Job ID = 16439414 SRX = SRX11245077 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T06:05:54 prefetch.2.10.7: 1) Downloading 'SRR14932342'... 2022-08-02T06:05:54 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T06:07:07 prefetch.2.10.7: HTTPS download succeed 2022-08-02T06:07:07 prefetch.2.10.7: 1) 'SRR14932342' was downloaded successfully 2022-08-02T06:07:07 prefetch.2.10.7: 'SRR14932342' has 0 unresolved dependencies Read 30088513 spots for SRR14932342/SRR14932342.sra Written 30088513 spots for SRR14932342/SRR14932342.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440967 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 03:01:58 30088513 reads; of these: 30088513 (100.00%) were paired; of these: 7962555 (26.46%) aligned concordantly 0 times 15960000 (53.04%) aligned concordantly exactly 1 time 6165958 (20.49%) aligned concordantly >1 times ---- 7962555 pairs aligned concordantly 0 times; of these: 2994886 (37.61%) aligned discordantly 1 time ---- 4967669 pairs aligned 0 times concordantly or discordantly; of these: 9935338 mates make up the pairs; of these: 6829658 (68.74%) aligned 0 times 822344 (8.28%) aligned exactly 1 time 2283336 (22.98%) aligned >1 times 88.65% overall alignment rate Time searching: 03:02:00 Overall time: 03:02:00 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 7815753 / 25014692 = 0.3124 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:41:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:41:42: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:41:42: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:41:58: 1000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:42:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:42:12: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:42:12: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:42:13: 2000000 INFO @ Tue, 02 Aug 2022 18:42:26: 1000000 INFO @ Tue, 02 Aug 2022 18:42:29: 3000000 INFO @ Tue, 02 Aug 2022 18:42:38: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 18:42:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 18:42:42: #1 read tag files... INFO @ Tue, 02 Aug 2022 18:42:42: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 18:42:46: 4000000 INFO @ Tue, 02 Aug 2022 18:42:52: 3000000 INFO @ Tue, 02 Aug 2022 18:42:56: 1000000 INFO @ Tue, 02 Aug 2022 18:43:03: 5000000 INFO @ Tue, 02 Aug 2022 18:43:04: 4000000 INFO @ Tue, 02 Aug 2022 18:43:09: 2000000 INFO @ Tue, 02 Aug 2022 18:43:17: 5000000 INFO @ Tue, 02 Aug 2022 18:43:20: 6000000 INFO @ Tue, 02 Aug 2022 18:43:21: 3000000 INFO @ Tue, 02 Aug 2022 18:43:29: 6000000 INFO @ Tue, 02 Aug 2022 18:43:32: 4000000 INFO @ Tue, 02 Aug 2022 18:43:37: 7000000 INFO @ Tue, 02 Aug 2022 18:43:42: 7000000 INFO @ Tue, 02 Aug 2022 18:43:44: 5000000 INFO @ Tue, 02 Aug 2022 18:43:55: 8000000 INFO @ Tue, 02 Aug 2022 18:43:55: 8000000 INFO @ Tue, 02 Aug 2022 18:43:56: 6000000 INFO @ Tue, 02 Aug 2022 18:44:07: 7000000 INFO @ Tue, 02 Aug 2022 18:44:08: 9000000 INFO @ Tue, 02 Aug 2022 18:44:12: 9000000 INFO @ Tue, 02 Aug 2022 18:44:19: 8000000 INFO @ Tue, 02 Aug 2022 18:44:21: 10000000 INFO @ Tue, 02 Aug 2022 18:44:30: 10000000 INFO @ Tue, 02 Aug 2022 18:44:30: 9000000 INFO @ Tue, 02 Aug 2022 18:44:34: 11000000 INFO @ Tue, 02 Aug 2022 18:44:41: 10000000 INFO @ Tue, 02 Aug 2022 18:44:45: 12000000 INFO @ Tue, 02 Aug 2022 18:44:46: 11000000 INFO @ Tue, 02 Aug 2022 18:44:52: 11000000 INFO @ Tue, 02 Aug 2022 18:44:57: 13000000 INFO @ Tue, 02 Aug 2022 18:45:01: 12000000 INFO @ Tue, 02 Aug 2022 18:45:03: 12000000 INFO @ Tue, 02 Aug 2022 18:45:09: 14000000 INFO @ Tue, 02 Aug 2022 18:45:14: 13000000 INFO @ Tue, 02 Aug 2022 18:45:16: 13000000 INFO @ Tue, 02 Aug 2022 18:45:21: 15000000 INFO @ Tue, 02 Aug 2022 18:45:25: 14000000 INFO @ Tue, 02 Aug 2022 18:45:31: 14000000 INFO @ Tue, 02 Aug 2022 18:45:33: 16000000 INFO @ Tue, 02 Aug 2022 18:45:35: 15000000 INFO @ Tue, 02 Aug 2022 18:45:45: 17000000 INFO @ Tue, 02 Aug 2022 18:45:47: 15000000 INFO @ Tue, 02 Aug 2022 18:45:48: 16000000 INFO @ Tue, 02 Aug 2022 18:45:56: 18000000 INFO @ Tue, 02 Aug 2022 18:45:59: 17000000 INFO @ Tue, 02 Aug 2022 18:46:03: 16000000 INFO @ Tue, 02 Aug 2022 18:46:08: 19000000 INFO @ Tue, 02 Aug 2022 18:46:10: 18000000 INFO @ Tue, 02 Aug 2022 18:46:17: 17000000 INFO @ Tue, 02 Aug 2022 18:46:20: 20000000 INFO @ Tue, 02 Aug 2022 18:46:21: 19000000 INFO @ Tue, 02 Aug 2022 18:46:31: 21000000 INFO @ Tue, 02 Aug 2022 18:46:32: 18000000 INFO @ Tue, 02 Aug 2022 18:46:32: 20000000 INFO @ Tue, 02 Aug 2022 18:46:42: 22000000 INFO @ Tue, 02 Aug 2022 18:46:44: 21000000 INFO @ Tue, 02 Aug 2022 18:46:47: 19000000 INFO @ Tue, 02 Aug 2022 18:46:54: 23000000 INFO @ Tue, 02 Aug 2022 18:46:55: 22000000 INFO @ Tue, 02 Aug 2022 18:47:02: 20000000 INFO @ Tue, 02 Aug 2022 18:47:06: 24000000 INFO @ Tue, 02 Aug 2022 18:47:08: 23000000 INFO @ Tue, 02 Aug 2022 18:47:16: 21000000 INFO @ Tue, 02 Aug 2022 18:47:17: 25000000 INFO @ Tue, 02 Aug 2022 18:47:19: 24000000 INFO @ Tue, 02 Aug 2022 18:47:29: 26000000 INFO @ Tue, 02 Aug 2022 18:47:29: 25000000 INFO @ Tue, 02 Aug 2022 18:47:30: 22000000 INFO @ Tue, 02 Aug 2022 18:47:39: 26000000 INFO @ Tue, 02 Aug 2022 18:47:41: 27000000 INFO @ Tue, 02 Aug 2022 18:47:45: 23000000 INFO @ Tue, 02 Aug 2022 18:47:50: 27000000 INFO @ Tue, 02 Aug 2022 18:47:52: 28000000 INFO @ Tue, 02 Aug 2022 18:48:00: 24000000 INFO @ Tue, 02 Aug 2022 18:48:02: 28000000 INFO @ Tue, 02 Aug 2022 18:48:04: 29000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 18:48:13: 29000000 INFO @ Tue, 02 Aug 2022 18:48:15: 30000000 INFO @ Tue, 02 Aug 2022 18:48:15: 25000000 INFO @ Tue, 02 Aug 2022 18:48:25: 30000000 INFO @ Tue, 02 Aug 2022 18:48:26: 31000000 INFO @ Tue, 02 Aug 2022 18:48:30: 26000000 INFO @ Tue, 02 Aug 2022 18:48:37: 32000000 INFO @ Tue, 02 Aug 2022 18:48:37: 31000000 INFO @ Tue, 02 Aug 2022 18:48:46: 27000000 INFO @ Tue, 02 Aug 2022 18:48:49: 33000000 INFO @ Tue, 02 Aug 2022 18:48:49: 32000000 INFO @ Tue, 02 Aug 2022 18:49:02: 34000000 INFO @ Tue, 02 Aug 2022 18:49:02: 28000000 INFO @ Tue, 02 Aug 2022 18:49:03: 33000000 INFO @ Tue, 02 Aug 2022 18:49:14: 35000000 INFO @ Tue, 02 Aug 2022 18:49:16: 29000000 INFO @ Tue, 02 Aug 2022 18:49:17: 34000000 INFO @ Tue, 02 Aug 2022 18:49:25: 36000000 INFO @ Tue, 02 Aug 2022 18:49:29: 35000000 INFO @ Tue, 02 Aug 2022 18:49:30: 30000000 INFO @ Tue, 02 Aug 2022 18:49:36: 37000000 INFO @ Tue, 02 Aug 2022 18:49:42: 36000000 INFO @ Tue, 02 Aug 2022 18:49:43: 31000000 INFO @ Tue, 02 Aug 2022 18:49:44: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 18:49:44: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 18:49:44: #1 total tags in treatment: 15274355 INFO @ Tue, 02 Aug 2022 18:49:44: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:49:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:49:45: #1 tags after filtering in treatment: 14146650 INFO @ Tue, 02 Aug 2022 18:49:45: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 18:49:45: #1 finished! INFO @ Tue, 02 Aug 2022 18:49:45: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:49:45: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:49:46: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 18:49:46: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 18:49:46: start model_add_line... INFO @ Tue, 02 Aug 2022 18:49:46: start X-correlation... INFO @ Tue, 02 Aug 2022 18:49:46: end of X-cor INFO @ Tue, 02 Aug 2022 18:49:46: #2 finished! INFO @ Tue, 02 Aug 2022 18:49:46: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 18:49:46: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 18:49:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10_model.r WARNING @ Tue, 02 Aug 2022 18:49:46: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:49:46: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 18:49:46: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:49:46: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:49:46: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 18:49:54: 37000000 INFO @ Tue, 02 Aug 2022 18:49:56: 32000000 INFO @ Tue, 02 Aug 2022 18:50:03: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 18:50:03: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 18:50:03: #1 total tags in treatment: 15274355 INFO @ Tue, 02 Aug 2022 18:50:03: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:50:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:50:04: #1 tags after filtering in treatment: 14146650 INFO @ Tue, 02 Aug 2022 18:50:04: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 18:50:04: #1 finished! INFO @ Tue, 02 Aug 2022 18:50:04: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:50:04: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:50:05: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 18:50:05: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 18:50:05: start model_add_line... INFO @ Tue, 02 Aug 2022 18:50:05: start X-correlation... INFO @ Tue, 02 Aug 2022 18:50:05: end of X-cor INFO @ Tue, 02 Aug 2022 18:50:05: #2 finished! INFO @ Tue, 02 Aug 2022 18:50:05: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 18:50:05: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 18:50:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20_model.r WARNING @ Tue, 02 Aug 2022 18:50:05: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:50:05: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 18:50:05: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:50:05: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:50:05: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:50:11: 33000000 INFO @ Tue, 02 Aug 2022 18:50:25: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:50:26: 34000000 INFO @ Tue, 02 Aug 2022 18:50:40: 35000000 INFO @ Tue, 02 Aug 2022 18:50:44: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:50:48: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10_peaks.xls INFO @ Tue, 02 Aug 2022 18:50:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:50:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.10_summits.bed INFO @ Tue, 02 Aug 2022 18:50:48: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (2943 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:50:54: 36000000 INFO @ Tue, 02 Aug 2022 18:51:06: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20_peaks.xls INFO @ Tue, 02 Aug 2022 18:51:06: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:51:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.20_summits.bed INFO @ Tue, 02 Aug 2022 18:51:06: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1208 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 18:51:09: 37000000 INFO @ Tue, 02 Aug 2022 18:51:18: #1 tag size is determined as 150 bps INFO @ Tue, 02 Aug 2022 18:51:18: #1 tag size = 150 INFO @ Tue, 02 Aug 2022 18:51:18: #1 total tags in treatment: 15274355 INFO @ Tue, 02 Aug 2022 18:51:18: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 18:51:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 18:51:19: #1 tags after filtering in treatment: 14146650 INFO @ Tue, 02 Aug 2022 18:51:19: #1 Redundant rate of treatment: 0.07 INFO @ Tue, 02 Aug 2022 18:51:19: #1 finished! INFO @ Tue, 02 Aug 2022 18:51:19: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 18:51:19: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 18:51:20: #2 number of paired peaks: 179 WARNING @ Tue, 02 Aug 2022 18:51:20: Fewer paired peaks (179) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 179 pairs to build model! INFO @ Tue, 02 Aug 2022 18:51:20: start model_add_line... INFO @ Tue, 02 Aug 2022 18:51:20: start X-correlation... INFO @ Tue, 02 Aug 2022 18:51:20: end of X-cor INFO @ Tue, 02 Aug 2022 18:51:20: #2 finished! INFO @ Tue, 02 Aug 2022 18:51:20: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 18:51:20: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 18:51:20: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05_model.r WARNING @ Tue, 02 Aug 2022 18:51:20: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 18:51:20: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 18:51:20: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 18:51:20: #3 Call peaks... INFO @ Tue, 02 Aug 2022 18:51:20: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 18:51:59: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 18:52:21: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05_peaks.xls INFO @ Tue, 02 Aug 2022 18:52:21: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 18:52:21: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX11245077/SRX11245077.05_summits.bed INFO @ Tue, 02 Aug 2022 18:52:21: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (5673 records, 4 fields): 18 millis CompletedMACS2peakCalling