Job ID = 14167102 SRX = SRX10412064 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 36125610 spots for SRR14035699/SRR14035699.sra Written 36125610 spots for SRR14035699/SRR14035699.sra fastq に変換しました。 bowtie でマッピング中... Your job 14168293 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 03:27:32 36125610 reads; of these: 36125610 (100.00%) were paired; of these: 3805675 (10.53%) aligned concordantly 0 times 23680012 (65.55%) aligned concordantly exactly 1 time 8639923 (23.92%) aligned concordantly >1 times ---- 3805675 pairs aligned concordantly 0 times; of these: 625922 (16.45%) aligned discordantly 1 time ---- 3179753 pairs aligned 0 times concordantly or discordantly; of these: 6359506 mates make up the pairs; of these: 4717685 (74.18%) aligned 0 times 634403 (9.98%) aligned exactly 1 time 1007418 (15.84%) aligned >1 times 93.47% overall alignment rate Time searching: 03:27:32 Overall time: 03:27:32 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 7776959 / 32884336 = 0.2365 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 14:06:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 14:06:20: #1 read tag files... INFO @ Fri, 10 Dec 2021 14:06:20: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 14:06:32: 1000000 INFO @ Fri, 10 Dec 2021 14:06:45: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 14:06:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 14:06:50: #1 read tag files... INFO @ Fri, 10 Dec 2021 14:06:50: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 14:06:59: 3000000 INFO @ Fri, 10 Dec 2021 14:07:06: 1000000 INFO @ Fri, 10 Dec 2021 14:07:16: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 14:07:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 14:07:20: #1 read tag files... INFO @ Fri, 10 Dec 2021 14:07:20: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 14:07:23: 2000000 INFO @ Fri, 10 Dec 2021 14:07:34: 5000000 INFO @ Fri, 10 Dec 2021 14:07:39: 1000000 INFO @ Fri, 10 Dec 2021 14:07:40: 3000000 INFO @ Fri, 10 Dec 2021 14:07:53: 6000000 INFO @ Fri, 10 Dec 2021 14:07:58: 2000000 INFO @ Fri, 10 Dec 2021 14:08:00: 4000000 INFO @ Fri, 10 Dec 2021 14:08:12: 7000000 INFO @ Fri, 10 Dec 2021 14:08:17: 3000000 INFO @ Fri, 10 Dec 2021 14:08:19: 5000000 INFO @ Fri, 10 Dec 2021 14:08:31: 8000000 INFO @ Fri, 10 Dec 2021 14:08:36: 4000000 INFO @ Fri, 10 Dec 2021 14:08:36: 6000000 INFO @ Fri, 10 Dec 2021 14:08:49: 9000000 INFO @ Fri, 10 Dec 2021 14:08:54: 5000000 INFO @ Fri, 10 Dec 2021 14:08:54: 7000000 INFO @ Fri, 10 Dec 2021 14:09:07: 10000000 INFO @ Fri, 10 Dec 2021 14:09:12: 6000000 INFO @ Fri, 10 Dec 2021 14:09:13: 8000000 INFO @ Fri, 10 Dec 2021 14:09:24: 11000000 INFO @ Fri, 10 Dec 2021 14:09:31: 7000000 INFO @ Fri, 10 Dec 2021 14:09:33: 9000000 INFO @ Fri, 10 Dec 2021 14:09:42: 12000000 INFO @ Fri, 10 Dec 2021 14:09:51: 8000000 INFO @ Fri, 10 Dec 2021 14:09:51: 10000000 INFO @ Fri, 10 Dec 2021 14:10:01: 13000000 INFO @ Fri, 10 Dec 2021 14:10:08: 11000000 INFO @ Fri, 10 Dec 2021 14:10:10: 9000000 INFO @ Fri, 10 Dec 2021 14:10:22: 14000000 INFO @ Fri, 10 Dec 2021 14:10:27: 12000000 INFO @ Fri, 10 Dec 2021 14:10:29: 10000000 INFO @ Fri, 10 Dec 2021 14:10:40: 15000000 INFO @ Fri, 10 Dec 2021 14:10:45: 13000000 INFO @ Fri, 10 Dec 2021 14:10:47: 11000000 INFO @ Fri, 10 Dec 2021 14:10:58: 16000000 INFO @ Fri, 10 Dec 2021 14:11:03: 14000000 INFO @ Fri, 10 Dec 2021 14:11:04: 12000000 INFO @ Fri, 10 Dec 2021 14:11:15: 17000000 INFO @ Fri, 10 Dec 2021 14:11:18: 15000000 INFO @ Fri, 10 Dec 2021 14:11:22: 13000000 INFO @ Fri, 10 Dec 2021 14:11:33: 18000000 INFO @ Fri, 10 Dec 2021 14:11:34: 16000000 INFO @ Fri, 10 Dec 2021 14:11:39: 14000000 INFO @ Fri, 10 Dec 2021 14:11:51: 17000000 INFO @ Fri, 10 Dec 2021 14:11:52: 19000000 INFO @ Fri, 10 Dec 2021 14:11:56: 15000000 INFO @ Fri, 10 Dec 2021 14:12:10: 18000000 INFO @ Fri, 10 Dec 2021 14:12:10: 20000000 INFO @ Fri, 10 Dec 2021 14:12:13: 16000000 INFO @ Fri, 10 Dec 2021 14:12:27: 21000000 INFO @ Fri, 10 Dec 2021 14:12:29: 19000000 INFO @ Fri, 10 Dec 2021 14:12:31: 17000000 INFO @ Fri, 10 Dec 2021 14:12:43: 22000000 INFO @ Fri, 10 Dec 2021 14:12:46: 20000000 INFO @ Fri, 10 Dec 2021 14:12:49: 18000000 INFO @ Fri, 10 Dec 2021 14:12:59: 23000000 INFO @ Fri, 10 Dec 2021 14:13:05: 21000000 INFO @ Fri, 10 Dec 2021 14:13:07: 19000000 INFO @ Fri, 10 Dec 2021 14:13:15: 24000000 INFO @ Fri, 10 Dec 2021 14:13:21: 22000000 INFO @ Fri, 10 Dec 2021 14:13:25: 20000000 INFO @ Fri, 10 Dec 2021 14:13:33: 25000000 INFO @ Fri, 10 Dec 2021 14:13:38: 23000000 INFO @ Fri, 10 Dec 2021 14:13:43: 21000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 14:13:49: 26000000 INFO @ Fri, 10 Dec 2021 14:13:56: 24000000 INFO @ Fri, 10 Dec 2021 14:14:01: 22000000 INFO @ Fri, 10 Dec 2021 14:14:05: 27000000 INFO @ Fri, 10 Dec 2021 14:14:13: 25000000 INFO @ Fri, 10 Dec 2021 14:14:18: 23000000 INFO @ Fri, 10 Dec 2021 14:14:22: 28000000 INFO @ Fri, 10 Dec 2021 14:14:29: 26000000 INFO @ Fri, 10 Dec 2021 14:14:35: 24000000 INFO @ Fri, 10 Dec 2021 14:14:40: 29000000 INFO @ Fri, 10 Dec 2021 14:14:45: 27000000 INFO @ Fri, 10 Dec 2021 14:14:52: 25000000 INFO @ Fri, 10 Dec 2021 14:14:56: 30000000 INFO @ Fri, 10 Dec 2021 14:15:02: 28000000 INFO @ Fri, 10 Dec 2021 14:15:10: 26000000 INFO @ Fri, 10 Dec 2021 14:15:12: 31000000 INFO @ Fri, 10 Dec 2021 14:15:20: 29000000 INFO @ Fri, 10 Dec 2021 14:15:27: 27000000 INFO @ Fri, 10 Dec 2021 14:15:28: 32000000 INFO @ Fri, 10 Dec 2021 14:15:36: 30000000 INFO @ Fri, 10 Dec 2021 14:15:44: 33000000 INFO @ Fri, 10 Dec 2021 14:15:45: 28000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 14:15:52: 31000000 INFO @ Fri, 10 Dec 2021 14:16:00: 34000000 INFO @ Fri, 10 Dec 2021 14:16:00: 29000000 INFO @ Fri, 10 Dec 2021 14:16:09: 32000000 INFO @ Fri, 10 Dec 2021 14:16:16: 35000000 INFO @ Fri, 10 Dec 2021 14:16:16: 30000000 INFO @ Fri, 10 Dec 2021 14:16:24: 33000000 INFO @ Fri, 10 Dec 2021 14:16:31: 36000000 INFO @ Fri, 10 Dec 2021 14:16:32: 31000000 INFO @ Fri, 10 Dec 2021 14:16:39: 34000000 INFO @ Fri, 10 Dec 2021 14:16:47: 37000000 INFO @ Fri, 10 Dec 2021 14:16:50: 32000000 INFO @ Fri, 10 Dec 2021 14:16:54: 35000000 INFO @ Fri, 10 Dec 2021 14:17:01: 38000000 INFO @ Fri, 10 Dec 2021 14:17:05: 33000000 INFO @ Fri, 10 Dec 2021 14:17:08: 36000000 INFO @ Fri, 10 Dec 2021 14:17:17: 39000000 INFO @ Fri, 10 Dec 2021 14:17:21: 34000000 INFO @ Fri, 10 Dec 2021 14:17:22: 37000000 INFO @ Fri, 10 Dec 2021 14:17:32: 40000000 INFO @ Fri, 10 Dec 2021 14:17:33: 35000000 INFO @ Fri, 10 Dec 2021 14:17:37: 38000000 INFO @ Fri, 10 Dec 2021 14:17:45: 41000000 INFO @ Fri, 10 Dec 2021 14:17:48: 36000000 INFO @ Fri, 10 Dec 2021 14:17:52: 39000000 INFO @ Fri, 10 Dec 2021 14:17:58: 42000000 INFO @ Fri, 10 Dec 2021 14:18:02: 37000000 INFO @ Fri, 10 Dec 2021 14:18:06: 40000000 INFO @ Fri, 10 Dec 2021 14:18:13: 43000000 INFO @ Fri, 10 Dec 2021 14:18:15: 38000000 INFO @ Fri, 10 Dec 2021 14:18:20: 41000000 INFO @ Fri, 10 Dec 2021 14:18:27: 44000000 INFO @ Fri, 10 Dec 2021 14:18:30: 39000000 INFO @ Fri, 10 Dec 2021 14:18:33: 42000000 INFO @ Fri, 10 Dec 2021 14:18:42: 45000000 INFO @ Fri, 10 Dec 2021 14:18:43: 40000000 INFO @ Fri, 10 Dec 2021 14:18:48: 43000000 INFO @ Fri, 10 Dec 2021 14:18:55: 41000000 INFO @ Fri, 10 Dec 2021 14:18:57: 46000000 INFO @ Fri, 10 Dec 2021 14:19:03: 44000000 INFO @ Fri, 10 Dec 2021 14:19:10: 42000000 INFO @ Fri, 10 Dec 2021 14:19:11: 47000000 INFO @ Fri, 10 Dec 2021 14:19:19: 45000000 INFO @ Fri, 10 Dec 2021 14:19:25: 43000000 INFO @ Fri, 10 Dec 2021 14:19:25: 48000000 INFO @ Fri, 10 Dec 2021 14:19:33: 46000000 INFO @ Fri, 10 Dec 2021 14:19:39: 44000000 INFO @ Fri, 10 Dec 2021 14:19:40: 49000000 INFO @ Fri, 10 Dec 2021 14:19:47: 47000000 INFO @ Fri, 10 Dec 2021 14:19:53: 45000000 INFO @ Fri, 10 Dec 2021 14:19:54: 50000000 INFO @ Fri, 10 Dec 2021 14:20:03: 48000000 INFO @ Fri, 10 Dec 2021 14:20:07: 51000000 INFO @ Fri, 10 Dec 2021 14:20:08: 46000000 INFO @ Fri, 10 Dec 2021 14:20:18: 49000000 INFO @ Fri, 10 Dec 2021 14:20:22: 47000000 INFO @ Fri, 10 Dec 2021 14:20:22: #1 tag size is determined as 150 bps INFO @ Fri, 10 Dec 2021 14:20:22: #1 tag size = 150 INFO @ Fri, 10 Dec 2021 14:20:22: #1 total tags in treatment: 24649277 INFO @ Fri, 10 Dec 2021 14:20:22: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 14:20:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 14:20:22: #1 tags after filtering in treatment: 22225010 INFO @ Fri, 10 Dec 2021 14:20:22: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 14:20:22: #1 finished! INFO @ Fri, 10 Dec 2021 14:20:22: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 14:20:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 14:20:24: #2 number of paired peaks: 143 WARNING @ Fri, 10 Dec 2021 14:20:24: Fewer paired peaks (143) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 143 pairs to build model! INFO @ Fri, 10 Dec 2021 14:20:24: start model_add_line... INFO @ Fri, 10 Dec 2021 14:20:24: start X-correlation... INFO @ Fri, 10 Dec 2021 14:20:24: end of X-cor INFO @ Fri, 10 Dec 2021 14:20:24: #2 finished! INFO @ Fri, 10 Dec 2021 14:20:24: #2 predicted fragment length is 239 bps INFO @ Fri, 10 Dec 2021 14:20:24: #2 alternative fragment length(s) may be 239 bps INFO @ Fri, 10 Dec 2021 14:20:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05_model.r WARNING @ Fri, 10 Dec 2021 14:20:24: #2 Since the d (239) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 14:20:24: #2 You may need to consider one of the other alternative d(s): 239 WARNING @ Fri, 10 Dec 2021 14:20:24: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 14:20:24: #3 Call peaks... INFO @ Fri, 10 Dec 2021 14:20:24: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 14:20:30: 50000000 INFO @ Fri, 10 Dec 2021 14:20:34: 48000000 INFO @ Fri, 10 Dec 2021 14:20:43: 51000000 INFO @ Fri, 10 Dec 2021 14:20:47: 49000000 INFO @ Fri, 10 Dec 2021 14:20:55: #1 tag size is determined as 150 bps INFO @ Fri, 10 Dec 2021 14:20:55: #1 tag size = 150 INFO @ Fri, 10 Dec 2021 14:20:55: #1 total tags in treatment: 24649277 INFO @ Fri, 10 Dec 2021 14:20:55: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 14:20:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 14:20:56: #1 tags after filtering in treatment: 22225010 INFO @ Fri, 10 Dec 2021 14:20:56: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 14:20:56: #1 finished! INFO @ Fri, 10 Dec 2021 14:20:56: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 14:20:56: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 14:20:58: #2 number of paired peaks: 143 WARNING @ Fri, 10 Dec 2021 14:20:58: Fewer paired peaks (143) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 143 pairs to build model! INFO @ Fri, 10 Dec 2021 14:20:58: start model_add_line... INFO @ Fri, 10 Dec 2021 14:20:58: start X-correlation... INFO @ Fri, 10 Dec 2021 14:20:58: end of X-cor INFO @ Fri, 10 Dec 2021 14:20:58: #2 finished! INFO @ Fri, 10 Dec 2021 14:20:58: #2 predicted fragment length is 239 bps INFO @ Fri, 10 Dec 2021 14:20:58: #2 alternative fragment length(s) may be 239 bps INFO @ Fri, 10 Dec 2021 14:20:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10_model.r WARNING @ Fri, 10 Dec 2021 14:20:58: #2 Since the d (239) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 14:20:58: #2 You may need to consider one of the other alternative d(s): 239 WARNING @ Fri, 10 Dec 2021 14:20:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 14:20:58: #3 Call peaks... INFO @ Fri, 10 Dec 2021 14:20:58: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 14:20:59: 50000000 INFO @ Fri, 10 Dec 2021 14:21:10: 51000000 INFO @ Fri, 10 Dec 2021 14:21:22: #1 tag size is determined as 150 bps INFO @ Fri, 10 Dec 2021 14:21:22: #1 tag size = 150 INFO @ Fri, 10 Dec 2021 14:21:22: #1 total tags in treatment: 24649277 INFO @ Fri, 10 Dec 2021 14:21:22: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 14:21:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 14:21:22: #1 tags after filtering in treatment: 22225010 INFO @ Fri, 10 Dec 2021 14:21:22: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 14:21:22: #1 finished! INFO @ Fri, 10 Dec 2021 14:21:22: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 14:21:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 14:21:24: #2 number of paired peaks: 143 WARNING @ Fri, 10 Dec 2021 14:21:24: Fewer paired peaks (143) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 143 pairs to build model! INFO @ Fri, 10 Dec 2021 14:21:24: start model_add_line... INFO @ Fri, 10 Dec 2021 14:21:24: start X-correlation... INFO @ Fri, 10 Dec 2021 14:21:24: end of X-cor INFO @ Fri, 10 Dec 2021 14:21:24: #2 finished! INFO @ Fri, 10 Dec 2021 14:21:24: #2 predicted fragment length is 239 bps INFO @ Fri, 10 Dec 2021 14:21:24: #2 alternative fragment length(s) may be 239 bps INFO @ Fri, 10 Dec 2021 14:21:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20_model.r WARNING @ Fri, 10 Dec 2021 14:21:24: #2 Since the d (239) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 14:21:24: #2 You may need to consider one of the other alternative d(s): 239 WARNING @ Fri, 10 Dec 2021 14:21:24: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 14:21:24: #3 Call peaks... INFO @ Fri, 10 Dec 2021 14:21:24: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 14:21:26: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 14:21:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05_peaks.xls INFO @ Fri, 10 Dec 2021 14:21:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 14:21:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.05_summits.bed INFO @ Fri, 10 Dec 2021 14:21:56: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (10619 records, 4 fields): 34 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 14:21:59: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 14:22:26: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 14:22:28: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10_peaks.xls INFO @ Fri, 10 Dec 2021 14:22:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 14:22:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.10_summits.bed INFO @ Fri, 10 Dec 2021 14:22:29: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (7664 records, 4 fields): 12 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 14:22:54: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20_peaks.xls INFO @ Fri, 10 Dec 2021 14:22:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 14:22:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10412064/SRX10412064.20_summits.bed INFO @ Fri, 10 Dec 2021 14:22:55: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (4195 records, 4 fields): 10 millis CompletedMACS2peakCalling