Job ID = 1293793 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-02T17:30:19 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:39:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:43:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:43:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:43:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:43:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:45:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:48:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T17:56:25 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T18:41:03 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T18:41:03 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T19:25:02 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T19:43:08 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-06-02T20:06:11 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 83,100,793 reads read : 166,201,586 reads written : 166,201,586 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 03:54:20 83100793 reads; of these: 83100793 (100.00%) were paired; of these: 12169197 (14.64%) aligned concordantly 0 times 58479923 (70.37%) aligned concordantly exactly 1 time 12451673 (14.98%) aligned concordantly >1 times ---- 12169197 pairs aligned concordantly 0 times; of these: 3316232 (27.25%) aligned discordantly 1 time ---- 8852965 pairs aligned 0 times concordantly or discordantly; of these: 17705930 mates make up the pairs; of these: 11781932 (66.54%) aligned 0 times 3835264 (21.66%) aligned exactly 1 time 2088734 (11.80%) aligned >1 times 92.91% overall alignment rate Time searching: 03:54:21 Overall time: 03:54:21 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 68 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 58449868 / 73886357 = 0.7911 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Mon, 03 Jun 2019 10:03:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 10:03:13: #1 read tag files... INFO @ Mon, 03 Jun 2019 10:03:13: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 10:03:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 10:03:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 03 Jun 2019 10:03:13: #1 read tag files... INFO @ Mon, 03 Jun 2019 10:03:13: #1 read tag files... INFO @ Mon, 03 Jun 2019 10:03:13: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 10:03:13: #1 read treatment tags... INFO @ Mon, 03 Jun 2019 10:03:23: 1000000 INFO @ Mon, 03 Jun 2019 10:03:27: 1000000 INFO @ Mon, 03 Jun 2019 10:03:27: 1000000 INFO @ Mon, 03 Jun 2019 10:03:33: 2000000 INFO @ Mon, 03 Jun 2019 10:03:40: 2000000 INFO @ Mon, 03 Jun 2019 10:03:40: 2000000 INFO @ Mon, 03 Jun 2019 10:03:42: 3000000 INFO @ Mon, 03 Jun 2019 10:03:52: 4000000 INFO @ Mon, 03 Jun 2019 10:03:53: 3000000 INFO @ Mon, 03 Jun 2019 10:03:53: 3000000 INFO @ Mon, 03 Jun 2019 10:04:01: 5000000 INFO @ Mon, 03 Jun 2019 10:04:05: 4000000 INFO @ Mon, 03 Jun 2019 10:04:05: 4000000 INFO @ Mon, 03 Jun 2019 10:04:11: 6000000 INFO @ Mon, 03 Jun 2019 10:04:18: 5000000 INFO @ Mon, 03 Jun 2019 10:04:18: 5000000 INFO @ Mon, 03 Jun 2019 10:04:20: 7000000 INFO @ Mon, 03 Jun 2019 10:04:29: 8000000 INFO @ Mon, 03 Jun 2019 10:04:31: 6000000 INFO @ Mon, 03 Jun 2019 10:04:31: 6000000 INFO @ Mon, 03 Jun 2019 10:04:39: 9000000 INFO @ Mon, 03 Jun 2019 10:04:43: 7000000 INFO @ Mon, 03 Jun 2019 10:04:43: 7000000 INFO @ Mon, 03 Jun 2019 10:04:48: 10000000 INFO @ Mon, 03 Jun 2019 10:04:55: 8000000 INFO @ Mon, 03 Jun 2019 10:04:55: 8000000 INFO @ Mon, 03 Jun 2019 10:04:57: 11000000 INFO @ Mon, 03 Jun 2019 10:05:06: 12000000 INFO @ Mon, 03 Jun 2019 10:05:07: 9000000 INFO @ Mon, 03 Jun 2019 10:05:07: 9000000 INFO @ Mon, 03 Jun 2019 10:05:16: 13000000 INFO @ Mon, 03 Jun 2019 10:05:19: 10000000 INFO @ Mon, 03 Jun 2019 10:05:19: 10000000 INFO @ Mon, 03 Jun 2019 10:05:25: 14000000 INFO @ Mon, 03 Jun 2019 10:05:31: 11000000 INFO @ Mon, 03 Jun 2019 10:05:31: 11000000 INFO @ Mon, 03 Jun 2019 10:05:34: 15000000 INFO @ Mon, 03 Jun 2019 10:05:43: 12000000 INFO @ Mon, 03 Jun 2019 10:05:43: 12000000 INFO @ Mon, 03 Jun 2019 10:05:43: 16000000 INFO @ Mon, 03 Jun 2019 10:05:52: 17000000 INFO @ Mon, 03 Jun 2019 10:05:55: 13000000 INFO @ Mon, 03 Jun 2019 10:05:55: 13000000 INFO @ Mon, 03 Jun 2019 10:06:01: 18000000 INFO @ Mon, 03 Jun 2019 10:06:07: 14000000 INFO @ Mon, 03 Jun 2019 10:06:07: 14000000 INFO @ Mon, 03 Jun 2019 10:06:11: 19000000 INFO @ Mon, 03 Jun 2019 10:06:19: 15000000 INFO @ Mon, 03 Jun 2019 10:06:20: 15000000 INFO @ Mon, 03 Jun 2019 10:06:20: 20000000 INFO @ Mon, 03 Jun 2019 10:06:29: 21000000 INFO @ Mon, 03 Jun 2019 10:06:31: 16000000 INFO @ Mon, 03 Jun 2019 10:06:33: 16000000 INFO @ Mon, 03 Jun 2019 10:06:39: 22000000 INFO @ Mon, 03 Jun 2019 10:06:43: 17000000 INFO @ Mon, 03 Jun 2019 10:06:45: 17000000 INFO @ Mon, 03 Jun 2019 10:06:49: 23000000 INFO @ Mon, 03 Jun 2019 10:06:55: 18000000 INFO @ Mon, 03 Jun 2019 10:06:57: 18000000 INFO @ Mon, 03 Jun 2019 10:06:58: 24000000 INFO @ Mon, 03 Jun 2019 10:07:07: 19000000 INFO @ Mon, 03 Jun 2019 10:07:08: 25000000 INFO @ Mon, 03 Jun 2019 10:07:09: 19000000 INFO @ Mon, 03 Jun 2019 10:07:18: 26000000 INFO @ Mon, 03 Jun 2019 10:07:19: 20000000 INFO @ Mon, 03 Jun 2019 10:07:21: 20000000 INFO @ Mon, 03 Jun 2019 10:07:27: 27000000 INFO @ Mon, 03 Jun 2019 10:07:32: 21000000 INFO @ Mon, 03 Jun 2019 10:07:32: 21000000 INFO @ Mon, 03 Jun 2019 10:07:37: 28000000 INFO @ Mon, 03 Jun 2019 10:07:44: 22000000 INFO @ Mon, 03 Jun 2019 10:07:44: 22000000 INFO @ Mon, 03 Jun 2019 10:07:46: 29000000 INFO @ Mon, 03 Jun 2019 10:07:56: 30000000 INFO @ Mon, 03 Jun 2019 10:07:56: 23000000 INFO @ Mon, 03 Jun 2019 10:07:57: 23000000 INFO @ Mon, 03 Jun 2019 10:08:06: 31000000 INFO @ Mon, 03 Jun 2019 10:08:08: 24000000 INFO @ Mon, 03 Jun 2019 10:08:09: 24000000 INFO @ Mon, 03 Jun 2019 10:08:15: 32000000 INFO @ Mon, 03 Jun 2019 10:08:20: 25000000 INFO @ Mon, 03 Jun 2019 10:08:22: 25000000 INFO @ Mon, 03 Jun 2019 10:08:25: 33000000 INFO @ Mon, 03 Jun 2019 10:08:32: 26000000 INFO @ Mon, 03 Jun 2019 10:08:34: 26000000 INFO @ Mon, 03 Jun 2019 10:08:34: 34000000 INFO @ Mon, 03 Jun 2019 10:08:44: 35000000 INFO @ Mon, 03 Jun 2019 10:08:44: 27000000 INFO @ Mon, 03 Jun 2019 10:08:47: 27000000 INFO @ Mon, 03 Jun 2019 10:08:53: 36000000 INFO @ Mon, 03 Jun 2019 10:08:56: 28000000 INFO @ Mon, 03 Jun 2019 10:09:00: 28000000 INFO @ Mon, 03 Jun 2019 10:09:02: 37000000 INFO @ Mon, 03 Jun 2019 10:09:07: #1 tag size is determined as 100 bps INFO @ Mon, 03 Jun 2019 10:09:07: #1 tag size = 100 INFO @ Mon, 03 Jun 2019 10:09:07: #1 total tags in treatment: 14264373 INFO @ Mon, 03 Jun 2019 10:09:07: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 10:09:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 10:09:08: #1 tags after filtering in treatment: 12147671 INFO @ Mon, 03 Jun 2019 10:09:08: #1 Redundant rate of treatment: 0.15 INFO @ Mon, 03 Jun 2019 10:09:08: #1 finished! INFO @ Mon, 03 Jun 2019 10:09:08: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 10:09:08: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 10:09:08: 29000000 INFO @ Mon, 03 Jun 2019 10:09:09: #2 number of paired peaks: 664 WARNING @ Mon, 03 Jun 2019 10:09:09: Fewer paired peaks (664) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 664 pairs to build model! INFO @ Mon, 03 Jun 2019 10:09:09: start model_add_line... INFO @ Mon, 03 Jun 2019 10:09:09: start X-correlation... INFO @ Mon, 03 Jun 2019 10:09:09: end of X-cor INFO @ Mon, 03 Jun 2019 10:09:09: #2 finished! INFO @ Mon, 03 Jun 2019 10:09:09: #2 predicted fragment length is 215 bps INFO @ Mon, 03 Jun 2019 10:09:09: #2 alternative fragment length(s) may be 215 bps INFO @ Mon, 03 Jun 2019 10:09:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10_model.r INFO @ Mon, 03 Jun 2019 10:09:09: #3 Call peaks... INFO @ Mon, 03 Jun 2019 10:09:09: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 10:09:12: 29000000 INFO @ Mon, 03 Jun 2019 10:09:20: 30000000 INFO @ Mon, 03 Jun 2019 10:09:24: 30000000 INFO @ Mon, 03 Jun 2019 10:09:31: 31000000 INFO @ Mon, 03 Jun 2019 10:09:37: 31000000 INFO @ Mon, 03 Jun 2019 10:09:43: 32000000 INFO @ Mon, 03 Jun 2019 10:09:44: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 10:09:49: 32000000 INFO @ Mon, 03 Jun 2019 10:09:55: 33000000 INFO @ Mon, 03 Jun 2019 10:10:01: 33000000 INFO @ Mon, 03 Jun 2019 10:10:02: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10_peaks.xls INFO @ Mon, 03 Jun 2019 10:10:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 10:10:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.10_summits.bed INFO @ Mon, 03 Jun 2019 10:10:02: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (4709 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 10:10:06: 34000000 INFO @ Mon, 03 Jun 2019 10:10:14: 34000000 INFO @ Mon, 03 Jun 2019 10:10:17: 35000000 INFO @ Mon, 03 Jun 2019 10:10:25: 35000000 INFO @ Mon, 03 Jun 2019 10:10:25: 36000000 INFO @ Mon, 03 Jun 2019 10:10:37: 36000000 INFO @ Mon, 03 Jun 2019 10:10:37: 37000000 INFO @ Mon, 03 Jun 2019 10:10:44: #1 tag size is determined as 100 bps INFO @ Mon, 03 Jun 2019 10:10:44: #1 tag size = 100 INFO @ Mon, 03 Jun 2019 10:10:44: #1 total tags in treatment: 14264373 INFO @ Mon, 03 Jun 2019 10:10:44: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 10:10:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 10:10:44: #1 tags after filtering in treatment: 12147671 INFO @ Mon, 03 Jun 2019 10:10:44: #1 Redundant rate of treatment: 0.15 INFO @ Mon, 03 Jun 2019 10:10:44: #1 finished! INFO @ Mon, 03 Jun 2019 10:10:44: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 10:10:44: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 10:10:45: #2 number of paired peaks: 664 WARNING @ Mon, 03 Jun 2019 10:10:45: Fewer paired peaks (664) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 664 pairs to build model! INFO @ Mon, 03 Jun 2019 10:10:45: start model_add_line... INFO @ Mon, 03 Jun 2019 10:10:46: start X-correlation... INFO @ Mon, 03 Jun 2019 10:10:46: end of X-cor INFO @ Mon, 03 Jun 2019 10:10:46: #2 finished! INFO @ Mon, 03 Jun 2019 10:10:46: #2 predicted fragment length is 215 bps INFO @ Mon, 03 Jun 2019 10:10:46: #2 alternative fragment length(s) may be 215 bps INFO @ Mon, 03 Jun 2019 10:10:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05_model.r INFO @ Mon, 03 Jun 2019 10:10:46: #3 Call peaks... INFO @ Mon, 03 Jun 2019 10:10:46: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 10:10:48: 37000000 INFO @ Mon, 03 Jun 2019 10:10:54: #1 tag size is determined as 100 bps INFO @ Mon, 03 Jun 2019 10:10:54: #1 tag size = 100 INFO @ Mon, 03 Jun 2019 10:10:54: #1 total tags in treatment: 14264373 INFO @ Mon, 03 Jun 2019 10:10:54: #1 user defined the maximum tags... INFO @ Mon, 03 Jun 2019 10:10:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 03 Jun 2019 10:10:54: #1 tags after filtering in treatment: 12147671 INFO @ Mon, 03 Jun 2019 10:10:54: #1 Redundant rate of treatment: 0.15 INFO @ Mon, 03 Jun 2019 10:10:54: #1 finished! INFO @ Mon, 03 Jun 2019 10:10:54: #2 Build Peak Model... INFO @ Mon, 03 Jun 2019 10:10:54: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 03 Jun 2019 10:10:55: #2 number of paired peaks: 664 WARNING @ Mon, 03 Jun 2019 10:10:55: Fewer paired peaks (664) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 664 pairs to build model! INFO @ Mon, 03 Jun 2019 10:10:55: start model_add_line... INFO @ Mon, 03 Jun 2019 10:10:55: start X-correlation... INFO @ Mon, 03 Jun 2019 10:10:55: end of X-cor INFO @ Mon, 03 Jun 2019 10:10:55: #2 finished! INFO @ Mon, 03 Jun 2019 10:10:55: #2 predicted fragment length is 215 bps INFO @ Mon, 03 Jun 2019 10:10:55: #2 alternative fragment length(s) may be 215 bps INFO @ Mon, 03 Jun 2019 10:10:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20_model.r INFO @ Mon, 03 Jun 2019 10:10:55: #3 Call peaks... INFO @ Mon, 03 Jun 2019 10:10:55: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 03 Jun 2019 10:11:22: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 10:11:31: #3 Call peaks for each chromosome... INFO @ Mon, 03 Jun 2019 10:11:39: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05_peaks.xls INFO @ Mon, 03 Jun 2019 10:11:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 10:11:39: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.05_summits.bed INFO @ Mon, 03 Jun 2019 10:11:39: Done! pass1 - making usageList (15 chroms): 3 millis pass2 - checking and writing primary data (7335 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Mon, 03 Jun 2019 10:11:48: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20_peaks.xls INFO @ Mon, 03 Jun 2019 10:11:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20_peaks.narrowPeak INFO @ Mon, 03 Jun 2019 10:11:49: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX1134694/SRX1134694.20_summits.bed INFO @ Mon, 03 Jun 2019 10:11:49: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (2877 records, 4 fields): 5 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。