: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 12:05:32: #3 Call peaks... INFO @ Tue, 02 Aug 2022 12:05:32: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 12:05:33: 36000000 INFO @ Tue, 02 Aug 2022 12:05:36: 42000000 INFO @ Tue, 02 Aug 2022 12:05:38: 37000000 INFO @ Tue, 02 Aug 2022 12:05:41: 43000000 INFO @ Tue, 02 Aug 2022 12:05:43: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 12:05:43: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 12:05:43: #1 total tags in treatment: 17714554 INFO @ Tue, 02 Aug 2022 12:05:43: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 12:05:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 12:05:44: #1 tags after filtering in treatment: 11703429 INFO @ Tue, 02 Aug 2022 12:05:44: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 02 Aug 2022 12:05:44: #1 finished! INFO @ Tue, 02 Aug 2022 12:05:44: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 12:05:44: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 12:05:44: 38000000 INFO @ Tue, 02 Aug 2022 12:05:45: #2 number of paired peaks: 2671 INFO @ Tue, 02 Aug 2022 12:05:45: start model_add_line... INFO @ Tue, 02 Aug 2022 12:05:45: start X-correlation... INFO @ Tue, 02 Aug 2022 12:05:45: end of X-cor INFO @ Tue, 02 Aug 2022 12:05:45: #2 finished! INFO @ Tue, 02 Aug 2022 12:05:45: #2 predicted fragment length is 86 bps INFO @ Tue, 02 Aug 2022 12:05:45: #2 alternative fragment length(s) may be 86 bps INFO @ Tue, 02 Aug 2022 12:05:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10_model.r WARNING @ Tue, 02 Aug 2022 12:05:45: #2 Since the d (86) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 12:05:45: #2 You may need to consider one of the other alternative d(s): 86 WARNING @ Tue, 02 Aug 2022 12:05:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 12:05:45: #3 Call peaks... INFO @ Tue, 02 Aug 2022 12:05:45: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 12:05:48: 39000000 INFO @ Tue, 02 Aug 2022 12:05:53: 40000000 INFO @ Tue, 02 Aug 2022 12:05:56: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 12:05:58: 41000000 INFO @ Tue, 02 Aug 2022 12:06:02: 42000000 INFO @ Tue, 02 Aug 2022 12:06:07: 43000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 12:06:08: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 12:06:09: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05_peaks.xls INFO @ Tue, 02 Aug 2022 12:06:09: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 12:06:09: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.05_summits.bed INFO @ Tue, 02 Aug 2022 12:06:09: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 12:06:09: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 12:06:09: #1 total tags in treatment: 17714554 INFO @ Tue, 02 Aug 2022 12:06:09: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 12:06:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 12:06:09: Done! INFO @ Tue, 02 Aug 2022 12:06:09: #1 tags after filtering in treatment: 11703429 INFO @ Tue, 02 Aug 2022 12:06:09: #1 Redundant rate of treatment: 0.34 INFO @ Tue, 02 Aug 2022 12:06:09: #1 finished! INFO @ Tue, 02 Aug 2022 12:06:09: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 12:06:09: #2 looking for paired plus/minus strand peaks... pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (18538 records, 4 fields): 46 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 12:06:10: #2 number of paired peaks: 2671 INFO @ Tue, 02 Aug 2022 12:06:10: start model_add_line... INFO @ Tue, 02 Aug 2022 12:06:11: start X-correlation... INFO @ Tue, 02 Aug 2022 12:06:11: end of X-cor INFO @ Tue, 02 Aug 2022 12:06:11: #2 finished! INFO @ Tue, 02 Aug 2022 12:06:11: #2 predicted fragment length is 86 bps INFO @ Tue, 02 Aug 2022 12:06:11: #2 alternative fragment length(s) may be 86 bps INFO @ Tue, 02 Aug 2022 12:06:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20_model.r WARNING @ Tue, 02 Aug 2022 12:06:11: #2 Since the d (86) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 12:06:11: #2 You may need to consider one of the other alternative d(s): 86 WARNING @ Tue, 02 Aug 2022 12:06:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 12:06:11: #3 Call peaks... INFO @ Tue, 02 Aug 2022 12:06:11: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 12:06:21: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10_peaks.xls INFO @ Tue, 02 Aug 2022 12:06:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 12:06:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.10_summits.bed INFO @ Tue, 02 Aug 2022 12:06:21: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10753 records, 4 fields): 41 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 12:06:33: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 12:06:45: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20_peaks.xls INFO @ Tue, 02 Aug 2022 12:06:45: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 12:06:45: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178862/SRX12178862.20_summits.bed INFO @ Tue, 02 Aug 2022 12:06:45: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (2965 records, 4 fields): 23 millis CompletedMACS2peakCalling BigWig に変換しました。