Job ID = 16439821 SRX = ERX5970267 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2022-08-02T07:15:39 prefetch.2.10.7: 1) Downloading 'ERR6338590'... 2022-08-02T07:15:39 prefetch.2.10.7: Downloading via HTTPS... 2022-08-02T07:19:11 prefetch.2.10.7: HTTPS download succeed 2022-08-02T07:19:11 prefetch.2.10.7: 1) 'ERR6338590' was downloaded successfully 2022-08-02T07:19:11 prefetch.2.10.7: 'ERR6338590' has 0 unresolved dependencies Read 25807883 spots for ERR6338590/ERR6338590.sra Written 25807883 spots for ERR6338590/ERR6338590.sra fastq に変換しました。 bowtie でマッピング中... Your job 16440107 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:41:40 25807883 reads; of these: 25807883 (100.00%) were paired; of these: 2956113 (11.45%) aligned concordantly 0 times 21655600 (83.91%) aligned concordantly exactly 1 time 1196170 (4.63%) aligned concordantly >1 times ---- 2956113 pairs aligned concordantly 0 times; of these: 1956206 (66.17%) aligned discordantly 1 time ---- 999907 pairs aligned 0 times concordantly or discordantly; of these: 1999814 mates make up the pairs; of these: 1147762 (57.39%) aligned 0 times 590908 (29.55%) aligned exactly 1 time 261144 (13.06%) aligned >1 times 97.78% overall alignment rate Time searching: 00:41:41 Overall time: 00:41:41 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1292056 / 20494455 = 0.0630 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:27:53: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:27:53: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:27:53: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:28:00: 1000000 INFO @ Tue, 02 Aug 2022 17:28:06: 2000000 INFO @ Tue, 02 Aug 2022 17:28:13: 3000000 INFO @ Tue, 02 Aug 2022 17:28:20: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:28:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:28:22: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:28:22: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:28:27: 5000000 INFO @ Tue, 02 Aug 2022 17:28:30: 1000000 INFO @ Tue, 02 Aug 2022 17:28:34: 6000000 INFO @ Tue, 02 Aug 2022 17:28:37: 2000000 INFO @ Tue, 02 Aug 2022 17:28:41: 7000000 INFO @ Tue, 02 Aug 2022 17:28:44: 3000000 INFO @ Tue, 02 Aug 2022 17:28:49: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.7/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 02 Aug 2022 17:28:51: 4000000 INFO @ Tue, 02 Aug 2022 17:28:53: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 02 Aug 2022 17:28:53: #1 read tag files... INFO @ Tue, 02 Aug 2022 17:28:53: #1 read treatment tags... INFO @ Tue, 02 Aug 2022 17:28:57: 9000000 INFO @ Tue, 02 Aug 2022 17:28:59: 5000000 INFO @ Tue, 02 Aug 2022 17:29:02: 1000000 INFO @ Tue, 02 Aug 2022 17:29:05: 10000000 INFO @ Tue, 02 Aug 2022 17:29:07: 6000000 INFO @ Tue, 02 Aug 2022 17:29:11: 2000000 INFO @ Tue, 02 Aug 2022 17:29:13: 11000000 INFO @ Tue, 02 Aug 2022 17:29:15: 7000000 INFO @ Tue, 02 Aug 2022 17:29:20: 3000000 INFO @ Tue, 02 Aug 2022 17:29:21: 12000000 INFO @ Tue, 02 Aug 2022 17:29:23: 8000000 INFO @ Tue, 02 Aug 2022 17:29:29: 4000000 INFO @ Tue, 02 Aug 2022 17:29:29: 13000000 INFO @ Tue, 02 Aug 2022 17:29:31: 9000000 INFO @ Tue, 02 Aug 2022 17:29:37: 5000000 INFO @ Tue, 02 Aug 2022 17:29:38: 14000000 INFO @ Tue, 02 Aug 2022 17:29:40: 10000000 INFO @ Tue, 02 Aug 2022 17:29:46: 6000000 INFO @ Tue, 02 Aug 2022 17:29:46: 15000000 INFO @ Tue, 02 Aug 2022 17:29:48: 11000000 INFO @ Tue, 02 Aug 2022 17:29:54: 16000000 INFO @ Tue, 02 Aug 2022 17:29:54: 7000000 INFO @ Tue, 02 Aug 2022 17:29:56: 12000000 INFO @ Tue, 02 Aug 2022 17:30:02: 17000000 INFO @ Tue, 02 Aug 2022 17:30:03: 8000000 INFO @ Tue, 02 Aug 2022 17:30:04: 13000000 INFO @ Tue, 02 Aug 2022 17:30:10: 18000000 INFO @ Tue, 02 Aug 2022 17:30:11: 9000000 INFO @ Tue, 02 Aug 2022 17:30:12: 14000000 INFO @ Tue, 02 Aug 2022 17:30:19: 19000000 INFO @ Tue, 02 Aug 2022 17:30:20: 10000000 INFO @ Tue, 02 Aug 2022 17:30:21: 15000000 INFO @ Tue, 02 Aug 2022 17:30:27: 20000000 INFO @ Tue, 02 Aug 2022 17:30:28: 11000000 INFO @ Tue, 02 Aug 2022 17:30:29: 16000000 INFO @ Tue, 02 Aug 2022 17:30:35: 21000000 INFO @ Tue, 02 Aug 2022 17:30:36: 12000000 INFO @ Tue, 02 Aug 2022 17:30:37: 17000000 INFO @ Tue, 02 Aug 2022 17:30:43: 22000000 INFO @ Tue, 02 Aug 2022 17:30:45: 18000000 INFO @ Tue, 02 Aug 2022 17:30:45: 13000000 INFO @ Tue, 02 Aug 2022 17:30:52: 23000000 INFO @ Tue, 02 Aug 2022 17:30:53: 19000000 INFO @ Tue, 02 Aug 2022 17:30:54: 14000000 INFO @ Tue, 02 Aug 2022 17:31:00: 24000000 INFO @ Tue, 02 Aug 2022 17:31:01: 20000000 INFO @ Tue, 02 Aug 2022 17:31:02: 15000000 INFO @ Tue, 02 Aug 2022 17:31:08: 25000000 INFO @ Tue, 02 Aug 2022 17:31:09: 21000000 INFO @ Tue, 02 Aug 2022 17:31:11: 16000000 INFO @ Tue, 02 Aug 2022 17:31:16: 26000000 INFO @ Tue, 02 Aug 2022 17:31:18: 22000000 INFO @ Tue, 02 Aug 2022 17:31:19: 17000000 INFO @ Tue, 02 Aug 2022 17:31:24: 27000000 INFO @ Tue, 02 Aug 2022 17:31:26: 23000000 INFO @ Tue, 02 Aug 2022 17:31:28: 18000000 INFO @ Tue, 02 Aug 2022 17:31:32: 28000000 INFO @ Tue, 02 Aug 2022 17:31:34: 24000000 INFO @ Tue, 02 Aug 2022 17:31:36: 19000000 INFO @ Tue, 02 Aug 2022 17:31:40: 29000000 INFO @ Tue, 02 Aug 2022 17:31:42: 25000000 INFO @ Tue, 02 Aug 2022 17:31:45: 20000000 INFO @ Tue, 02 Aug 2022 17:31:48: 30000000 INFO @ Tue, 02 Aug 2022 17:31:50: 26000000 INFO @ Tue, 02 Aug 2022 17:31:53: 21000000 INFO @ Tue, 02 Aug 2022 17:31:56: 31000000 INFO @ Tue, 02 Aug 2022 17:31:58: 27000000 INFO @ Tue, 02 Aug 2022 17:32:02: 22000000 INFO @ Tue, 02 Aug 2022 17:32:05: 32000000 INFO @ Tue, 02 Aug 2022 17:32:06: 28000000 INFO @ Tue, 02 Aug 2022 17:32:10: 23000000 INFO @ Tue, 02 Aug 2022 17:32:13: 33000000 INFO @ Tue, 02 Aug 2022 17:32:14: 29000000 INFO @ Tue, 02 Aug 2022 17:32:19: 24000000 INFO @ Tue, 02 Aug 2022 17:32:21: 34000000 INFO @ Tue, 02 Aug 2022 17:32:22: 30000000 INFO @ Tue, 02 Aug 2022 17:32:28: 25000000 INFO @ Tue, 02 Aug 2022 17:32:29: 35000000 INFO @ Tue, 02 Aug 2022 17:32:30: 31000000 INFO @ Tue, 02 Aug 2022 17:32:37: 26000000 INFO @ Tue, 02 Aug 2022 17:32:37: 36000000 INFO @ Tue, 02 Aug 2022 17:32:38: 32000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 02 Aug 2022 17:32:45: 37000000 INFO @ Tue, 02 Aug 2022 17:32:46: 27000000 INFO @ Tue, 02 Aug 2022 17:32:47: 33000000 INFO @ Tue, 02 Aug 2022 17:32:54: 38000000 INFO @ Tue, 02 Aug 2022 17:32:55: 28000000 INFO @ Tue, 02 Aug 2022 17:32:55: 34000000 INFO @ Tue, 02 Aug 2022 17:33:02: 39000000 INFO @ Tue, 02 Aug 2022 17:33:04: 35000000 INFO @ Tue, 02 Aug 2022 17:33:04: 29000000 INFO @ Tue, 02 Aug 2022 17:33:11: 40000000 INFO @ Tue, 02 Aug 2022 17:33:12: 36000000 INFO @ Tue, 02 Aug 2022 17:33:14: 30000000 INFO @ Tue, 02 Aug 2022 17:33:19: 41000000 INFO @ Tue, 02 Aug 2022 17:33:20: 37000000 INFO @ Tue, 02 Aug 2022 17:33:23: 31000000 INFO @ Tue, 02 Aug 2022 17:33:28: 42000000 INFO @ Tue, 02 Aug 2022 17:33:28: 38000000 BigWig に変換しました。 INFO @ Tue, 02 Aug 2022 17:33:32: 32000000 INFO @ Tue, 02 Aug 2022 17:33:36: 39000000 INFO @ Tue, 02 Aug 2022 17:33:36: 43000000 INFO @ Tue, 02 Aug 2022 17:33:40: 33000000 INFO @ Tue, 02 Aug 2022 17:33:44: 40000000 INFO @ Tue, 02 Aug 2022 17:33:45: 44000000 INFO @ Tue, 02 Aug 2022 17:33:49: 34000000 INFO @ Tue, 02 Aug 2022 17:33:52: 41000000 INFO @ Tue, 02 Aug 2022 17:33:53: 45000000 INFO @ Tue, 02 Aug 2022 17:33:57: 35000000 INFO @ Tue, 02 Aug 2022 17:34:00: 42000000 INFO @ Tue, 02 Aug 2022 17:34:02: 46000000 INFO @ Tue, 02 Aug 2022 17:34:06: 36000000 INFO @ Tue, 02 Aug 2022 17:34:08: 43000000 INFO @ Tue, 02 Aug 2022 17:34:10: 47000000 INFO @ Tue, 02 Aug 2022 17:34:15: 37000000 INFO @ Tue, 02 Aug 2022 17:34:16: 44000000 INFO @ Tue, 02 Aug 2022 17:34:18: #1 tag size is determined as 151 bps INFO @ Tue, 02 Aug 2022 17:34:18: #1 tag size = 151 INFO @ Tue, 02 Aug 2022 17:34:18: #1 total tags in treatment: 21670359 INFO @ Tue, 02 Aug 2022 17:34:18: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:34:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:34:18: #1 tags after filtering in treatment: 16163978 INFO @ Tue, 02 Aug 2022 17:34:18: #1 Redundant rate of treatment: 0.25 INFO @ Tue, 02 Aug 2022 17:34:18: #1 finished! INFO @ Tue, 02 Aug 2022 17:34:18: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:34:18: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:34:20: #2 number of paired peaks: 10167 INFO @ Tue, 02 Aug 2022 17:34:20: start model_add_line... INFO @ Tue, 02 Aug 2022 17:34:20: start X-correlation... INFO @ Tue, 02 Aug 2022 17:34:21: end of X-cor INFO @ Tue, 02 Aug 2022 17:34:21: #2 finished! INFO @ Tue, 02 Aug 2022 17:34:21: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 17:34:21: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 17:34:21: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05_model.r WARNING @ Tue, 02 Aug 2022 17:34:21: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:34:21: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 17:34:21: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:34:21: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:34:21: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:34:24: 38000000 INFO @ Tue, 02 Aug 2022 17:34:24: 45000000 INFO @ Tue, 02 Aug 2022 17:34:31: 46000000 INFO @ Tue, 02 Aug 2022 17:34:32: 39000000 INFO @ Tue, 02 Aug 2022 17:34:39: 47000000 INFO @ Tue, 02 Aug 2022 17:34:41: 40000000 INFO @ Tue, 02 Aug 2022 17:34:46: #1 tag size is determined as 151 bps INFO @ Tue, 02 Aug 2022 17:34:46: #1 tag size = 151 INFO @ Tue, 02 Aug 2022 17:34:46: #1 total tags in treatment: 21670359 INFO @ Tue, 02 Aug 2022 17:34:46: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:34:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:34:47: #1 tags after filtering in treatment: 16163978 INFO @ Tue, 02 Aug 2022 17:34:47: #1 Redundant rate of treatment: 0.25 INFO @ Tue, 02 Aug 2022 17:34:47: #1 finished! INFO @ Tue, 02 Aug 2022 17:34:47: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:34:47: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:34:49: #2 number of paired peaks: 10167 INFO @ Tue, 02 Aug 2022 17:34:49: start model_add_line... INFO @ Tue, 02 Aug 2022 17:34:49: start X-correlation... INFO @ Tue, 02 Aug 2022 17:34:49: end of X-cor INFO @ Tue, 02 Aug 2022 17:34:49: #2 finished! INFO @ Tue, 02 Aug 2022 17:34:49: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 17:34:49: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 17:34:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10_model.r WARNING @ Tue, 02 Aug 2022 17:34:49: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:34:49: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 17:34:49: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:34:49: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:34:49: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:34:50: 41000000 INFO @ Tue, 02 Aug 2022 17:34:59: 42000000 INFO @ Tue, 02 Aug 2022 17:35:07: 43000000 INFO @ Tue, 02 Aug 2022 17:35:08: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:35:16: 44000000 INFO @ Tue, 02 Aug 2022 17:35:24: 45000000 INFO @ Tue, 02 Aug 2022 17:35:26: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05_peaks.xls INFO @ Tue, 02 Aug 2022 17:35:26: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:35:26: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.05_summits.bed INFO @ Tue, 02 Aug 2022 17:35:26: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (10579 records, 4 fields): 44 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 17:35:32: 46000000 INFO @ Tue, 02 Aug 2022 17:35:36: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:35:41: 47000000 INFO @ Tue, 02 Aug 2022 17:35:48: #1 tag size is determined as 151 bps INFO @ Tue, 02 Aug 2022 17:35:48: #1 tag size = 151 INFO @ Tue, 02 Aug 2022 17:35:48: #1 total tags in treatment: 21670359 INFO @ Tue, 02 Aug 2022 17:35:48: #1 user defined the maximum tags... INFO @ Tue, 02 Aug 2022 17:35:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 02 Aug 2022 17:35:49: #1 tags after filtering in treatment: 16163978 INFO @ Tue, 02 Aug 2022 17:35:49: #1 Redundant rate of treatment: 0.25 INFO @ Tue, 02 Aug 2022 17:35:49: #1 finished! INFO @ Tue, 02 Aug 2022 17:35:49: #2 Build Peak Model... INFO @ Tue, 02 Aug 2022 17:35:49: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 02 Aug 2022 17:35:50: #2 number of paired peaks: 10167 INFO @ Tue, 02 Aug 2022 17:35:50: start model_add_line... INFO @ Tue, 02 Aug 2022 17:35:51: start X-correlation... INFO @ Tue, 02 Aug 2022 17:35:51: end of X-cor INFO @ Tue, 02 Aug 2022 17:35:51: #2 finished! INFO @ Tue, 02 Aug 2022 17:35:51: #2 predicted fragment length is 194 bps INFO @ Tue, 02 Aug 2022 17:35:51: #2 alternative fragment length(s) may be 194 bps INFO @ Tue, 02 Aug 2022 17:35:51: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20_model.r WARNING @ Tue, 02 Aug 2022 17:35:51: #2 Since the d (194) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 02 Aug 2022 17:35:51: #2 You may need to consider one of the other alternative d(s): 194 WARNING @ Tue, 02 Aug 2022 17:35:51: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 02 Aug 2022 17:35:51: #3 Call peaks... INFO @ Tue, 02 Aug 2022 17:35:51: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 02 Aug 2022 17:35:54: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10_peaks.xls INFO @ Tue, 02 Aug 2022 17:35:54: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:35:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.10_summits.bed INFO @ Tue, 02 Aug 2022 17:35:54: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (9274 records, 4 fields): 46 millis CompletedMACS2peakCalling INFO @ Tue, 02 Aug 2022 17:36:38: #3 Call peaks for each chromosome... INFO @ Tue, 02 Aug 2022 17:36:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20_peaks.xls INFO @ Tue, 02 Aug 2022 17:36:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20_peaks.narrowPeak INFO @ Tue, 02 Aug 2022 17:36:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX5970267/ERX5970267.20_summits.bed INFO @ Tue, 02 Aug 2022 17:36:57: Done! pass1 - making usageList (13 chroms): 2 millis pass2 - checking and writing primary data (7189 records, 4 fields): 87 millis CompletedMACS2peakCalling