Job ID = 14168096 SRX = ERX3978821 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 28364479 spots for ERR3975870/ERR3975870.sra Written 28364479 spots for ERR3975870/ERR3975870.sra Read 28652127 spots for ERR3975882/ERR3975882.sra Written 28652127 spots for ERR3975882/ERR3975882.sra fastq に変換しました。 bowtie でマッピング中... Your job 14169508 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:37:58 57016606 reads; of these: 57016606 (100.00%) were paired; of these: 17405841 (30.53%) aligned concordantly 0 times 27562629 (48.34%) aligned concordantly exactly 1 time 12048136 (21.13%) aligned concordantly >1 times ---- 17405841 pairs aligned concordantly 0 times; of these: 7105289 (40.82%) aligned discordantly 1 time ---- 10300552 pairs aligned 0 times concordantly or discordantly; of these: 20601104 mates make up the pairs; of these: 11730901 (56.94%) aligned 0 times 1313273 (6.37%) aligned exactly 1 time 7556930 (36.68%) aligned >1 times 89.71% overall alignment rate Time searching: 02:37:58 Overall time: 02:37:58 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 68 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6785948 / 46055510 = 0.1473 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:42:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:42:35: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:42:35: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:42:44: 1000000 INFO @ Fri, 10 Dec 2021 18:42:52: 2000000 INFO @ Fri, 10 Dec 2021 18:43:00: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:43:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:43:04: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:43:04: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:43:08: 4000000 INFO @ Fri, 10 Dec 2021 18:43:12: 1000000 INFO @ Fri, 10 Dec 2021 18:43:17: 5000000 INFO @ Fri, 10 Dec 2021 18:43:19: 2000000 INFO @ Fri, 10 Dec 2021 18:43:26: 6000000 INFO @ Fri, 10 Dec 2021 18:43:27: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 18:43:34: 7000000 INFO @ Fri, 10 Dec 2021 18:43:34: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 18:43:34: 4000000 INFO @ Fri, 10 Dec 2021 18:43:34: #1 read tag files... INFO @ Fri, 10 Dec 2021 18:43:34: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 18:43:42: 1000000 INFO @ Fri, 10 Dec 2021 18:43:42: 5000000 INFO @ Fri, 10 Dec 2021 18:43:43: 8000000 INFO @ Fri, 10 Dec 2021 18:43:50: 2000000 INFO @ Fri, 10 Dec 2021 18:43:50: 6000000 INFO @ Fri, 10 Dec 2021 18:43:52: 9000000 INFO @ Fri, 10 Dec 2021 18:43:57: 7000000 INFO @ Fri, 10 Dec 2021 18:43:57: 3000000 INFO @ Fri, 10 Dec 2021 18:44:01: 10000000 INFO @ Fri, 10 Dec 2021 18:44:05: 8000000 INFO @ Fri, 10 Dec 2021 18:44:05: 4000000 INFO @ Fri, 10 Dec 2021 18:44:10: 11000000 INFO @ Fri, 10 Dec 2021 18:44:13: 5000000 INFO @ Fri, 10 Dec 2021 18:44:13: 9000000 INFO @ Fri, 10 Dec 2021 18:44:18: 12000000 INFO @ Fri, 10 Dec 2021 18:44:20: 10000000 INFO @ Fri, 10 Dec 2021 18:44:20: 6000000 INFO @ Fri, 10 Dec 2021 18:44:27: 13000000 INFO @ Fri, 10 Dec 2021 18:44:28: 11000000 INFO @ Fri, 10 Dec 2021 18:44:28: 7000000 INFO @ Fri, 10 Dec 2021 18:44:35: 12000000 INFO @ Fri, 10 Dec 2021 18:44:36: 8000000 INFO @ Fri, 10 Dec 2021 18:44:36: 14000000 INFO @ Fri, 10 Dec 2021 18:44:43: 13000000 INFO @ Fri, 10 Dec 2021 18:44:43: 9000000 INFO @ Fri, 10 Dec 2021 18:44:44: 15000000 INFO @ Fri, 10 Dec 2021 18:44:51: 14000000 INFO @ Fri, 10 Dec 2021 18:44:51: 10000000 INFO @ Fri, 10 Dec 2021 18:44:53: 16000000 INFO @ Fri, 10 Dec 2021 18:44:58: 15000000 INFO @ Fri, 10 Dec 2021 18:44:59: 11000000 INFO @ Fri, 10 Dec 2021 18:45:02: 17000000 INFO @ Fri, 10 Dec 2021 18:45:06: 16000000 INFO @ Fri, 10 Dec 2021 18:45:06: 12000000 INFO @ Fri, 10 Dec 2021 18:45:10: 18000000 INFO @ Fri, 10 Dec 2021 18:45:14: 17000000 INFO @ Fri, 10 Dec 2021 18:45:14: 13000000 INFO @ Fri, 10 Dec 2021 18:45:19: 19000000 INFO @ Fri, 10 Dec 2021 18:45:21: 18000000 INFO @ Fri, 10 Dec 2021 18:45:21: 14000000 INFO @ Fri, 10 Dec 2021 18:45:28: 20000000 INFO @ Fri, 10 Dec 2021 18:45:29: 19000000 INFO @ Fri, 10 Dec 2021 18:45:29: 15000000 INFO @ Fri, 10 Dec 2021 18:45:36: 20000000 INFO @ Fri, 10 Dec 2021 18:45:36: 21000000 INFO @ Fri, 10 Dec 2021 18:45:37: 16000000 INFO @ Fri, 10 Dec 2021 18:45:44: 21000000 INFO @ Fri, 10 Dec 2021 18:45:44: 17000000 INFO @ Fri, 10 Dec 2021 18:45:45: 22000000 INFO @ Fri, 10 Dec 2021 18:45:52: 22000000 INFO @ Fri, 10 Dec 2021 18:45:52: 18000000 INFO @ Fri, 10 Dec 2021 18:45:54: 23000000 INFO @ Fri, 10 Dec 2021 18:45:59: 23000000 INFO @ Fri, 10 Dec 2021 18:45:59: 19000000 INFO @ Fri, 10 Dec 2021 18:46:03: 24000000 INFO @ Fri, 10 Dec 2021 18:46:07: 24000000 INFO @ Fri, 10 Dec 2021 18:46:07: 20000000 INFO @ Fri, 10 Dec 2021 18:46:11: 25000000 INFO @ Fri, 10 Dec 2021 18:46:14: 25000000 INFO @ Fri, 10 Dec 2021 18:46:15: 21000000 INFO @ Fri, 10 Dec 2021 18:46:20: 26000000 INFO @ Fri, 10 Dec 2021 18:46:22: 26000000 INFO @ Fri, 10 Dec 2021 18:46:22: 22000000 INFO @ Fri, 10 Dec 2021 18:46:29: 27000000 INFO @ Fri, 10 Dec 2021 18:46:30: 27000000 INFO @ Fri, 10 Dec 2021 18:46:30: 23000000 INFO @ Fri, 10 Dec 2021 18:46:37: 24000000 INFO @ Fri, 10 Dec 2021 18:46:37: 28000000 INFO @ Fri, 10 Dec 2021 18:46:38: 28000000 INFO @ Fri, 10 Dec 2021 18:46:45: 25000000 INFO @ Fri, 10 Dec 2021 18:46:46: 29000000 INFO @ Fri, 10 Dec 2021 18:46:47: 29000000 INFO @ Fri, 10 Dec 2021 18:46:52: 26000000 INFO @ Fri, 10 Dec 2021 18:46:55: 30000000 INFO @ Fri, 10 Dec 2021 18:46:56: 30000000 INFO @ Fri, 10 Dec 2021 18:47:00: 27000000 INFO @ Fri, 10 Dec 2021 18:47:04: 31000000 INFO @ Fri, 10 Dec 2021 18:47:05: 31000000 INFO @ Fri, 10 Dec 2021 18:47:08: 28000000 INFO @ Fri, 10 Dec 2021 18:47:13: 32000000 INFO @ Fri, 10 Dec 2021 18:47:14: 32000000 INFO @ Fri, 10 Dec 2021 18:47:15: 29000000 INFO @ Fri, 10 Dec 2021 18:47:22: 33000000 INFO @ Fri, 10 Dec 2021 18:47:23: 30000000 INFO @ Fri, 10 Dec 2021 18:47:23: 33000000 INFO @ Fri, 10 Dec 2021 18:47:30: 31000000 INFO @ Fri, 10 Dec 2021 18:47:31: 34000000 INFO @ Fri, 10 Dec 2021 18:47:32: 34000000 INFO @ Fri, 10 Dec 2021 18:47:38: 32000000 INFO @ Fri, 10 Dec 2021 18:47:40: 35000000 INFO @ Fri, 10 Dec 2021 18:47:40: 35000000 INFO @ Fri, 10 Dec 2021 18:47:45: 33000000 INFO @ Fri, 10 Dec 2021 18:47:48: 36000000 INFO @ Fri, 10 Dec 2021 18:47:49: 36000000 INFO @ Fri, 10 Dec 2021 18:47:53: 34000000 INFO @ Fri, 10 Dec 2021 18:47:57: 37000000 INFO @ Fri, 10 Dec 2021 18:47:58: 37000000 INFO @ Fri, 10 Dec 2021 18:48:00: 35000000 INFO @ Fri, 10 Dec 2021 18:48:06: 38000000 INFO @ Fri, 10 Dec 2021 18:48:07: 38000000 INFO @ Fri, 10 Dec 2021 18:48:08: 36000000 INFO @ Fri, 10 Dec 2021 18:48:15: 39000000 INFO @ Fri, 10 Dec 2021 18:48:15: 39000000 INFO @ Fri, 10 Dec 2021 18:48:16: 37000000 INFO @ Fri, 10 Dec 2021 18:48:23: 38000000 INFO @ Fri, 10 Dec 2021 18:48:23: 40000000 INFO @ Fri, 10 Dec 2021 18:48:24: 40000000 INFO @ Fri, 10 Dec 2021 18:48:31: 39000000 INFO @ Fri, 10 Dec 2021 18:48:32: 41000000 INFO @ Fri, 10 Dec 2021 18:48:33: 41000000 INFO @ Fri, 10 Dec 2021 18:48:38: 40000000 INFO @ Fri, 10 Dec 2021 18:48:41: 42000000 INFO @ Fri, 10 Dec 2021 18:48:42: 42000000 INFO @ Fri, 10 Dec 2021 18:48:46: 41000000 INFO @ Fri, 10 Dec 2021 18:48:49: 43000000 INFO @ Fri, 10 Dec 2021 18:48:50: 43000000 INFO @ Fri, 10 Dec 2021 18:48:53: 42000000 INFO @ Fri, 10 Dec 2021 18:48:58: 44000000 INFO @ Fri, 10 Dec 2021 18:48:58: 44000000 INFO @ Fri, 10 Dec 2021 18:49:01: 43000000 INFO @ Fri, 10 Dec 2021 18:49:06: 45000000 INFO @ Fri, 10 Dec 2021 18:49:07: 45000000 INFO @ Fri, 10 Dec 2021 18:49:08: 44000000 INFO @ Fri, 10 Dec 2021 18:49:15: 46000000 INFO @ Fri, 10 Dec 2021 18:49:15: 45000000 INFO @ Fri, 10 Dec 2021 18:49:16: 46000000 INFO @ Fri, 10 Dec 2021 18:49:23: 46000000 INFO @ Fri, 10 Dec 2021 18:49:24: 47000000 INFO @ Fri, 10 Dec 2021 18:49:25: 47000000 INFO @ Fri, 10 Dec 2021 18:49:30: 47000000 INFO @ Fri, 10 Dec 2021 18:49:33: 48000000 INFO @ Fri, 10 Dec 2021 18:49:34: 48000000 INFO @ Fri, 10 Dec 2021 18:49:38: 48000000 INFO @ Fri, 10 Dec 2021 18:49:42: 49000000 INFO @ Fri, 10 Dec 2021 18:49:42: 49000000 INFO @ Fri, 10 Dec 2021 18:49:45: 49000000 INFO @ Fri, 10 Dec 2021 18:49:51: 50000000 INFO @ Fri, 10 Dec 2021 18:49:51: 50000000 INFO @ Fri, 10 Dec 2021 18:49:53: 50000000 INFO @ Fri, 10 Dec 2021 18:49:59: 51000000 INFO @ Fri, 10 Dec 2021 18:50:00: 51000000 INFO @ Fri, 10 Dec 2021 18:50:00: 51000000 INFO @ Fri, 10 Dec 2021 18:50:08: 52000000 INFO @ Fri, 10 Dec 2021 18:50:09: 52000000 INFO @ Fri, 10 Dec 2021 18:50:09: 52000000 INFO @ Fri, 10 Dec 2021 18:50:17: 53000000 INFO @ Fri, 10 Dec 2021 18:50:17: 53000000 INFO @ Fri, 10 Dec 2021 18:50:18: 53000000 INFO @ Fri, 10 Dec 2021 18:50:26: 54000000 INFO @ Fri, 10 Dec 2021 18:50:26: 54000000 INFO @ Fri, 10 Dec 2021 18:50:27: 54000000 INFO @ Fri, 10 Dec 2021 18:50:34: 55000000 INFO @ Fri, 10 Dec 2021 18:50:35: 55000000 INFO @ Fri, 10 Dec 2021 18:50:36: 55000000 INFO @ Fri, 10 Dec 2021 18:50:43: 56000000 INFO @ Fri, 10 Dec 2021 18:50:44: 56000000 INFO @ Fri, 10 Dec 2021 18:50:44: 56000000 INFO @ Fri, 10 Dec 2021 18:50:52: 57000000 INFO @ Fri, 10 Dec 2021 18:50:53: 57000000 INFO @ Fri, 10 Dec 2021 18:50:53: 57000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 18:51:01: 58000000 INFO @ Fri, 10 Dec 2021 18:51:02: 58000000 INFO @ Fri, 10 Dec 2021 18:51:02: 58000000 INFO @ Fri, 10 Dec 2021 18:51:10: 59000000 INFO @ Fri, 10 Dec 2021 18:51:11: 59000000 INFO @ Fri, 10 Dec 2021 18:51:11: 59000000 INFO @ Fri, 10 Dec 2021 18:51:19: 60000000 INFO @ Fri, 10 Dec 2021 18:51:20: 60000000 INFO @ Fri, 10 Dec 2021 18:51:20: 60000000 INFO @ Fri, 10 Dec 2021 18:51:28: 61000000 INFO @ Fri, 10 Dec 2021 18:51:29: 61000000 INFO @ Fri, 10 Dec 2021 18:51:29: 61000000 INFO @ Fri, 10 Dec 2021 18:51:37: 62000000 INFO @ Fri, 10 Dec 2021 18:51:37: 62000000 INFO @ Fri, 10 Dec 2021 18:51:38: 62000000 INFO @ Fri, 10 Dec 2021 18:51:45: 63000000 INFO @ Fri, 10 Dec 2021 18:51:46: 63000000 INFO @ Fri, 10 Dec 2021 18:51:47: 63000000 INFO @ Fri, 10 Dec 2021 18:51:54: 64000000 INFO @ Fri, 10 Dec 2021 18:51:55: 64000000 INFO @ Fri, 10 Dec 2021 18:51:55: 64000000 INFO @ Fri, 10 Dec 2021 18:52:03: 65000000 INFO @ Fri, 10 Dec 2021 18:52:04: 65000000 INFO @ Fri, 10 Dec 2021 18:52:04: 65000000 INFO @ Fri, 10 Dec 2021 18:52:12: 66000000 INFO @ Fri, 10 Dec 2021 18:52:13: 66000000 INFO @ Fri, 10 Dec 2021 18:52:13: 66000000 INFO @ Fri, 10 Dec 2021 18:52:21: 67000000 INFO @ Fri, 10 Dec 2021 18:52:21: 67000000 INFO @ Fri, 10 Dec 2021 18:52:22: 67000000 INFO @ Fri, 10 Dec 2021 18:52:29: 68000000 INFO @ Fri, 10 Dec 2021 18:52:30: 68000000 INFO @ Fri, 10 Dec 2021 18:52:31: 68000000 INFO @ Fri, 10 Dec 2021 18:52:38: 69000000 INFO @ Fri, 10 Dec 2021 18:52:39: 69000000 INFO @ Fri, 10 Dec 2021 18:52:39: 69000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 18:52:47: 70000000 INFO @ Fri, 10 Dec 2021 18:52:48: 70000000 INFO @ Fri, 10 Dec 2021 18:52:49: 70000000 INFO @ Fri, 10 Dec 2021 18:52:56: 71000000 INFO @ Fri, 10 Dec 2021 18:52:57: 71000000 INFO @ Fri, 10 Dec 2021 18:52:58: 71000000 INFO @ Fri, 10 Dec 2021 18:53:06: 72000000 INFO @ Fri, 10 Dec 2021 18:53:06: 72000000 INFO @ Fri, 10 Dec 2021 18:53:07: 72000000 INFO @ Fri, 10 Dec 2021 18:53:15: 73000000 INFO @ Fri, 10 Dec 2021 18:53:15: 73000000 INFO @ Fri, 10 Dec 2021 18:53:16: 73000000 INFO @ Fri, 10 Dec 2021 18:53:24: 74000000 INFO @ Fri, 10 Dec 2021 18:53:24: 74000000 INFO @ Fri, 10 Dec 2021 18:53:25: 74000000 INFO @ Fri, 10 Dec 2021 18:53:33: 75000000 INFO @ Fri, 10 Dec 2021 18:53:34: 75000000 INFO @ Fri, 10 Dec 2021 18:53:34: 75000000 INFO @ Fri, 10 Dec 2021 18:53:42: 76000000 INFO @ Fri, 10 Dec 2021 18:53:43: 76000000 INFO @ Fri, 10 Dec 2021 18:53:43: 76000000 INFO @ Fri, 10 Dec 2021 18:53:51: 77000000 INFO @ Fri, 10 Dec 2021 18:53:52: 77000000 INFO @ Fri, 10 Dec 2021 18:53:52: 77000000 INFO @ Fri, 10 Dec 2021 18:54:00: 78000000 INFO @ Fri, 10 Dec 2021 18:54:01: 78000000 INFO @ Fri, 10 Dec 2021 18:54:01: 78000000 INFO @ Fri, 10 Dec 2021 18:54:09: 79000000 INFO @ Fri, 10 Dec 2021 18:54:10: 79000000 INFO @ Fri, 10 Dec 2021 18:54:10: 79000000 INFO @ Fri, 10 Dec 2021 18:54:18: 80000000 INFO @ Fri, 10 Dec 2021 18:54:19: 80000000 INFO @ Fri, 10 Dec 2021 18:54:19: 80000000 INFO @ Fri, 10 Dec 2021 18:54:27: 81000000 INFO @ Fri, 10 Dec 2021 18:54:28: 81000000 INFO @ Fri, 10 Dec 2021 18:54:28: 81000000 INFO @ Fri, 10 Dec 2021 18:54:36: 82000000 INFO @ Fri, 10 Dec 2021 18:54:37: 82000000 INFO @ Fri, 10 Dec 2021 18:54:37: 82000000 INFO @ Fri, 10 Dec 2021 18:54:45: 83000000 INFO @ Fri, 10 Dec 2021 18:54:46: 83000000 INFO @ Fri, 10 Dec 2021 18:54:46: 83000000 INFO @ Fri, 10 Dec 2021 18:54:54: 84000000 INFO @ Fri, 10 Dec 2021 18:54:55: 84000000 INFO @ Fri, 10 Dec 2021 18:54:55: 84000000 INFO @ Fri, 10 Dec 2021 18:55:02: 85000000 INFO @ Fri, 10 Dec 2021 18:55:03: 85000000 INFO @ Fri, 10 Dec 2021 18:55:04: 85000000 INFO @ Fri, 10 Dec 2021 18:55:11: 86000000 INFO @ Fri, 10 Dec 2021 18:55:12: 86000000 INFO @ Fri, 10 Dec 2021 18:55:12: 86000000 INFO @ Fri, 10 Dec 2021 18:55:19: 87000000 INFO @ Fri, 10 Dec 2021 18:55:20: 87000000 INFO @ Fri, 10 Dec 2021 18:55:21: 87000000 INFO @ Fri, 10 Dec 2021 18:55:28: 88000000 INFO @ Fri, 10 Dec 2021 18:55:29: 88000000 INFO @ Fri, 10 Dec 2021 18:55:29: 88000000 INFO @ Fri, 10 Dec 2021 18:55:34: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 18:55:34: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 18:55:34: #1 total tags in treatment: 33467293 INFO @ Fri, 10 Dec 2021 18:55:34: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:55:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:55:35: #1 tags after filtering in treatment: 24537148 INFO @ Fri, 10 Dec 2021 18:55:35: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 10 Dec 2021 18:55:35: #1 finished! INFO @ Fri, 10 Dec 2021 18:55:35: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:55:35: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:55:35: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 18:55:35: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 18:55:35: #1 total tags in treatment: 33467293 INFO @ Fri, 10 Dec 2021 18:55:35: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:55:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:55:36: #1 tag size is determined as 121 bps INFO @ Fri, 10 Dec 2021 18:55:36: #1 tag size = 121 INFO @ Fri, 10 Dec 2021 18:55:36: #1 total tags in treatment: 33467293 INFO @ Fri, 10 Dec 2021 18:55:36: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 18:55:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 18:55:36: #1 tags after filtering in treatment: 24537148 INFO @ Fri, 10 Dec 2021 18:55:36: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 10 Dec 2021 18:55:36: #1 finished! INFO @ Fri, 10 Dec 2021 18:55:36: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:55:36: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:55:36: #1 tags after filtering in treatment: 24537148 INFO @ Fri, 10 Dec 2021 18:55:36: #1 Redundant rate of treatment: 0.27 INFO @ Fri, 10 Dec 2021 18:55:36: #1 finished! INFO @ Fri, 10 Dec 2021 18:55:36: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 18:55:36: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 18:55:37: #2 number of paired peaks: 379 WARNING @ Fri, 10 Dec 2021 18:55:37: Fewer paired peaks (379) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 379 pairs to build model! INFO @ Fri, 10 Dec 2021 18:55:37: start model_add_line... INFO @ Fri, 10 Dec 2021 18:55:37: start X-correlation... INFO @ Fri, 10 Dec 2021 18:55:37: end of X-cor INFO @ Fri, 10 Dec 2021 18:55:37: #2 finished! INFO @ Fri, 10 Dec 2021 18:55:37: #2 predicted fragment length is 95 bps INFO @ Fri, 10 Dec 2021 18:55:37: #2 alternative fragment length(s) may be 4,95 bps INFO @ Fri, 10 Dec 2021 18:55:37: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05_model.r WARNING @ Fri, 10 Dec 2021 18:55:37: #2 Since the d (95) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 18:55:37: #2 You may need to consider one of the other alternative d(s): 4,95 WARNING @ Fri, 10 Dec 2021 18:55:37: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 18:55:37: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:55:37: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:55:38: #2 number of paired peaks: 379 WARNING @ Fri, 10 Dec 2021 18:55:38: Fewer paired peaks (379) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 379 pairs to build model! INFO @ Fri, 10 Dec 2021 18:55:38: start model_add_line... INFO @ Fri, 10 Dec 2021 18:55:38: start X-correlation... INFO @ Fri, 10 Dec 2021 18:55:38: end of X-cor INFO @ Fri, 10 Dec 2021 18:55:38: #2 finished! INFO @ Fri, 10 Dec 2021 18:55:38: #2 predicted fragment length is 95 bps INFO @ Fri, 10 Dec 2021 18:55:38: #2 alternative fragment length(s) may be 4,95 bps INFO @ Fri, 10 Dec 2021 18:55:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10_model.r WARNING @ Fri, 10 Dec 2021 18:55:38: #2 Since the d (95) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 18:55:38: #2 You may need to consider one of the other alternative d(s): 4,95 WARNING @ Fri, 10 Dec 2021 18:55:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 18:55:38: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:55:38: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:55:38: #2 number of paired peaks: 379 WARNING @ Fri, 10 Dec 2021 18:55:38: Fewer paired peaks (379) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 379 pairs to build model! INFO @ Fri, 10 Dec 2021 18:55:38: start model_add_line... INFO @ Fri, 10 Dec 2021 18:55:38: start X-correlation... INFO @ Fri, 10 Dec 2021 18:55:38: end of X-cor INFO @ Fri, 10 Dec 2021 18:55:38: #2 finished! INFO @ Fri, 10 Dec 2021 18:55:38: #2 predicted fragment length is 95 bps INFO @ Fri, 10 Dec 2021 18:55:38: #2 alternative fragment length(s) may be 4,95 bps INFO @ Fri, 10 Dec 2021 18:55:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20_model.r WARNING @ Fri, 10 Dec 2021 18:55:38: #2 Since the d (95) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 18:55:38: #2 You may need to consider one of the other alternative d(s): 4,95 WARNING @ Fri, 10 Dec 2021 18:55:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 18:55:38: #3 Call peaks... INFO @ Fri, 10 Dec 2021 18:55:38: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 18:56:29: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:56:30: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:56:31: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 18:56:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05_peaks.xls INFO @ Fri, 10 Dec 2021 18:56:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:56:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.05_summits.bed INFO @ Fri, 10 Dec 2021 18:56:55: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (12886 records, 4 fields): 15 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 18:56:57: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10_peaks.xls INFO @ Fri, 10 Dec 2021 18:56:57: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:56:57: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.10_summits.bed INFO @ Fri, 10 Dec 2021 18:56:57: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (9023 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 18:56:58: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20_peaks.xls INFO @ Fri, 10 Dec 2021 18:56:58: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 18:56:58: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978821/ERX3978821.20_summits.bed INFO @ Fri, 10 Dec 2021 18:56:58: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (3902 records, 4 fields): 6 millis CompletedMACS2peakCalling