Job ID = 14172027 SRX = SRX10089740 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 37032597 spots for SRR13700627/SRR13700627.sra Written 37032597 spots for SRR13700627/SRR13700627.sra fastq に変換しました。 bowtie でマッピング中... Your job 14172578 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:35:07 37032597 reads; of these: 37032597 (100.00%) were paired; of these: 12332977 (33.30%) aligned concordantly 0 times 18226435 (49.22%) aligned concordantly exactly 1 time 6473185 (17.48%) aligned concordantly >1 times ---- 12332977 pairs aligned concordantly 0 times; of these: 78483 (0.64%) aligned discordantly 1 time ---- 12254494 pairs aligned 0 times concordantly or discordantly; of these: 24508988 mates make up the pairs; of these: 14066232 (57.39%) aligned 0 times 8509089 (34.72%) aligned exactly 1 time 1933667 (7.89%) aligned >1 times 81.01% overall alignment rate Time searching: 00:35:07 Overall time: 00:35:07 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5400625 / 24371246 = 0.2216 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:41:08: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:41:08: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:41:08: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:41:13: 1000000 INFO @ Sat, 11 Dec 2021 14:41:18: 2000000 INFO @ Sat, 11 Dec 2021 14:41:23: 3000000 INFO @ Sat, 11 Dec 2021 14:41:27: 4000000 INFO @ Sat, 11 Dec 2021 14:41:32: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:41:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:41:38: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:41:38: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:41:38: 6000000 INFO @ Sat, 11 Dec 2021 14:41:43: 1000000 INFO @ Sat, 11 Dec 2021 14:41:43: 7000000 INFO @ Sat, 11 Dec 2021 14:41:48: 2000000 INFO @ Sat, 11 Dec 2021 14:41:49: 8000000 INFO @ Sat, 11 Dec 2021 14:41:53: 3000000 INFO @ Sat, 11 Dec 2021 14:41:54: 9000000 INFO @ Sat, 11 Dec 2021 14:41:58: 4000000 INFO @ Sat, 11 Dec 2021 14:41:59: 10000000 INFO @ Sat, 11 Dec 2021 14:42:04: 5000000 INFO @ Sat, 11 Dec 2021 14:42:05: 11000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 14:42:08: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 14:42:08: #1 read tag files... INFO @ Sat, 11 Dec 2021 14:42:08: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 14:42:09: 6000000 INFO @ Sat, 11 Dec 2021 14:42:11: 12000000 INFO @ Sat, 11 Dec 2021 14:42:14: 1000000 INFO @ Sat, 11 Dec 2021 14:42:15: 7000000 INFO @ Sat, 11 Dec 2021 14:42:17: 13000000 INFO @ Sat, 11 Dec 2021 14:42:20: 2000000 INFO @ Sat, 11 Dec 2021 14:42:21: 8000000 INFO @ Sat, 11 Dec 2021 14:42:23: 14000000 INFO @ Sat, 11 Dec 2021 14:42:26: 3000000 INFO @ Sat, 11 Dec 2021 14:42:27: 9000000 INFO @ Sat, 11 Dec 2021 14:42:29: 15000000 INFO @ Sat, 11 Dec 2021 14:42:32: 4000000 INFO @ Sat, 11 Dec 2021 14:42:33: 10000000 INFO @ Sat, 11 Dec 2021 14:42:35: 16000000 INFO @ Sat, 11 Dec 2021 14:42:38: 5000000 INFO @ Sat, 11 Dec 2021 14:42:39: 11000000 INFO @ Sat, 11 Dec 2021 14:42:41: 17000000 INFO @ Sat, 11 Dec 2021 14:42:44: 6000000 INFO @ Sat, 11 Dec 2021 14:42:45: 12000000 INFO @ Sat, 11 Dec 2021 14:42:47: 18000000 INFO @ Sat, 11 Dec 2021 14:42:50: 7000000 INFO @ Sat, 11 Dec 2021 14:42:51: 13000000 INFO @ Sat, 11 Dec 2021 14:42:53: 19000000 INFO @ Sat, 11 Dec 2021 14:42:56: 8000000 INFO @ Sat, 11 Dec 2021 14:42:57: 14000000 INFO @ Sat, 11 Dec 2021 14:42:59: 20000000 INFO @ Sat, 11 Dec 2021 14:43:02: 9000000 INFO @ Sat, 11 Dec 2021 14:43:03: 15000000 INFO @ Sat, 11 Dec 2021 14:43:05: 21000000 INFO @ Sat, 11 Dec 2021 14:43:08: 10000000 INFO @ Sat, 11 Dec 2021 14:43:09: 16000000 INFO @ Sat, 11 Dec 2021 14:43:11: 22000000 INFO @ Sat, 11 Dec 2021 14:43:14: 11000000 INFO @ Sat, 11 Dec 2021 14:43:16: 17000000 INFO @ Sat, 11 Dec 2021 14:43:17: 23000000 INFO @ Sat, 11 Dec 2021 14:43:20: 12000000 INFO @ Sat, 11 Dec 2021 14:43:22: 18000000 INFO @ Sat, 11 Dec 2021 14:43:23: 24000000 INFO @ Sat, 11 Dec 2021 14:43:26: 13000000 INFO @ Sat, 11 Dec 2021 14:43:28: 19000000 INFO @ Sat, 11 Dec 2021 14:43:29: 25000000 INFO @ Sat, 11 Dec 2021 14:43:31: 14000000 INFO @ Sat, 11 Dec 2021 14:43:34: 20000000 INFO @ Sat, 11 Dec 2021 14:43:35: 26000000 INFO @ Sat, 11 Dec 2021 14:43:37: 15000000 INFO @ Sat, 11 Dec 2021 14:43:40: 21000000 INFO @ Sat, 11 Dec 2021 14:43:41: 27000000 INFO @ Sat, 11 Dec 2021 14:43:43: 16000000 INFO @ Sat, 11 Dec 2021 14:43:46: 22000000 INFO @ Sat, 11 Dec 2021 14:43:47: 28000000 INFO @ Sat, 11 Dec 2021 14:43:49: 17000000 INFO @ Sat, 11 Dec 2021 14:43:52: 23000000 INFO @ Sat, 11 Dec 2021 14:43:53: 29000000 INFO @ Sat, 11 Dec 2021 14:43:55: 18000000 INFO @ Sat, 11 Dec 2021 14:43:58: 24000000 INFO @ Sat, 11 Dec 2021 14:43:59: 30000000 INFO @ Sat, 11 Dec 2021 14:44:01: 19000000 INFO @ Sat, 11 Dec 2021 14:44:04: 25000000 INFO @ Sat, 11 Dec 2021 14:44:05: 31000000 INFO @ Sat, 11 Dec 2021 14:44:07: 20000000 INFO @ Sat, 11 Dec 2021 14:44:10: 26000000 INFO @ Sat, 11 Dec 2021 14:44:11: 32000000 INFO @ Sat, 11 Dec 2021 14:44:13: 21000000 INFO @ Sat, 11 Dec 2021 14:44:16: 27000000 INFO @ Sat, 11 Dec 2021 14:44:17: 33000000 INFO @ Sat, 11 Dec 2021 14:44:19: 22000000 INFO @ Sat, 11 Dec 2021 14:44:22: 28000000 INFO @ Sat, 11 Dec 2021 14:44:23: 34000000 INFO @ Sat, 11 Dec 2021 14:44:25: 23000000 INFO @ Sat, 11 Dec 2021 14:44:28: 29000000 INFO @ Sat, 11 Dec 2021 14:44:29: 35000000 INFO @ Sat, 11 Dec 2021 14:44:31: 24000000 INFO @ Sat, 11 Dec 2021 14:44:34: 30000000 INFO @ Sat, 11 Dec 2021 14:44:35: 36000000 INFO @ Sat, 11 Dec 2021 14:44:37: 25000000 INFO @ Sat, 11 Dec 2021 14:44:41: 31000000 INFO @ Sat, 11 Dec 2021 14:44:41: 37000000 INFO @ Sat, 11 Dec 2021 14:44:42: 26000000 INFO @ Sat, 11 Dec 2021 14:44:47: 32000000 INFO @ Sat, 11 Dec 2021 14:44:47: 38000000 INFO @ Sat, 11 Dec 2021 14:44:48: 27000000 INFO @ Sat, 11 Dec 2021 14:44:52: 33000000 INFO @ Sat, 11 Dec 2021 14:44:52: 39000000 INFO @ Sat, 11 Dec 2021 14:44:54: 28000000 INFO @ Sat, 11 Dec 2021 14:44:58: 40000000 INFO @ Sat, 11 Dec 2021 14:44:58: 34000000 INFO @ Sat, 11 Dec 2021 14:45:00: 29000000 INFO @ Sat, 11 Dec 2021 14:45:04: 41000000 INFO @ Sat, 11 Dec 2021 14:45:04: 35000000 INFO @ Sat, 11 Dec 2021 14:45:06: 30000000 INFO @ Sat, 11 Dec 2021 14:45:10: 36000000 INFO @ Sat, 11 Dec 2021 14:45:10: 42000000 INFO @ Sat, 11 Dec 2021 14:45:12: 31000000 INFO @ Sat, 11 Dec 2021 14:45:16: 37000000 INFO @ Sat, 11 Dec 2021 14:45:17: 43000000 INFO @ Sat, 11 Dec 2021 14:45:18: 32000000 INFO @ Sat, 11 Dec 2021 14:45:22: 38000000 INFO @ Sat, 11 Dec 2021 14:45:23: 44000000 INFO @ Sat, 11 Dec 2021 14:45:24: 33000000 INFO @ Sat, 11 Dec 2021 14:45:27: 39000000 INFO @ Sat, 11 Dec 2021 14:45:29: 45000000 INFO @ Sat, 11 Dec 2021 14:45:29: 34000000 INFO @ Sat, 11 Dec 2021 14:45:32: 40000000 INFO @ Sat, 11 Dec 2021 14:45:35: 46000000 INFO @ Sat, 11 Dec 2021 14:45:35: 35000000 INFO @ Sat, 11 Dec 2021 14:45:38: 41000000 INFO @ Sat, 11 Dec 2021 14:45:41: 47000000 INFO @ Sat, 11 Dec 2021 14:45:41: 36000000 INFO @ Sat, 11 Dec 2021 14:45:44: 42000000 INFO @ Sat, 11 Dec 2021 14:45:47: 48000000 INFO @ Sat, 11 Dec 2021 14:45:47: 37000000 INFO @ Sat, 11 Dec 2021 14:45:50: 43000000 INFO @ Sat, 11 Dec 2021 14:45:52: 49000000 INFO @ Sat, 11 Dec 2021 14:45:53: 38000000 INFO @ Sat, 11 Dec 2021 14:45:54: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:45:54: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:45:54: #1 total tags in treatment: 19300792 INFO @ Sat, 11 Dec 2021 14:45:54: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:45:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:45:54: #1 tags after filtering in treatment: 13077532 INFO @ Sat, 11 Dec 2021 14:45:54: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 11 Dec 2021 14:45:54: #1 finished! INFO @ Sat, 11 Dec 2021 14:45:54: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:45:54: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:45:55: #2 number of paired peaks: 1351 INFO @ Sat, 11 Dec 2021 14:45:55: start model_add_line... INFO @ Sat, 11 Dec 2021 14:45:55: start X-correlation... INFO @ Sat, 11 Dec 2021 14:45:55: end of X-cor INFO @ Sat, 11 Dec 2021 14:45:55: #2 finished! INFO @ Sat, 11 Dec 2021 14:45:55: #2 predicted fragment length is 64 bps INFO @ Sat, 11 Dec 2021 14:45:55: #2 alternative fragment length(s) may be 64 bps INFO @ Sat, 11 Dec 2021 14:45:55: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05_model.r WARNING @ Sat, 11 Dec 2021 14:45:55: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:45:55: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Sat, 11 Dec 2021 14:45:55: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:45:55: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:45:55: #3 Pre-compute pvalue-qvalue table... BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 14:45:56: 44000000 INFO @ Sat, 11 Dec 2021 14:45:58: 39000000 INFO @ Sat, 11 Dec 2021 14:46:01: 45000000 INFO @ Sat, 11 Dec 2021 14:46:03: 40000000 INFO @ Sat, 11 Dec 2021 14:46:07: 46000000 INFO @ Sat, 11 Dec 2021 14:46:09: 41000000 INFO @ Sat, 11 Dec 2021 14:46:13: 47000000 INFO @ Sat, 11 Dec 2021 14:46:15: 42000000 INFO @ Sat, 11 Dec 2021 14:46:18: 48000000 INFO @ Sat, 11 Dec 2021 14:46:21: 43000000 INFO @ Sat, 11 Dec 2021 14:46:21: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:46:24: 49000000 INFO @ Sat, 11 Dec 2021 14:46:25: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:46:25: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:46:25: #1 total tags in treatment: 19300792 INFO @ Sat, 11 Dec 2021 14:46:25: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:46:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:46:26: #1 tags after filtering in treatment: 13077532 INFO @ Sat, 11 Dec 2021 14:46:26: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 11 Dec 2021 14:46:26: #1 finished! INFO @ Sat, 11 Dec 2021 14:46:26: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:46:26: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:46:26: 44000000 INFO @ Sat, 11 Dec 2021 14:46:27: #2 number of paired peaks: 1351 INFO @ Sat, 11 Dec 2021 14:46:27: start model_add_line... INFO @ Sat, 11 Dec 2021 14:46:27: start X-correlation... INFO @ Sat, 11 Dec 2021 14:46:27: end of X-cor INFO @ Sat, 11 Dec 2021 14:46:27: #2 finished! INFO @ Sat, 11 Dec 2021 14:46:27: #2 predicted fragment length is 64 bps INFO @ Sat, 11 Dec 2021 14:46:27: #2 alternative fragment length(s) may be 64 bps INFO @ Sat, 11 Dec 2021 14:46:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10_model.r WARNING @ Sat, 11 Dec 2021 14:46:27: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:46:27: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Sat, 11 Dec 2021 14:46:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:46:27: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:46:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 14:46:31: 45000000 INFO @ Sat, 11 Dec 2021 14:46:36: 46000000 INFO @ Sat, 11 Dec 2021 14:46:37: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05_peaks.xls INFO @ Sat, 11 Dec 2021 14:46:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:46:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.05_summits.bed INFO @ Sat, 11 Dec 2021 14:46:37: Done! pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (19044 records, 4 fields): 23 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 14:46:41: 47000000 INFO @ Sat, 11 Dec 2021 14:46:46: 48000000 INFO @ Sat, 11 Dec 2021 14:46:51: 49000000 INFO @ Sat, 11 Dec 2021 14:46:52: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:46:52: #1 tag size is determined as 36 bps INFO @ Sat, 11 Dec 2021 14:46:52: #1 tag size = 36 INFO @ Sat, 11 Dec 2021 14:46:52: #1 total tags in treatment: 19300792 INFO @ Sat, 11 Dec 2021 14:46:52: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 14:46:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 14:46:53: #1 tags after filtering in treatment: 13077532 INFO @ Sat, 11 Dec 2021 14:46:53: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 11 Dec 2021 14:46:53: #1 finished! INFO @ Sat, 11 Dec 2021 14:46:53: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 14:46:53: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 14:46:54: #2 number of paired peaks: 1351 INFO @ Sat, 11 Dec 2021 14:46:54: start model_add_line... INFO @ Sat, 11 Dec 2021 14:46:54: start X-correlation... INFO @ Sat, 11 Dec 2021 14:46:54: end of X-cor INFO @ Sat, 11 Dec 2021 14:46:54: #2 finished! INFO @ Sat, 11 Dec 2021 14:46:54: #2 predicted fragment length is 64 bps INFO @ Sat, 11 Dec 2021 14:46:54: #2 alternative fragment length(s) may be 64 bps INFO @ Sat, 11 Dec 2021 14:46:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20_model.r WARNING @ Sat, 11 Dec 2021 14:46:54: #2 Since the d (64) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 14:46:54: #2 You may need to consider one of the other alternative d(s): 64 WARNING @ Sat, 11 Dec 2021 14:46:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 14:46:54: #3 Call peaks... INFO @ Sat, 11 Dec 2021 14:46:54: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 14:47:07: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10_peaks.xls INFO @ Sat, 11 Dec 2021 14:47:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:47:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.10_summits.bed INFO @ Sat, 11 Dec 2021 14:47:07: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10582 records, 4 fields): 19 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 14:47:20: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 14:47:34: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20_peaks.xls INFO @ Sat, 11 Dec 2021 14:47:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 14:47:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX10089740/SRX10089740.20_summits.bed INFO @ Sat, 11 Dec 2021 14:47:34: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (2457 records, 4 fields): 5 millis CompletedMACS2peakCalling