Job ID = 14167974 SRX = ERX3978925 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 55170388 spots for ERR3975994/ERR3975994.sra Written 55170388 spots for ERR3975994/ERR3975994.sra fastq に変換しました。 bowtie でマッピング中... Your job 14169141 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:45:37 55170388 reads; of these: 55170388 (100.00%) were paired; of these: 7711095 (13.98%) aligned concordantly 0 times 36191662 (65.60%) aligned concordantly exactly 1 time 11267631 (20.42%) aligned concordantly >1 times ---- 7711095 pairs aligned concordantly 0 times; of these: 1384123 (17.95%) aligned discordantly 1 time ---- 6326972 pairs aligned 0 times concordantly or discordantly; of these: 12653944 mates make up the pairs; of these: 6316120 (49.91%) aligned 0 times 3098235 (24.48%) aligned exactly 1 time 3239589 (25.60%) aligned >1 times 94.28% overall alignment rate Time searching: 02:45:38 Overall time: 02:45:38 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 30290494 / 48566957 = 0.6237 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 17:15:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 17:15:25: #1 read tag files... INFO @ Fri, 10 Dec 2021 17:15:25: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 17:15:30: 1000000 INFO @ Fri, 10 Dec 2021 17:15:34: 2000000 INFO @ Fri, 10 Dec 2021 17:15:39: 3000000 INFO @ Fri, 10 Dec 2021 17:15:44: 4000000 INFO @ Fri, 10 Dec 2021 17:15:49: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 17:15:53: 6000000 INFO @ Fri, 10 Dec 2021 17:15:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 17:15:55: #1 read tag files... INFO @ Fri, 10 Dec 2021 17:15:55: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 17:15:58: 7000000 INFO @ Fri, 10 Dec 2021 17:16:00: 1000000 INFO @ Fri, 10 Dec 2021 17:16:03: 8000000 INFO @ Fri, 10 Dec 2021 17:16:05: 2000000 INFO @ Fri, 10 Dec 2021 17:16:08: 9000000 INFO @ Fri, 10 Dec 2021 17:16:10: 3000000 INFO @ Fri, 10 Dec 2021 17:16:12: 10000000 INFO @ Fri, 10 Dec 2021 17:16:14: 4000000 INFO @ Fri, 10 Dec 2021 17:16:17: 11000000 INFO @ Fri, 10 Dec 2021 17:16:19: 5000000 INFO @ Fri, 10 Dec 2021 17:16:22: 12000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 17:16:24: 6000000 INFO @ Fri, 10 Dec 2021 17:16:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 17:16:25: #1 read tag files... INFO @ Fri, 10 Dec 2021 17:16:25: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 17:16:27: 13000000 INFO @ Fri, 10 Dec 2021 17:16:29: 7000000 INFO @ Fri, 10 Dec 2021 17:16:30: 1000000 INFO @ Fri, 10 Dec 2021 17:16:32: 14000000 INFO @ Fri, 10 Dec 2021 17:16:34: 8000000 INFO @ Fri, 10 Dec 2021 17:16:35: 2000000 INFO @ Fri, 10 Dec 2021 17:16:37: 15000000 INFO @ Fri, 10 Dec 2021 17:16:38: 9000000 INFO @ Fri, 10 Dec 2021 17:16:40: 3000000 INFO @ Fri, 10 Dec 2021 17:16:42: 16000000 INFO @ Fri, 10 Dec 2021 17:16:43: 10000000 INFO @ Fri, 10 Dec 2021 17:16:45: 4000000 INFO @ Fri, 10 Dec 2021 17:16:47: 17000000 INFO @ Fri, 10 Dec 2021 17:16:48: 11000000 INFO @ Fri, 10 Dec 2021 17:16:50: 5000000 INFO @ Fri, 10 Dec 2021 17:16:52: 18000000 INFO @ Fri, 10 Dec 2021 17:16:53: 12000000 INFO @ Fri, 10 Dec 2021 17:16:55: 6000000 INFO @ Fri, 10 Dec 2021 17:16:57: 19000000 INFO @ Fri, 10 Dec 2021 17:16:58: 13000000 INFO @ Fri, 10 Dec 2021 17:17:00: 7000000 INFO @ Fri, 10 Dec 2021 17:17:02: 20000000 INFO @ Fri, 10 Dec 2021 17:17:03: 14000000 INFO @ Fri, 10 Dec 2021 17:17:05: 8000000 INFO @ Fri, 10 Dec 2021 17:17:07: 21000000 INFO @ Fri, 10 Dec 2021 17:17:08: 15000000 INFO @ Fri, 10 Dec 2021 17:17:10: 9000000 INFO @ Fri, 10 Dec 2021 17:17:12: 22000000 INFO @ Fri, 10 Dec 2021 17:17:13: 16000000 INFO @ Fri, 10 Dec 2021 17:17:15: 10000000 INFO @ Fri, 10 Dec 2021 17:17:17: 23000000 INFO @ Fri, 10 Dec 2021 17:17:18: 17000000 INFO @ Fri, 10 Dec 2021 17:17:20: 11000000 INFO @ Fri, 10 Dec 2021 17:17:22: 24000000 INFO @ Fri, 10 Dec 2021 17:17:22: 18000000 INFO @ Fri, 10 Dec 2021 17:17:25: 12000000 INFO @ Fri, 10 Dec 2021 17:17:27: 25000000 INFO @ Fri, 10 Dec 2021 17:17:27: 19000000 INFO @ Fri, 10 Dec 2021 17:17:30: 13000000 INFO @ Fri, 10 Dec 2021 17:17:32: 26000000 INFO @ Fri, 10 Dec 2021 17:17:32: 20000000 INFO @ Fri, 10 Dec 2021 17:17:35: 14000000 INFO @ Fri, 10 Dec 2021 17:17:37: 27000000 INFO @ Fri, 10 Dec 2021 17:17:37: 21000000 INFO @ Fri, 10 Dec 2021 17:17:40: 15000000 INFO @ Fri, 10 Dec 2021 17:17:42: 28000000 INFO @ Fri, 10 Dec 2021 17:17:42: 22000000 INFO @ Fri, 10 Dec 2021 17:17:45: 16000000 INFO @ Fri, 10 Dec 2021 17:17:47: 29000000 INFO @ Fri, 10 Dec 2021 17:17:47: 23000000 INFO @ Fri, 10 Dec 2021 17:17:50: 17000000 INFO @ Fri, 10 Dec 2021 17:17:52: 24000000 INFO @ Fri, 10 Dec 2021 17:17:52: 30000000 INFO @ Fri, 10 Dec 2021 17:17:55: 18000000 INFO @ Fri, 10 Dec 2021 17:17:56: 25000000 INFO @ Fri, 10 Dec 2021 17:17:57: 31000000 INFO @ Fri, 10 Dec 2021 17:18:00: 19000000 INFO @ Fri, 10 Dec 2021 17:18:01: 26000000 INFO @ Fri, 10 Dec 2021 17:18:02: 32000000 INFO @ Fri, 10 Dec 2021 17:18:05: 20000000 INFO @ Fri, 10 Dec 2021 17:18:06: 27000000 INFO @ Fri, 10 Dec 2021 17:18:07: 33000000 INFO @ Fri, 10 Dec 2021 17:18:10: 21000000 INFO @ Fri, 10 Dec 2021 17:18:11: 28000000 INFO @ Fri, 10 Dec 2021 17:18:12: 34000000 INFO @ Fri, 10 Dec 2021 17:18:15: 22000000 INFO @ Fri, 10 Dec 2021 17:18:16: 29000000 INFO @ Fri, 10 Dec 2021 17:18:17: 35000000 INFO @ Fri, 10 Dec 2021 17:18:20: 23000000 INFO @ Fri, 10 Dec 2021 17:18:21: 30000000 INFO @ Fri, 10 Dec 2021 17:18:21: 36000000 INFO @ Fri, 10 Dec 2021 17:18:24: 24000000 INFO @ Fri, 10 Dec 2021 17:18:26: 31000000 INFO @ Fri, 10 Dec 2021 17:18:26: 37000000 INFO @ Fri, 10 Dec 2021 17:18:29: 25000000 INFO @ Fri, 10 Dec 2021 17:18:31: 32000000 INFO @ Fri, 10 Dec 2021 17:18:31: 38000000 INFO @ Fri, 10 Dec 2021 17:18:34: 26000000 INFO @ Fri, 10 Dec 2021 17:18:36: 33000000 INFO @ Fri, 10 Dec 2021 17:18:36: 39000000 INFO @ Fri, 10 Dec 2021 17:18:39: 27000000 INFO @ Fri, 10 Dec 2021 17:18:41: 34000000 INFO @ Fri, 10 Dec 2021 17:18:41: 40000000 INFO @ Fri, 10 Dec 2021 17:18:44: 28000000 INFO @ Fri, 10 Dec 2021 17:18:45: 35000000 INFO @ Fri, 10 Dec 2021 17:18:46: 41000000 INFO @ Fri, 10 Dec 2021 17:18:49: 29000000 INFO @ Fri, 10 Dec 2021 17:18:50: 36000000 INFO @ Fri, 10 Dec 2021 17:18:51: 42000000 INFO @ Fri, 10 Dec 2021 17:18:54: 30000000 INFO @ Fri, 10 Dec 2021 17:18:55: 43000000 INFO @ Fri, 10 Dec 2021 17:18:55: 37000000 INFO @ Fri, 10 Dec 2021 17:18:58: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 17:18:58: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 17:18:58: #1 total tags in treatment: 18025595 INFO @ Fri, 10 Dec 2021 17:18:58: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 17:18:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 17:18:58: #1 tags after filtering in treatment: 16297460 INFO @ Fri, 10 Dec 2021 17:18:58: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 17:18:58: #1 finished! INFO @ Fri, 10 Dec 2021 17:18:58: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 17:18:58: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 17:18:59: #2 number of paired peaks: 410 WARNING @ Fri, 10 Dec 2021 17:18:59: Fewer paired peaks (410) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 410 pairs to build model! INFO @ Fri, 10 Dec 2021 17:18:59: start model_add_line... INFO @ Fri, 10 Dec 2021 17:18:59: start X-correlation... INFO @ Fri, 10 Dec 2021 17:18:59: end of X-cor INFO @ Fri, 10 Dec 2021 17:18:59: #2 finished! INFO @ Fri, 10 Dec 2021 17:18:59: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 17:18:59: #2 alternative fragment length(s) may be 146,597 bps INFO @ Fri, 10 Dec 2021 17:18:59: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05_model.r WARNING @ Fri, 10 Dec 2021 17:18:59: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 17:18:59: #2 You may need to consider one of the other alternative d(s): 146,597 WARNING @ Fri, 10 Dec 2021 17:18:59: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 17:18:59: #3 Call peaks... INFO @ Fri, 10 Dec 2021 17:18:59: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 17:18:59: 31000000 INFO @ Fri, 10 Dec 2021 17:19:00: 38000000 INFO @ Fri, 10 Dec 2021 17:19:04: 32000000 INFO @ Fri, 10 Dec 2021 17:19:05: 39000000 INFO @ Fri, 10 Dec 2021 17:19:09: 33000000 INFO @ Fri, 10 Dec 2021 17:19:10: 40000000 INFO @ Fri, 10 Dec 2021 17:19:14: 34000000 INFO @ Fri, 10 Dec 2021 17:19:15: 41000000 INFO @ Fri, 10 Dec 2021 17:19:19: 35000000 INFO @ Fri, 10 Dec 2021 17:19:19: 42000000 INFO @ Fri, 10 Dec 2021 17:19:24: 36000000 INFO @ Fri, 10 Dec 2021 17:19:24: 43000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 17:19:26: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 17:19:26: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 17:19:26: #1 total tags in treatment: 18025595 INFO @ Fri, 10 Dec 2021 17:19:26: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 17:19:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 17:19:27: #1 tags after filtering in treatment: 16297460 INFO @ Fri, 10 Dec 2021 17:19:27: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 17:19:27: #1 finished! INFO @ Fri, 10 Dec 2021 17:19:27: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 17:19:27: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 17:19:28: #2 number of paired peaks: 410 WARNING @ Fri, 10 Dec 2021 17:19:28: Fewer paired peaks (410) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 410 pairs to build model! INFO @ Fri, 10 Dec 2021 17:19:28: start model_add_line... INFO @ Fri, 10 Dec 2021 17:19:28: start X-correlation... INFO @ Fri, 10 Dec 2021 17:19:28: end of X-cor INFO @ Fri, 10 Dec 2021 17:19:28: #2 finished! INFO @ Fri, 10 Dec 2021 17:19:28: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 17:19:28: #2 alternative fragment length(s) may be 146,597 bps INFO @ Fri, 10 Dec 2021 17:19:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10_model.r WARNING @ Fri, 10 Dec 2021 17:19:28: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 17:19:28: #2 You may need to consider one of the other alternative d(s): 146,597 WARNING @ Fri, 10 Dec 2021 17:19:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 17:19:28: #3 Call peaks... INFO @ Fri, 10 Dec 2021 17:19:28: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 17:19:29: 37000000 INFO @ Fri, 10 Dec 2021 17:19:31: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 17:19:33: 38000000 INFO @ Fri, 10 Dec 2021 17:19:38: 39000000 INFO @ Fri, 10 Dec 2021 17:19:43: 40000000 INFO @ Fri, 10 Dec 2021 17:19:47: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05_peaks.xls INFO @ Fri, 10 Dec 2021 17:19:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 17:19:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.05_summits.bed INFO @ Fri, 10 Dec 2021 17:19:47: Done! INFO @ Fri, 10 Dec 2021 17:19:48: 41000000 pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (11296 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 17:19:52: 42000000 INFO @ Fri, 10 Dec 2021 17:19:57: 43000000 INFO @ Fri, 10 Dec 2021 17:19:59: #1 tag size is determined as 80 bps INFO @ Fri, 10 Dec 2021 17:19:59: #1 tag size = 80 INFO @ Fri, 10 Dec 2021 17:19:59: #1 total tags in treatment: 18025595 INFO @ Fri, 10 Dec 2021 17:19:59: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 17:19:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 17:19:59: #1 tags after filtering in treatment: 16297460 INFO @ Fri, 10 Dec 2021 17:19:59: #1 Redundant rate of treatment: 0.10 INFO @ Fri, 10 Dec 2021 17:19:59: #1 finished! INFO @ Fri, 10 Dec 2021 17:19:59: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 17:19:59: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 17:20:00: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 17:20:00: #2 number of paired peaks: 410 WARNING @ Fri, 10 Dec 2021 17:20:00: Fewer paired peaks (410) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 410 pairs to build model! INFO @ Fri, 10 Dec 2021 17:20:00: start model_add_line... INFO @ Fri, 10 Dec 2021 17:20:01: start X-correlation... INFO @ Fri, 10 Dec 2021 17:20:01: end of X-cor INFO @ Fri, 10 Dec 2021 17:20:01: #2 finished! INFO @ Fri, 10 Dec 2021 17:20:01: #2 predicted fragment length is 146 bps INFO @ Fri, 10 Dec 2021 17:20:01: #2 alternative fragment length(s) may be 146,597 bps INFO @ Fri, 10 Dec 2021 17:20:01: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20_model.r WARNING @ Fri, 10 Dec 2021 17:20:01: #2 Since the d (146) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 17:20:01: #2 You may need to consider one of the other alternative d(s): 146,597 WARNING @ Fri, 10 Dec 2021 17:20:01: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 17:20:01: #3 Call peaks... INFO @ Fri, 10 Dec 2021 17:20:01: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 17:20:16: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10_peaks.xls INFO @ Fri, 10 Dec 2021 17:20:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 17:20:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.10_summits.bed INFO @ Fri, 10 Dec 2021 17:20:16: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (5890 records, 4 fields): 25 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 17:20:32: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 17:20:48: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20_peaks.xls INFO @ Fri, 10 Dec 2021 17:20:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 17:20:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978925/ERX3978925.20_summits.bed INFO @ Fri, 10 Dec 2021 17:20:48: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1929 records, 4 fields): 18 millis CompletedMACS2peakCalling