Job ID = 16439702 SRX = SRX11499370 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 29401063 spots for SRR15192729/SRR15192729.sra Written 29401063 spots for SRR15192729/SRR15192729.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440115 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:05:47 29401063 reads; of these: 29401063 (100.00%) were paired; of these: 9475466 (32.23%) aligned concordantly 0 times 18850576 (64.12%) aligned concordantly exactly 1 time 1075021 (3.66%) aligned concordantly >1 times ---- 9475466 pairs aligned concordantly 0 times; of these: 2906242 (30.67%) aligned discordantly 1 time ---- 6569224 pairs aligned 0 times concordantly or discordantly; of these: 13138448 mates make up the pairs; of these: 11556154 (87.96%) aligned 0 times 1184641 (9.02%) aligned exactly 1 time 397653 (3.03%) aligned >1 times 80.35% overall alignment rate Time searching: 01:05:48 Overall time: 01:05:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2539936 / 21678353 = 0.1172 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:42:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:42:33: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:42:33: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:42:52: 1000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:43:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:43:03: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:43:03: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:43:12: 2000000 INFO @ Tue, 02 Aug 2022 17:43:19: 1000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:43:32: 3000000 INFO @ Tue, 02 Aug 2022 17:43:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:43:33: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:43:33: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:43:34: 2000000 INFO @ Tue, 02 Aug 2022 17:43:49: 3000000 INFO @ Tue, 02 Aug 2022 17:43:51: 4000000 INFO @ Tue, 02 Aug 2022 17:43:52: 1000000 INFO @ Tue, 02 Aug 2022 17:44:03: 4000000 INFO @ Tue, 02 Aug 2022 17:44:11: 5000000 INFO @ Tue, 02 Aug 2022 17:44:11: 2000000 INFO @ Tue, 02 Aug 2022 17:44:19: 5000000 INFO @ Tue, 02 Aug 2022 17:44:32: 6000000 INFO @ Tue, 02 Aug 2022 17:44:32: 3000000 INFO @ Tue, 02 Aug 2022 17:44:34: 6000000 INFO @ Tue, 02 Aug 2022 17:44:49: 7000000 INFO @ Tue, 02 Aug 2022 17:44:52: 7000000 INFO @ Tue, 02 Aug 2022 17:44:52: 4000000 INFO @ Tue, 02 Aug 2022 17:45:04: 8000000 INFO @ Tue, 02 Aug 2022 17:45:12: 5000000 INFO @ Tue, 02 Aug 2022 17:45:13: 8000000 INFO @ Tue, 02 Aug 2022 17:45:19: 9000000 INFO @ Tue, 02 Aug 2022 17:45:32: 6000000 INFO @ Tue, 02 Aug 2022 17:45:34: 10000000 INFO @ Tue, 02 Aug 2022 17:45:34: 9000000 INFO @ Tue, 02 Aug 2022 17:45:50: 11000000 INFO @ Tue, 02 Aug 2022 17:45:51: 7000000 INFO @ Tue, 02 Aug 2022 17:45:53: 10000000 INFO @ Tue, 02 Aug 2022 17:46:07: 12000000 INFO @ Tue, 02 Aug 2022 17:46:09: 11000000 INFO @ Tue, 02 Aug 2022 17:46:11: 8000000 INFO @ Tue, 02 Aug 2022 17:46:25: 13000000 INFO @ Tue, 02 Aug 2022 17:46:26: 12000000 INFO @ Tue, 02 Aug 2022 17:46:34: 9000000 INFO @ Tue, 02 Aug 2022 17:46:42: 14000000 INFO @ Tue, 02 Aug 2022 17:46:42: 13000000 INFO @ Tue, 02 Aug 2022 17:46:56: 10000000 INFO @ Tue, 02 Aug 2022 17:46:58: 15000000 INFO @ Tue, 02 Aug 2022 17:46:59: 14000000 INFO @ Tue, 02 Aug 2022 17:47:14: 16000000 INFO @ Tue, 02 Aug 2022 17:47:15: 15000000 INFO @ Tue, 02 Aug 2022 17:47:20: 11000000 INFO @ Tue, 02 Aug 2022 17:47:29: 16000000 INFO @ Tue, 02 Aug 2022 17:47:32: 17000000 INFO @ Tue, 02 Aug 2022 17:47:42: 12000000 INFO @ Tue, 02 Aug 2022 17:47:45: 17000000 INFO @ Tue, 02 Aug 2022 17:47:48: 18000000 INFO @ Tue, 02 Aug 2022 17:48:01: 18000000 INFO @ Tue, 02 Aug 2022 17:48:04: 13000000 INFO @ Tue, 02 Aug 2022 17:48:05: 19000000 INFO @ Tue, 02 Aug 2022 17:48:16: 19000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 17:48:22: 20000000 INFO @ Tue, 02 Aug 2022 17:48:25: 14000000 INFO @ Tue, 02 Aug 2022 17:48:34: 20000000 INFO @ Tue, 02 Aug 2022 17:48:39: 21000000 INFO @ Tue, 02 Aug 2022 17:48:48: 15000000 INFO @ Tue, 02 Aug 2022 17:48:51: 21000000 INFO @ Tue, 02 Aug 2022 17:48:58: 22000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 17:49:07: 22000000 INFO @ Tue, 02 Aug 2022 17:49:09: 16000000 INFO @ Tue, 02 Aug 2022 17:49:16: 23000000 INFO @ Tue, 02 Aug 2022 17:49:23: 23000000 INFO @ Tue, 02 Aug 2022 17:49:30: 17000000 INFO @ Tue, 02 Aug 2022 17:49:35: 24000000 INFO @ Tue, 02 Aug 2022 17:49:39: 24000000 INFO @ Tue, 02 Aug 2022 17:49:52: 18000000 INFO @ Tue, 02 Aug 2022 17:49:56: 25000000 INFO @ Tue, 02 Aug 2022 17:49:56: 25000000 INFO @ Tue, 02 Aug 2022 17:50:12: 26000000 INFO @ Tue, 02 Aug 2022 17:50:13: 19000000 INFO @ Tue, 02 Aug 2022 17:50:16: 26000000 INFO @ Tue, 02 Aug 2022 17:50:30: 27000000 INFO @ Tue, 02 Aug 2022 17:50:34: 20000000 INFO @ Tue, 02 Aug 2022 17:50:37: 27000000 INFO @ Tue, 02 Aug 2022 17:50:47: 28000000 INFO @ Tue, 02 Aug 2022 17:50:55: 21000000 INFO @ Tue, 02 Aug 2022 17:50:58: 28000000 INFO @ Tue, 02 Aug 2022 17:51:04: 29000000 INFO @ Tue, 02 Aug 2022 17:51:16: 22000000 INFO @ Tue, 02 Aug 2022 17:51:18: 29000000 INFO @ Tue, 02 Aug 2022 17:51:22: 30000000 INFO @ Tue, 02 Aug 2022 17:51:37: 23000000 INFO @ Tue, 02 Aug 2022 17:51:41: 31000000 INFO @ Tue, 02 Aug 2022 17:51:41: 30000000 INFO @ Tue, 02 Aug 2022 17:52:00: 32000000 INFO @ Tue, 02 Aug 2022 17:52:00: 24000000 INFO @ Tue, 02 Aug 2022 17:52:05: 31000000 INFO @ Tue, 02 Aug 2022 17:52:19: 33000000 INFO @ Tue, 02 Aug 2022 17:52:23: 25000000 INFO @ Tue, 02 Aug 2022 17:52:26: 32000000 INFO @ Tue, 02 Aug 2022 17:52:37: 34000000 INFO @ Tue, 02 Aug 2022 17:52:46: 26000000 INFO @ Tue, 02 Aug 2022 17:52:47: 33000000 INFO @ Tue, 02 Aug 2022 17:52:55: 35000000 INFO @ Tue, 02 Aug 2022 17:53:09: 34000000 INFO @ Tue, 02 Aug 2022 17:53:09: 27000000 INFO @ Tue, 02 Aug 2022 17:53:15: 36000000 INFO @ Tue, 02 Aug 2022 17:53:31: 35000000 INFO @ Tue, 02 Aug 2022 17:53:33: 28000000 INFO @ Tue, 02 Aug 2022 17:53:34: 37000000 INFO @ Tue, 02 Aug 2022 17:53:52: 36000000 INFO @ Tue, 02 Aug 2022 17:53:53: 38000000 INFO @ Tue, 02 Aug 2022 17:53:56: 29000000 INFO @ Tue, 02 Aug 2022 17:54:10: 39000000 INFO @ Tue, 02 Aug 2022 17:54:14: 37000000 INFO @ Tue, 02 Aug 2022 17:54:20: 30000000 INFO @ Tue, 02 Aug 2022 17:54:28: 40000000 INFO @ Tue, 02 Aug 2022 17:54:36: 38000000 INFO @ Tue, 02 Aug 2022 17:54:44: 31000000 INFO @ Tue, 02 Aug 2022 17:54:47: 41000000 INFO @ Tue, 02 Aug 2022 17:54:58: 39000000 INFO @ Tue, 02 Aug 2022 17:55:05: 42000000 INFO @ Tue, 02 Aug 2022 17:55:08: 32000000 INFO @ Tue, 02 Aug 2022 17:55:08: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:55:08: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:55:08: #1 total tags in treatment: 17581630 INFO @ Tue, 02 Aug 2022 17:55:08: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:55:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:55:09: #1 tags after filtering in treatment: 8601794 INFO @ Tue, 02 Aug 2022 17:55:09: #1 Redundant rate of treatment: 0.51 INFO @ Tue, 02 Aug 2022 17:55:09: #1 finished! INFO @ Tue, 02 Aug 2022 17:55:09: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:55:09: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:55:10: #2 number of paired peaks: 8554 INFO @ Tue, 02 Aug 2022 17:55:10: start model_add_line... INFO @ Tue, 02 Aug 2022 17:55:11: start X-correlation... INFO @ Tue, 02 Aug 2022 17:55:11: end of X-cor INFO @ Tue, 02 Aug 2022 17:55:11: #2 finished! INFO @ Tue, 02 Aug 2022 17:55:11: #2 predicted fragment length is 288 bps INFO @ Tue, 02 Aug 2022 17:55:11: #2 alternative fragment length(s) may be 288 bps INFO @ Tue, 02 Aug 2022 17:55:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05_model.r WARNING @ Tue, 02 Aug 2022 17:55:11: #2 Since the d (288) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:55:11: #2 You may need to consider one of the other alternative d(s): 288 WARNING @ Tue, 02 Aug 2022 17:55:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:55:11: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:55:11: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:55:21: 40000000 INFO @ Tue, 02 Aug 2022 17:55:30: 33000000 INFO @ Tue, 02 Aug 2022 17:55:43: 41000000 INFO @ Tue, 02 Aug 2022 17:55:51: 34000000 INFO @ Tue, 02 Aug 2022 17:55:56: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:56:04: 42000000 INFO @ Tue, 02 Aug 2022 17:56:08: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:56:08: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:56:08: #1 total tags in treatment: 17581630 INFO @ Tue, 02 Aug 2022 17:56:08: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:56:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:56:08: #1 tags after filtering in treatment: 8601794 INFO @ Tue, 02 Aug 2022 17:56:08: #1 Redundant rate of treatment: 0.51 INFO @ Tue, 02 Aug 2022 17:56:08: #1 finished! INFO @ Tue, 02 Aug 2022 17:56:08: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:56:08: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:56:09: 35000000 INFO @ Tue, 02 Aug 2022 17:56:10: #2 number of paired peaks: 8554 INFO @ Tue, 02 Aug 2022 17:56:10: start model_add_line... INFO @ Tue, 02 Aug 2022 17:56:11: start X-correlation... INFO @ Tue, 02 Aug 2022 17:56:11: end of X-cor INFO @ Tue, 02 Aug 2022 17:56:11: #2 finished! INFO @ Tue, 02 Aug 2022 17:56:11: #2 predicted fragment length is 288 bps INFO @ Tue, 02 Aug 2022 17:56:11: #2 alternative fragment length(s) may be 288 bps INFO @ Tue, 02 Aug 2022 17:56:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10_model.r WARNING @ Tue, 02 Aug 2022 17:56:11: #2 Since the d (288) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:56:11: #2 You may need to consider one of the other alternative d(s): 288 WARNING @ Tue, 02 Aug 2022 17:56:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:56:11: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:56:11: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:56:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05_peaks.xls INFO @ Tue, 02 Aug 2022 17:56:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:56:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.05_summits.bed INFO @ Tue, 02 Aug 2022 17:56:14: Done! pass1 - making usageList (14 chroms): 4 millis pass2 - checking and writing primary data (7965 records, 4 fields): 32 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 17:56:26: 36000000 INFO @ Tue, 02 Aug 2022 17:56:44: 37000000 INFO @ Tue, 02 Aug 2022 17:56:52: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:57:02: 38000000 INFO @ Tue, 02 Aug 2022 17:57:08: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10_peaks.xls INFO @ Tue, 02 Aug 2022 17:57:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:57:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.10_summits.bed INFO @ Tue, 02 Aug 2022 17:57:08: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (7272 records, 4 fields): 44 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 17:57:19: 39000000 INFO @ Tue, 02 Aug 2022 17:57:35: 40000000 INFO @ Tue, 02 Aug 2022 17:57:51: 41000000 INFO @ Tue, 02 Aug 2022 17:58:07: 42000000 INFO @ Tue, 02 Aug 2022 17:58:10: #1 tag size is determined as 144 bps INFO @ Tue, 02 Aug 2022 17:58:10: #1 tag size = 144 INFO @ Tue, 02 Aug 2022 17:58:10: #1 total tags in treatment: 17581630 INFO @ Tue, 02 Aug 2022 17:58:10: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:58:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:58:11: #1 tags after filtering in treatment: 8601794 INFO @ Tue, 02 Aug 2022 17:58:11: #1 Redundant rate of treatment: 0.51 INFO @ Tue, 02 Aug 2022 17:58:11: #1 finished! INFO @ Tue, 02 Aug 2022 17:58:11: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:58:11: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:58:13: #2 number of paired peaks: 8554 INFO @ Tue, 02 Aug 2022 17:58:13: start model_add_line... INFO @ Tue, 02 Aug 2022 17:58:13: start X-correlation... INFO @ Tue, 02 Aug 2022 17:58:13: end of X-cor INFO @ Tue, 02 Aug 2022 17:58:13: #2 finished! INFO @ Tue, 02 Aug 2022 17:58:13: #2 predicted fragment length is 288 bps INFO @ Tue, 02 Aug 2022 17:58:13: #2 alternative fragment length(s) may be 288 bps INFO @ Tue, 02 Aug 2022 17:58:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20_model.r WARNING @ Tue, 02 Aug 2022 17:58:13: #2 Since the d (288) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:58:13: #2 You may need to consider one of the other alternative d(s): 288 WARNING @ Tue, 02 Aug 2022 17:58:13: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:58:13: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:58:13: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:58:56: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:59:11: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20_peaks.xls INFO @ Tue, 02 Aug 2022 17:59:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:59:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11499370/SRX11499370.20_summits.bed INFO @ Tue, 02 Aug 2022 17:59:12: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (6458 records, 4 fields): 60 millis CompletedMACS2peakCalling