Job ID = 16440110 SRX = SRX12178813 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T08:12:49 prefetch.2.10.7: 1) Downloading 'SRR15888101'... 2022-08-02T08:12:49 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T08:14:40 prefetch.2.10.7: HTTPS download succeed 2022-08-02T08:14:40 prefetch.2.10.7: 1) 'SRR15888101' was downloaded successfully 2022-08-02T08:14:40 prefetch.2.10.7: 'SRR15888101' has 0 unresolved dependencies Read 39586196 spots for SRR15888101/SRR15888101.sra Written 39586196 spots for SRR15888101/SRR15888101.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440950 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:50:31 39586196 reads; of these: 39586196 (100.00%) were paired; of these: 13388107 (33.82%) aligned concordantly 0 times 22015668 (55.61%) aligned concordantly exactly 1 time 4182421 (10.57%) aligned concordantly >1 times ---- 13388107 pairs aligned concordantly 0 times; of these: 4014817 (29.99%) aligned discordantly 1 time ---- 9373290 pairs aligned 0 times concordantly or discordantly; of these: 18746580 mates make up the pairs; of these: 14483585 (77.26%) aligned 0 times 3018776 (16.10%) aligned exactly 1 time 1244219 (6.64%) aligned >1 times 81.71% overall alignment rate Time searching: 00:50:32 Overall time: 00:50:32 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 10494461 / 30078122 = 0.3489 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:27:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:27:52: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:27:52: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:27:57: 1000000 INFO @ Tue, 02 Aug 2022 18:28:02: 2000000 INFO @ Tue, 02 Aug 2022 18:28:07: 3000000 INFO @ Tue, 02 Aug 2022 18:28:12: 4000000 INFO @ Tue, 02 Aug 2022 18:28:17: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:28:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:28:21: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:28:21: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:28:23: 6000000 INFO @ Tue, 02 Aug 2022 18:28:25: 1000000 INFO @ Tue, 02 Aug 2022 18:28:28: 7000000 INFO @ Tue, 02 Aug 2022 18:28:30: 2000000 INFO @ Tue, 02 Aug 2022 18:28:34: 8000000 INFO @ Tue, 02 Aug 2022 18:28:35: 3000000 INFO @ Tue, 02 Aug 2022 18:28:39: 4000000 INFO @ Tue, 02 Aug 2022 18:28:40: 9000000 INFO @ Tue, 02 Aug 2022 18:28:44: 5000000 INFO @ Tue, 02 Aug 2022 18:28:46: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:28:49: 6000000 INFO @ Tue, 02 Aug 2022 18:28:51: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:28:51: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:28:51: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:28:51: 11000000 INFO @ Tue, 02 Aug 2022 18:28:53: 7000000 INFO @ Tue, 02 Aug 2022 18:28:56: 1000000 INFO @ Tue, 02 Aug 2022 18:28:57: 12000000 INFO @ Tue, 02 Aug 2022 18:28:58: 8000000 INFO @ Tue, 02 Aug 2022 18:29:01: 2000000 INFO @ Tue, 02 Aug 2022 18:29:03: 13000000 INFO @ Tue, 02 Aug 2022 18:29:03: 9000000 INFO @ Tue, 02 Aug 2022 18:29:07: 3000000 INFO @ Tue, 02 Aug 2022 18:29:07: 10000000 INFO @ Tue, 02 Aug 2022 18:29:09: 14000000 INFO @ Tue, 02 Aug 2022 18:29:12: 4000000 INFO @ Tue, 02 Aug 2022 18:29:12: 11000000 INFO @ Tue, 02 Aug 2022 18:29:14: 15000000 INFO @ Tue, 02 Aug 2022 18:29:17: 12000000 INFO @ Tue, 02 Aug 2022 18:29:17: 5000000 INFO @ Tue, 02 Aug 2022 18:29:20: 16000000 INFO @ Tue, 02 Aug 2022 18:29:22: 13000000 INFO @ Tue, 02 Aug 2022 18:29:22: 6000000 INFO @ Tue, 02 Aug 2022 18:29:27: 17000000 INFO @ Tue, 02 Aug 2022 18:29:28: 14000000 INFO @ Tue, 02 Aug 2022 18:29:29: 7000000 INFO @ Tue, 02 Aug 2022 18:29:32: 15000000 INFO @ Tue, 02 Aug 2022 18:29:33: 18000000 INFO @ Tue, 02 Aug 2022 18:29:35: 8000000 INFO @ Tue, 02 Aug 2022 18:29:37: 16000000 INFO @ Tue, 02 Aug 2022 18:29:39: 19000000 INFO @ Tue, 02 Aug 2022 18:29:40: 9000000 INFO @ Tue, 02 Aug 2022 18:29:42: 17000000 INFO @ Tue, 02 Aug 2022 18:29:45: 10000000 INFO @ Tue, 02 Aug 2022 18:29:45: 20000000 INFO @ Tue, 02 Aug 2022 18:29:47: 18000000 INFO @ Tue, 02 Aug 2022 18:29:50: 11000000 INFO @ Tue, 02 Aug 2022 18:29:51: 21000000 INFO @ Tue, 02 Aug 2022 18:29:51: 19000000 INFO @ Tue, 02 Aug 2022 18:29:55: 12000000 INFO @ Tue, 02 Aug 2022 18:29:56: 20000000 INFO @ Tue, 02 Aug 2022 18:29:57: 22000000 INFO @ Tue, 02 Aug 2022 18:30:01: 21000000 INFO @ Tue, 02 Aug 2022 18:30:02: 13000000 INFO @ Tue, 02 Aug 2022 18:30:03: 23000000 INFO @ Tue, 02 Aug 2022 18:30:06: 22000000 INFO @ Tue, 02 Aug 2022 18:30:08: 14000000 INFO @ Tue, 02 Aug 2022 18:30:09: 24000000 INFO @ Tue, 02 Aug 2022 18:30:10: 23000000 INFO @ Tue, 02 Aug 2022 18:30:13: 15000000 INFO @ Tue, 02 Aug 2022 18:30:15: 24000000 INFO @ Tue, 02 Aug 2022 18:30:15: 25000000 INFO @ Tue, 02 Aug 2022 18:30:18: 16000000 INFO @ Tue, 02 Aug 2022 18:30:20: 25000000 INFO @ Tue, 02 Aug 2022 18:30:21: 26000000 INFO @ Tue, 02 Aug 2022 18:30:23: 17000000 INFO @ Tue, 02 Aug 2022 18:30:24: 26000000 INFO @ Tue, 02 Aug 2022 18:30:28: 27000000 INFO @ Tue, 02 Aug 2022 18:30:28: 18000000 INFO @ Tue, 02 Aug 2022 18:30:29: 27000000 INFO @ Tue, 02 Aug 2022 18:30:33: 28000000 INFO @ Tue, 02 Aug 2022 18:30:33: 28000000 INFO @ Tue, 02 Aug 2022 18:30:34: 19000000 INFO @ Tue, 02 Aug 2022 18:30:38: 29000000 INFO @ Tue, 02 Aug 2022 18:30:38: 29000000 INFO @ Tue, 02 Aug 2022 18:30:38: 20000000 INFO @ Tue, 02 Aug 2022 18:30:43: 30000000 INFO @ Tue, 02 Aug 2022 18:30:43: 30000000 INFO @ Tue, 02 Aug 2022 18:30:44: 21000000 INFO @ Tue, 02 Aug 2022 18:30:48: 31000000 INFO @ Tue, 02 Aug 2022 18:30:48: 31000000 INFO @ Tue, 02 Aug 2022 18:30:49: 22000000 INFO @ Tue, 02 Aug 2022 18:30:53: 32000000 INFO @ Tue, 02 Aug 2022 18:30:53: 32000000 INFO @ Tue, 02 Aug 2022 18:30:54: 23000000 INFO @ Tue, 02 Aug 2022 18:30:58: 33000000 INFO @ Tue, 02 Aug 2022 18:30:58: 33000000 INFO @ Tue, 02 Aug 2022 18:30:59: 24000000 INFO @ Tue, 02 Aug 2022 18:31:03: 34000000 INFO @ Tue, 02 Aug 2022 18:31:03: 34000000 INFO @ Tue, 02 Aug 2022 18:31:04: 25000000 INFO @ Tue, 02 Aug 2022 18:31:09: 26000000 INFO @ Tue, 02 Aug 2022 18:31:09: 35000000 INFO @ Tue, 02 Aug 2022 18:31:09: 35000000 INFO @ Tue, 02 Aug 2022 18:31:14: 27000000 INFO @ Tue, 02 Aug 2022 18:31:14: 36000000 INFO @ Tue, 02 Aug 2022 18:31:14: 36000000 INFO @ Tue, 02 Aug 2022 18:31:19: 28000000 INFO @ Tue, 02 Aug 2022 18:31:19: 37000000 INFO @ Tue, 02 Aug 2022 18:31:19: 37000000 INFO @ Tue, 02 Aug 2022 18:31:24: 29000000 INFO @ Tue, 02 Aug 2022 18:31:24: 38000000 INFO @ Tue, 02 Aug 2022 18:31:24: 38000000 INFO @ Tue, 02 Aug 2022 18:31:29: 30000000 INFO @ Tue, 02 Aug 2022 18:31:29: 39000000 INFO @ Tue, 02 Aug 2022 18:31:30: 39000000 INFO @ Tue, 02 Aug 2022 18:31:34: 31000000 INFO @ Tue, 02 Aug 2022 18:31:34: 40000000 INFO @ Tue, 02 Aug 2022 18:31:35: 40000000 INFO @ Tue, 02 Aug 2022 18:31:39: 32000000 INFO @ Tue, 02 Aug 2022 18:31:39: 41000000 INFO @ Tue, 02 Aug 2022 18:31:40: 41000000 INFO @ Tue, 02 Aug 2022 18:31:44: 33000000 INFO @ Tue, 02 Aug 2022 18:31:45: 42000000 INFO @ Tue, 02 Aug 2022 18:31:45: 42000000 INFO @ Tue, 02 Aug 2022 18:31:49: 34000000 INFO @ Tue, 02 Aug 2022 18:31:50: 43000000 INFO @ Tue, 02 Aug 2022 18:31:50: 43000000 INFO @ Tue, 02 Aug 2022 18:31:53: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 18:31:53: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 18:31:53: #1 total tags in treatment: 16827860 INFO @ Tue, 02 Aug 2022 18:31:53: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:31:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:31:54: #1 tags after filtering in treatment: 12095572 INFO @ Tue, 02 Aug 2022 18:31:54: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 02 Aug 2022 18:31:54: #1 finished! INFO @ Tue, 02 Aug 2022 18:31:54: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:31:54: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:31:54: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 18:31:54: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 18:31:54: #1 total tags in treatment: 16827860 INFO @ Tue, 02 Aug 2022 18:31:54: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:31:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:31:54: #1 tags after filtering in treatment: 12095572 INFO @ Tue, 02 Aug 2022 18:31:54: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 02 Aug 2022 18:31:54: #1 finished! INFO @ Tue, 02 Aug 2022 18:31:54: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:31:54: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:31:54: 35000000 INFO @ Tue, 02 Aug 2022 18:31:55: #2 number of paired peaks: 1282 INFO @ Tue, 02 Aug 2022 18:31:55: start model_add_line... INFO @ Tue, 02 Aug 2022 18:31:55: start X-correlation... INFO @ Tue, 02 Aug 2022 18:31:55: end of X-cor INFO @ Tue, 02 Aug 2022 18:31:55: #2 finished! INFO @ Tue, 02 Aug 2022 18:31:55: #2 predicted fragment length is 56 bps INFO @ Tue, 02 Aug 2022 18:31:55: #2 alternative fragment length(s) may be 56 bps INFO @ Tue, 02 Aug 2022 18:31:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10_model.r WARNING @ Tue, 02 Aug 2022 18:31:55: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:31:55: #2 You may need to consider one of the other alternative d(s): 56 WARNING @ Tue, 02 Aug 2022 18:31:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:31:55: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:31:55: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:31:55: #2 number of paired peaks: 1282 INFO @ Tue, 02 Aug 2022 18:31:55: start model_add_line... INFO @ Tue, 02 Aug 2022 18:31:55: start X-correlation... INFO @ Tue, 02 Aug 2022 18:31:55: end of X-cor INFO @ Tue, 02 Aug 2022 18:31:55: #2 finished! INFO @ Tue, 02 Aug 2022 18:31:55: #2 predicted fragment length is 56 bps INFO @ Tue, 02 Aug 2022 18:31:55: #2 alternative fragment length(s) may be 56 bps INFO @ Tue, 02 Aug 2022 18:31:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05_model.r WARNING @ Tue, 02 Aug 2022 18:31:55: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:31:55: #2 You may need to consider one of the other alternative d(s): 56 WARNING @ Tue, 02 Aug 2022 18:31:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:31:55: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:31:55: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:32:00: 36000000 INFO @ Tue, 02 Aug 2022 18:32:05: 37000000 INFO @ Tue, 02 Aug 2022 18:32:10: 38000000 INFO @ Tue, 02 Aug 2022 18:32:15: 39000000 INFO @ Tue, 02 Aug 2022 18:32:18: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:32:18: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:32:20: 40000000 INFO @ Tue, 02 Aug 2022 18:32:25: 41000000 INFO @ Tue, 02 Aug 2022 18:32:30: 42000000 INFO @ Tue, 02 Aug 2022 18:32:31: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10_peaks.xls INFO @ Tue, 02 Aug 2022 18:32:31: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:32:31: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.10_summits.bed INFO @ Tue, 02 Aug 2022 18:32:31: Done! INFO @ Tue, 02 Aug 2022 18:32:32: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05_peaks.xls INFO @ Tue, 02 Aug 2022 18:32:32: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05_peaks.narrowPeak pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (8418 records, 4 fields): 32 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:32:32: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.05_summits.bed INFO @ Tue, 02 Aug 2022 18:32:32: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (17272 records, 4 fields): 43 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:32:34: 43000000 INFO @ Tue, 02 Aug 2022 18:32:38: #1 tag size is determined as 50 bps INFO @ Tue, 02 Aug 2022 18:32:38: #1 tag size = 50 INFO @ Tue, 02 Aug 2022 18:32:38: #1 total tags in treatment: 16827860 INFO @ Tue, 02 Aug 2022 18:32:38: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:32:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:32:39: #1 tags after filtering in treatment: 12095572 INFO @ Tue, 02 Aug 2022 18:32:39: #1 Redundant rate of treatment: 0.28 INFO @ Tue, 02 Aug 2022 18:32:39: #1 finished! INFO @ Tue, 02 Aug 2022 18:32:39: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:32:39: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:32:39: #2 number of paired peaks: 1282 INFO @ Tue, 02 Aug 2022 18:32:39: start model_add_line... INFO @ Tue, 02 Aug 2022 18:32:40: start X-correlation... INFO @ Tue, 02 Aug 2022 18:32:40: end of X-cor INFO @ Tue, 02 Aug 2022 18:32:40: #2 finished! INFO @ Tue, 02 Aug 2022 18:32:40: #2 predicted fragment length is 56 bps INFO @ Tue, 02 Aug 2022 18:32:40: #2 alternative fragment length(s) may be 56 bps INFO @ Tue, 02 Aug 2022 18:32:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20_model.r WARNING @ Tue, 02 Aug 2022 18:32:40: #2 Since the d (56) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:32:40: #2 You may need to consider one of the other alternative d(s): 56 WARNING @ Tue, 02 Aug 2022 18:32:40: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:32:40: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:32:40: #3 Pre-compute pvalue-qvalue table... BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 18:33:01: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:33:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20_peaks.xls INFO @ Tue, 02 Aug 2022 18:33:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:33:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX12178813/SRX12178813.20_summits.bed INFO @ Tue, 02 Aug 2022 18:33:13: Done! pass1 - making usageList (11 chroms): 1 millis pass2 - checking and writing primary data (1030 records, 4 fields): 69 millis CompletedMACS2peakCalling BigWig に変換しました。