Job ID = 14168387 SRX = ERX3978747 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 16294739 spots for ERR3975758/ERR3975758.sra Written 16294739 spots for ERR3975758/ERR3975758.sra Read 27936590 spots for ERR3975790/ERR3975790.sra Written 27936590 spots for ERR3975790/ERR3975790.sra fastq に変換しました。 bowtie でマッピング中... Your job 14169782 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:11:23 44231329 reads; of these: 44231329 (100.00%) were paired; of these: 18432127 (41.67%) aligned concordantly 0 times 10128176 (22.90%) aligned concordantly exactly 1 time 15671026 (35.43%) aligned concordantly >1 times ---- 18432127 pairs aligned concordantly 0 times; of these: 3117174 (16.91%) aligned discordantly 1 time ---- 15314953 pairs aligned 0 times concordantly or discordantly; of these: 30629906 mates make up the pairs; of these: 16379532 (53.48%) aligned 0 times 798647 (2.61%) aligned exactly 1 time 13451727 (43.92%) aligned >1 times 81.48% overall alignment rate Time searching: 01:11:23 Overall time: 01:11:23 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 14402548 / 28638152 = 0.5029 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 19:54:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 19:54:07: #1 read tag files... INFO @ Fri, 10 Dec 2021 19:54:07: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 19:54:13: 1000000 INFO @ Fri, 10 Dec 2021 19:54:19: 2000000 INFO @ Fri, 10 Dec 2021 19:54:25: 3000000 INFO @ Fri, 10 Dec 2021 19:54:31: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 19:54:37: 5000000 INFO @ Fri, 10 Dec 2021 19:54:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 19:54:37: #1 read tag files... INFO @ Fri, 10 Dec 2021 19:54:37: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 19:54:43: 6000000 INFO @ Fri, 10 Dec 2021 19:54:44: 1000000 INFO @ Fri, 10 Dec 2021 19:54:49: 7000000 INFO @ Fri, 10 Dec 2021 19:54:50: 2000000 INFO @ Fri, 10 Dec 2021 19:54:55: 8000000 INFO @ Fri, 10 Dec 2021 19:54:56: 3000000 INFO @ Fri, 10 Dec 2021 19:55:02: 9000000 INFO @ Fri, 10 Dec 2021 19:55:02: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 19:55:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 19:55:07: #1 read tag files... INFO @ Fri, 10 Dec 2021 19:55:07: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 19:55:08: 10000000 INFO @ Fri, 10 Dec 2021 19:55:09: 5000000 INFO @ Fri, 10 Dec 2021 19:55:14: 11000000 INFO @ Fri, 10 Dec 2021 19:55:15: 6000000 INFO @ Fri, 10 Dec 2021 19:55:15: 1000000 INFO @ Fri, 10 Dec 2021 19:55:21: 12000000 INFO @ Fri, 10 Dec 2021 19:55:22: 7000000 INFO @ Fri, 10 Dec 2021 19:55:24: 2000000 INFO @ Fri, 10 Dec 2021 19:55:28: 13000000 INFO @ Fri, 10 Dec 2021 19:55:28: 8000000 INFO @ Fri, 10 Dec 2021 19:55:32: 3000000 INFO @ Fri, 10 Dec 2021 19:55:34: 14000000 INFO @ Fri, 10 Dec 2021 19:55:35: 9000000 INFO @ Fri, 10 Dec 2021 19:55:40: 4000000 INFO @ Fri, 10 Dec 2021 19:55:41: 15000000 INFO @ Fri, 10 Dec 2021 19:55:41: 10000000 INFO @ Fri, 10 Dec 2021 19:55:47: 16000000 INFO @ Fri, 10 Dec 2021 19:55:48: 5000000 INFO @ Fri, 10 Dec 2021 19:55:48: 11000000 INFO @ Fri, 10 Dec 2021 19:55:54: 17000000 INFO @ Fri, 10 Dec 2021 19:55:54: 12000000 INFO @ Fri, 10 Dec 2021 19:55:56: 6000000 INFO @ Fri, 10 Dec 2021 19:56:00: 18000000 INFO @ Fri, 10 Dec 2021 19:56:01: 13000000 INFO @ Fri, 10 Dec 2021 19:56:04: 7000000 INFO @ Fri, 10 Dec 2021 19:56:07: 19000000 INFO @ Fri, 10 Dec 2021 19:56:08: 14000000 INFO @ Fri, 10 Dec 2021 19:56:12: 8000000 INFO @ Fri, 10 Dec 2021 19:56:13: 20000000 INFO @ Fri, 10 Dec 2021 19:56:14: 15000000 INFO @ Fri, 10 Dec 2021 19:56:20: 21000000 INFO @ Fri, 10 Dec 2021 19:56:20: 9000000 INFO @ Fri, 10 Dec 2021 19:56:21: 16000000 INFO @ Fri, 10 Dec 2021 19:56:26: 22000000 INFO @ Fri, 10 Dec 2021 19:56:28: 17000000 INFO @ Fri, 10 Dec 2021 19:56:28: 10000000 INFO @ Fri, 10 Dec 2021 19:56:32: 23000000 INFO @ Fri, 10 Dec 2021 19:56:34: 18000000 INFO @ Fri, 10 Dec 2021 19:56:36: 11000000 INFO @ Fri, 10 Dec 2021 19:56:38: 24000000 INFO @ Fri, 10 Dec 2021 19:56:41: 19000000 INFO @ Fri, 10 Dec 2021 19:56:44: 25000000 INFO @ Fri, 10 Dec 2021 19:56:44: 12000000 INFO @ Fri, 10 Dec 2021 19:56:47: 20000000 INFO @ Fri, 10 Dec 2021 19:56:50: 26000000 INFO @ Fri, 10 Dec 2021 19:56:52: 13000000 INFO @ Fri, 10 Dec 2021 19:56:54: 21000000 INFO @ Fri, 10 Dec 2021 19:56:56: 27000000 INFO @ Fri, 10 Dec 2021 19:57:00: 22000000 INFO @ Fri, 10 Dec 2021 19:57:00: 14000000 INFO @ Fri, 10 Dec 2021 19:57:02: 28000000 INFO @ Fri, 10 Dec 2021 19:57:06: 23000000 INFO @ Fri, 10 Dec 2021 19:57:08: 29000000 INFO @ Fri, 10 Dec 2021 19:57:09: 15000000 INFO @ Fri, 10 Dec 2021 19:57:12: 24000000 INFO @ Fri, 10 Dec 2021 19:57:14: 30000000 INFO @ Fri, 10 Dec 2021 19:57:17: 16000000 INFO @ Fri, 10 Dec 2021 19:57:18: 25000000 INFO @ Fri, 10 Dec 2021 19:57:20: 31000000 INFO @ Fri, 10 Dec 2021 19:57:24: 26000000 INFO @ Fri, 10 Dec 2021 19:57:25: 17000000 INFO @ Fri, 10 Dec 2021 19:57:26: 32000000 INFO @ Fri, 10 Dec 2021 19:57:30: 27000000 INFO @ Fri, 10 Dec 2021 19:57:32: 33000000 INFO @ Fri, 10 Dec 2021 19:57:33: 18000000 INFO @ Fri, 10 Dec 2021 19:57:36: 28000000 INFO @ Fri, 10 Dec 2021 19:57:38: 34000000 INFO @ Fri, 10 Dec 2021 19:57:41: 19000000 INFO @ Fri, 10 Dec 2021 19:57:42: 29000000 INFO @ Fri, 10 Dec 2021 19:57:44: 35000000 INFO @ Fri, 10 Dec 2021 19:57:48: 30000000 INFO @ Fri, 10 Dec 2021 19:57:49: 20000000 INFO @ Fri, 10 Dec 2021 19:57:50: 36000000 INFO @ Fri, 10 Dec 2021 19:57:55: 31000000 INFO @ Fri, 10 Dec 2021 19:57:56: 37000000 INFO @ Fri, 10 Dec 2021 19:57:57: 21000000 INFO @ Fri, 10 Dec 2021 19:58:01: 32000000 INFO @ Fri, 10 Dec 2021 19:58:03: 38000000 INFO @ Fri, 10 Dec 2021 19:58:05: 22000000 INFO @ Fri, 10 Dec 2021 19:58:07: 33000000 INFO @ Fri, 10 Dec 2021 19:58:09: 39000000 INFO @ Fri, 10 Dec 2021 19:58:12: 23000000 INFO @ Fri, 10 Dec 2021 19:58:13: 34000000 INFO @ Fri, 10 Dec 2021 19:58:15: 40000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 19:58:19: 35000000 INFO @ Fri, 10 Dec 2021 19:58:20: 24000000 INFO @ Fri, 10 Dec 2021 19:58:22: 41000000 INFO @ Fri, 10 Dec 2021 19:58:25: 36000000 INFO @ Fri, 10 Dec 2021 19:58:27: 25000000 INFO @ Fri, 10 Dec 2021 19:58:28: 42000000 INFO @ Fri, 10 Dec 2021 19:58:31: 37000000 INFO @ Fri, 10 Dec 2021 19:58:35: 43000000 INFO @ Fri, 10 Dec 2021 19:58:35: 26000000 INFO @ Fri, 10 Dec 2021 19:58:37: #1 tag size is determined as 125 bps INFO @ Fri, 10 Dec 2021 19:58:37: #1 tag size = 125 INFO @ Fri, 10 Dec 2021 19:58:37: #1 total tags in treatment: 11745030 INFO @ Fri, 10 Dec 2021 19:58:37: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 19:58:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 19:58:37: #1 tags after filtering in treatment: 8643784 INFO @ Fri, 10 Dec 2021 19:58:37: #1 Redundant rate of treatment: 0.26 INFO @ Fri, 10 Dec 2021 19:58:37: #1 finished! INFO @ Fri, 10 Dec 2021 19:58:37: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 19:58:37: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 19:58:37: 38000000 INFO @ Fri, 10 Dec 2021 19:58:38: #2 number of paired peaks: 2068 INFO @ Fri, 10 Dec 2021 19:58:38: start model_add_line... INFO @ Fri, 10 Dec 2021 19:58:38: start X-correlation... INFO @ Fri, 10 Dec 2021 19:58:38: end of X-cor INFO @ Fri, 10 Dec 2021 19:58:38: #2 finished! INFO @ Fri, 10 Dec 2021 19:58:38: #2 predicted fragment length is 184 bps INFO @ Fri, 10 Dec 2021 19:58:38: #2 alternative fragment length(s) may be 184 bps INFO @ Fri, 10 Dec 2021 19:58:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05_model.r WARNING @ Fri, 10 Dec 2021 19:58:38: #2 Since the d (184) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 19:58:38: #2 You may need to consider one of the other alternative d(s): 184 WARNING @ Fri, 10 Dec 2021 19:58:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 19:58:38: #3 Call peaks... INFO @ Fri, 10 Dec 2021 19:58:38: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 19:58:43: 27000000 INFO @ Fri, 10 Dec 2021 19:58:43: 39000000 INFO @ Fri, 10 Dec 2021 19:58:50: 40000000 INFO @ Fri, 10 Dec 2021 19:58:50: 28000000 INFO @ Fri, 10 Dec 2021 19:58:56: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 19:58:56: 41000000 INFO @ Fri, 10 Dec 2021 19:58:58: 29000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 19:59:03: 42000000 INFO @ Fri, 10 Dec 2021 19:59:05: 30000000 INFO @ Fri, 10 Dec 2021 19:59:06: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05_peaks.xls INFO @ Fri, 10 Dec 2021 19:59:06: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 19:59:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.05_summits.bed INFO @ Fri, 10 Dec 2021 19:59:06: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (7917 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 19:59:09: 43000000 INFO @ Fri, 10 Dec 2021 19:59:11: #1 tag size is determined as 125 bps INFO @ Fri, 10 Dec 2021 19:59:11: #1 tag size = 125 INFO @ Fri, 10 Dec 2021 19:59:11: #1 total tags in treatment: 11745030 INFO @ Fri, 10 Dec 2021 19:59:11: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 19:59:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 19:59:11: #1 tags after filtering in treatment: 8643784 INFO @ Fri, 10 Dec 2021 19:59:11: #1 Redundant rate of treatment: 0.26 INFO @ Fri, 10 Dec 2021 19:59:11: #1 finished! INFO @ Fri, 10 Dec 2021 19:59:11: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 19:59:11: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 19:59:12: #2 number of paired peaks: 2068 INFO @ Fri, 10 Dec 2021 19:59:12: start model_add_line... INFO @ Fri, 10 Dec 2021 19:59:12: start X-correlation... INFO @ Fri, 10 Dec 2021 19:59:12: end of X-cor INFO @ Fri, 10 Dec 2021 19:59:12: #2 finished! INFO @ Fri, 10 Dec 2021 19:59:12: #2 predicted fragment length is 184 bps INFO @ Fri, 10 Dec 2021 19:59:12: #2 alternative fragment length(s) may be 184 bps INFO @ Fri, 10 Dec 2021 19:59:12: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10_model.r WARNING @ Fri, 10 Dec 2021 19:59:12: #2 Since the d (184) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 19:59:12: #2 You may need to consider one of the other alternative d(s): 184 WARNING @ Fri, 10 Dec 2021 19:59:12: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 19:59:12: #3 Call peaks... INFO @ Fri, 10 Dec 2021 19:59:12: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 19:59:13: 31000000 INFO @ Fri, 10 Dec 2021 19:59:20: 32000000 INFO @ Fri, 10 Dec 2021 19:59:28: 33000000 INFO @ Fri, 10 Dec 2021 19:59:31: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 19:59:35: 34000000 INFO @ Fri, 10 Dec 2021 19:59:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10_peaks.xls INFO @ Fri, 10 Dec 2021 19:59:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 19:59:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.10_summits.bed INFO @ Fri, 10 Dec 2021 19:59:41: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (4419 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 19:59:42: 35000000 INFO @ Fri, 10 Dec 2021 19:59:49: 36000000 INFO @ Fri, 10 Dec 2021 19:59:57: 37000000 INFO @ Fri, 10 Dec 2021 20:00:04: 38000000 INFO @ Fri, 10 Dec 2021 20:00:12: 39000000 INFO @ Fri, 10 Dec 2021 20:00:19: 40000000 INFO @ Fri, 10 Dec 2021 20:00:27: 41000000 INFO @ Fri, 10 Dec 2021 20:00:34: 42000000 INFO @ Fri, 10 Dec 2021 20:00:42: 43000000 INFO @ Fri, 10 Dec 2021 20:00:44: #1 tag size is determined as 125 bps INFO @ Fri, 10 Dec 2021 20:00:44: #1 tag size = 125 INFO @ Fri, 10 Dec 2021 20:00:44: #1 total tags in treatment: 11745030 INFO @ Fri, 10 Dec 2021 20:00:44: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 20:00:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 20:00:44: #1 tags after filtering in treatment: 8643784 INFO @ Fri, 10 Dec 2021 20:00:44: #1 Redundant rate of treatment: 0.26 INFO @ Fri, 10 Dec 2021 20:00:44: #1 finished! INFO @ Fri, 10 Dec 2021 20:00:44: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 20:00:44: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 20:00:45: #2 number of paired peaks: 2068 INFO @ Fri, 10 Dec 2021 20:00:45: start model_add_line... INFO @ Fri, 10 Dec 2021 20:00:45: start X-correlation... INFO @ Fri, 10 Dec 2021 20:00:45: end of X-cor INFO @ Fri, 10 Dec 2021 20:00:45: #2 finished! INFO @ Fri, 10 Dec 2021 20:00:45: #2 predicted fragment length is 184 bps INFO @ Fri, 10 Dec 2021 20:00:45: #2 alternative fragment length(s) may be 184 bps INFO @ Fri, 10 Dec 2021 20:00:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20_model.r WARNING @ Fri, 10 Dec 2021 20:00:45: #2 Since the d (184) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 10 Dec 2021 20:00:45: #2 You may need to consider one of the other alternative d(s): 184 WARNING @ Fri, 10 Dec 2021 20:00:45: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 10 Dec 2021 20:00:45: #3 Call peaks... INFO @ Fri, 10 Dec 2021 20:00:45: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 20:01:04: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 20:01:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20_peaks.xls INFO @ Fri, 10 Dec 2021 20:01:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 20:01:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/ERX3978747/ERX3978747.20_summits.bed INFO @ Fri, 10 Dec 2021 20:01:14: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (1576 records, 4 fields): 3 millis CompletedMACS2peakCalling