Job ID = 14157898 SRX = SRX8948251 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 89226638 spots for SRR12453813/SRR12453813.sra Written 89226638 spots for SRR12453813/SRR12453813.sra fastq に変換しました。 bowtie でマッピング中... Your job 14160707 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:08:47 89226638 reads; of these: 89226638 (100.00%) were paired; of these: 40183526 (45.04%) aligned concordantly 0 times 41856714 (46.91%) aligned concordantly exactly 1 time 7186398 (8.05%) aligned concordantly >1 times ---- 40183526 pairs aligned concordantly 0 times; of these: 12637623 (31.45%) aligned discordantly 1 time ---- 27545903 pairs aligned 0 times concordantly or discordantly; of these: 55091806 mates make up the pairs; of these: 51322387 (93.16%) aligned 0 times 1429851 (2.60%) aligned exactly 1 time 2339568 (4.25%) aligned >1 times 71.24% overall alignment rate Time searching: 02:08:48 Overall time: 02:08:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 96 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 16730055 / 61174275 = 0.2735 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 04:01:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 04:01:14: #1 read tag files... INFO @ Thu, 09 Dec 2021 04:01:14: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 04:01:21: 1000000 INFO @ Thu, 09 Dec 2021 04:01:29: 2000000 INFO @ Thu, 09 Dec 2021 04:01:36: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 04:01:43: 4000000 INFO @ Thu, 09 Dec 2021 04:01:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 04:01:44: #1 read tag files... INFO @ Thu, 09 Dec 2021 04:01:44: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 04:01:51: 5000000 INFO @ Thu, 09 Dec 2021 04:01:52: 1000000 INFO @ Thu, 09 Dec 2021 04:01:59: 6000000 INFO @ Thu, 09 Dec 2021 04:02:00: 2000000 INFO @ Thu, 09 Dec 2021 04:02:07: 7000000 INFO @ Thu, 09 Dec 2021 04:02:08: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 04:02:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 04:02:14: #1 read tag files... INFO @ Thu, 09 Dec 2021 04:02:14: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 04:02:15: 8000000 INFO @ Thu, 09 Dec 2021 04:02:16: 4000000 INFO @ Thu, 09 Dec 2021 04:02:23: 1000000 INFO @ Thu, 09 Dec 2021 04:02:23: 9000000 INFO @ Thu, 09 Dec 2021 04:02:24: 5000000 INFO @ Thu, 09 Dec 2021 04:02:31: 2000000 INFO @ Thu, 09 Dec 2021 04:02:32: 10000000 INFO @ Thu, 09 Dec 2021 04:02:32: 6000000 INFO @ Thu, 09 Dec 2021 04:02:40: 3000000 INFO @ Thu, 09 Dec 2021 04:02:40: 11000000 INFO @ Thu, 09 Dec 2021 04:02:40: 7000000 INFO @ Thu, 09 Dec 2021 04:02:48: 4000000 INFO @ Thu, 09 Dec 2021 04:02:48: 8000000 INFO @ Thu, 09 Dec 2021 04:02:49: 12000000 INFO @ Thu, 09 Dec 2021 04:02:57: 9000000 INFO @ Thu, 09 Dec 2021 04:02:57: 5000000 INFO @ Thu, 09 Dec 2021 04:02:57: 13000000 INFO @ Thu, 09 Dec 2021 04:03:05: 10000000 INFO @ Thu, 09 Dec 2021 04:03:05: 6000000 INFO @ Thu, 09 Dec 2021 04:03:06: 14000000 INFO @ Thu, 09 Dec 2021 04:03:13: 11000000 INFO @ Thu, 09 Dec 2021 04:03:13: 7000000 INFO @ Thu, 09 Dec 2021 04:03:14: 15000000 INFO @ Thu, 09 Dec 2021 04:03:21: 12000000 INFO @ Thu, 09 Dec 2021 04:03:22: 8000000 INFO @ Thu, 09 Dec 2021 04:03:22: 16000000 INFO @ Thu, 09 Dec 2021 04:03:29: 13000000 INFO @ Thu, 09 Dec 2021 04:03:30: 9000000 INFO @ Thu, 09 Dec 2021 04:03:31: 17000000 INFO @ Thu, 09 Dec 2021 04:03:37: 14000000 INFO @ Thu, 09 Dec 2021 04:03:38: 10000000 INFO @ Thu, 09 Dec 2021 04:03:39: 18000000 INFO @ Thu, 09 Dec 2021 04:03:44: 15000000 INFO @ Thu, 09 Dec 2021 04:03:47: 11000000 INFO @ Thu, 09 Dec 2021 04:03:47: 19000000 INFO @ Thu, 09 Dec 2021 04:03:52: 16000000 INFO @ Thu, 09 Dec 2021 04:03:55: 12000000 INFO @ Thu, 09 Dec 2021 04:03:55: 20000000 INFO @ Thu, 09 Dec 2021 04:04:00: 17000000 INFO @ Thu, 09 Dec 2021 04:04:04: 13000000 INFO @ Thu, 09 Dec 2021 04:04:04: 21000000 INFO @ Thu, 09 Dec 2021 04:04:08: 18000000 INFO @ Thu, 09 Dec 2021 04:04:12: 14000000 INFO @ Thu, 09 Dec 2021 04:04:12: 22000000 INFO @ Thu, 09 Dec 2021 04:04:16: 19000000 INFO @ Thu, 09 Dec 2021 04:04:20: 15000000 INFO @ Thu, 09 Dec 2021 04:04:20: 23000000 INFO @ Thu, 09 Dec 2021 04:04:24: 20000000 INFO @ Thu, 09 Dec 2021 04:04:28: 16000000 INFO @ Thu, 09 Dec 2021 04:04:28: 24000000 INFO @ Thu, 09 Dec 2021 04:04:32: 21000000 INFO @ Thu, 09 Dec 2021 04:04:37: 17000000 INFO @ Thu, 09 Dec 2021 04:04:37: 25000000 INFO @ Thu, 09 Dec 2021 04:04:40: 22000000 INFO @ Thu, 09 Dec 2021 04:04:45: 18000000 INFO @ Thu, 09 Dec 2021 04:04:45: 26000000 INFO @ Thu, 09 Dec 2021 04:04:48: 23000000 INFO @ Thu, 09 Dec 2021 04:04:53: 19000000 INFO @ Thu, 09 Dec 2021 04:04:53: 27000000 INFO @ Thu, 09 Dec 2021 04:04:56: 24000000 INFO @ Thu, 09 Dec 2021 04:05:01: 20000000 INFO @ Thu, 09 Dec 2021 04:05:01: 28000000 INFO @ Thu, 09 Dec 2021 04:05:04: 25000000 INFO @ Thu, 09 Dec 2021 04:05:09: 21000000 INFO @ Thu, 09 Dec 2021 04:05:09: 29000000 INFO @ Thu, 09 Dec 2021 04:05:12: 26000000 INFO @ Thu, 09 Dec 2021 04:05:17: 22000000 INFO @ Thu, 09 Dec 2021 04:05:18: 30000000 INFO @ Thu, 09 Dec 2021 04:05:20: 27000000 INFO @ Thu, 09 Dec 2021 04:05:26: 23000000 INFO @ Thu, 09 Dec 2021 04:05:26: 31000000 INFO @ Thu, 09 Dec 2021 04:05:28: 28000000 INFO @ Thu, 09 Dec 2021 04:05:34: 24000000 INFO @ Thu, 09 Dec 2021 04:05:34: 32000000 INFO @ Thu, 09 Dec 2021 04:05:36: 29000000 INFO @ Thu, 09 Dec 2021 04:05:42: 25000000 INFO @ Thu, 09 Dec 2021 04:05:42: 33000000 INFO @ Thu, 09 Dec 2021 04:05:43: 30000000 INFO @ Thu, 09 Dec 2021 04:05:50: 26000000 INFO @ Thu, 09 Dec 2021 04:05:50: 34000000 INFO @ Thu, 09 Dec 2021 04:05:51: 31000000 INFO @ Thu, 09 Dec 2021 04:05:58: 27000000 INFO @ Thu, 09 Dec 2021 04:05:58: 35000000 INFO @ Thu, 09 Dec 2021 04:05:59: 32000000 INFO @ Thu, 09 Dec 2021 04:06:07: 28000000 INFO @ Thu, 09 Dec 2021 04:06:07: 36000000 INFO @ Thu, 09 Dec 2021 04:06:07: 33000000 INFO @ Thu, 09 Dec 2021 04:06:15: 29000000 INFO @ Thu, 09 Dec 2021 04:06:15: 37000000 INFO @ Thu, 09 Dec 2021 04:06:15: 34000000 INFO @ Thu, 09 Dec 2021 04:06:23: 30000000 INFO @ Thu, 09 Dec 2021 04:06:23: 38000000 INFO @ Thu, 09 Dec 2021 04:06:23: 35000000 INFO @ Thu, 09 Dec 2021 04:06:31: 36000000 INFO @ Thu, 09 Dec 2021 04:06:31: 31000000 INFO @ Thu, 09 Dec 2021 04:06:31: 39000000 INFO @ Thu, 09 Dec 2021 04:06:39: 37000000 INFO @ Thu, 09 Dec 2021 04:06:39: 32000000 INFO @ Thu, 09 Dec 2021 04:06:39: 40000000 INFO @ Thu, 09 Dec 2021 04:06:47: 38000000 INFO @ Thu, 09 Dec 2021 04:06:47: 33000000 INFO @ Thu, 09 Dec 2021 04:06:47: 41000000 INFO @ Thu, 09 Dec 2021 04:06:55: 39000000 INFO @ Thu, 09 Dec 2021 04:06:56: 34000000 INFO @ Thu, 09 Dec 2021 04:06:56: 42000000 INFO @ Thu, 09 Dec 2021 04:07:02: 40000000 INFO @ Thu, 09 Dec 2021 04:07:04: 35000000 INFO @ Thu, 09 Dec 2021 04:07:04: 43000000 INFO @ Thu, 09 Dec 2021 04:07:10: 41000000 INFO @ Thu, 09 Dec 2021 04:07:12: 36000000 INFO @ Thu, 09 Dec 2021 04:07:12: 44000000 INFO @ Thu, 09 Dec 2021 04:07:18: 42000000 INFO @ Thu, 09 Dec 2021 04:07:20: 37000000 INFO @ Thu, 09 Dec 2021 04:07:20: 45000000 INFO @ Thu, 09 Dec 2021 04:07:26: 43000000 INFO @ Thu, 09 Dec 2021 04:07:28: 38000000 INFO @ Thu, 09 Dec 2021 04:07:28: 46000000 INFO @ Thu, 09 Dec 2021 04:07:34: 44000000 INFO @ Thu, 09 Dec 2021 04:07:36: 39000000 INFO @ Thu, 09 Dec 2021 04:07:36: 47000000 INFO @ Thu, 09 Dec 2021 04:07:42: 45000000 INFO @ Thu, 09 Dec 2021 04:07:44: 40000000 INFO @ Thu, 09 Dec 2021 04:07:44: 48000000 INFO @ Thu, 09 Dec 2021 04:07:50: 46000000 INFO @ Thu, 09 Dec 2021 04:07:52: 41000000 INFO @ Thu, 09 Dec 2021 04:07:53: 49000000 INFO @ Thu, 09 Dec 2021 04:07:57: 47000000 INFO @ Thu, 09 Dec 2021 04:08:01: 42000000 INFO @ Thu, 09 Dec 2021 04:08:01: 50000000 INFO @ Thu, 09 Dec 2021 04:08:05: 48000000 INFO @ Thu, 09 Dec 2021 04:08:09: 43000000 INFO @ Thu, 09 Dec 2021 04:08:09: 51000000 INFO @ Thu, 09 Dec 2021 04:08:13: 49000000 INFO @ Thu, 09 Dec 2021 04:08:17: 44000000 INFO @ Thu, 09 Dec 2021 04:08:17: 52000000 INFO @ Thu, 09 Dec 2021 04:08:21: 50000000 INFO @ Thu, 09 Dec 2021 04:08:25: 45000000 INFO @ Thu, 09 Dec 2021 04:08:25: 53000000 INFO @ Thu, 09 Dec 2021 04:08:29: 51000000 INFO @ Thu, 09 Dec 2021 04:08:34: 46000000 INFO @ Thu, 09 Dec 2021 04:08:34: 54000000 INFO @ Thu, 09 Dec 2021 04:08:37: 52000000 INFO @ Thu, 09 Dec 2021 04:08:42: 47000000 INFO @ Thu, 09 Dec 2021 04:08:42: 55000000 INFO @ Thu, 09 Dec 2021 04:08:45: 53000000 INFO @ Thu, 09 Dec 2021 04:08:50: 48000000 INFO @ Thu, 09 Dec 2021 04:08:50: 56000000 INFO @ Thu, 09 Dec 2021 04:08:53: 54000000 INFO @ Thu, 09 Dec 2021 04:08:58: 49000000 INFO @ Thu, 09 Dec 2021 04:08:58: 57000000 INFO @ Thu, 09 Dec 2021 04:09:01: 55000000 INFO @ Thu, 09 Dec 2021 04:09:07: 50000000 INFO @ Thu, 09 Dec 2021 04:09:07: 58000000 INFO @ Thu, 09 Dec 2021 04:09:09: 56000000 INFO @ Thu, 09 Dec 2021 04:09:15: 51000000 INFO @ Thu, 09 Dec 2021 04:09:15: 59000000 INFO @ Thu, 09 Dec 2021 04:09:17: 57000000 INFO @ Thu, 09 Dec 2021 04:09:23: 52000000 INFO @ Thu, 09 Dec 2021 04:09:23: 60000000 INFO @ Thu, 09 Dec 2021 04:09:25: 58000000 INFO @ Thu, 09 Dec 2021 04:09:31: 53000000 INFO @ Thu, 09 Dec 2021 04:09:31: 61000000 INFO @ Thu, 09 Dec 2021 04:09:33: 59000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 09 Dec 2021 04:09:40: 54000000 INFO @ Thu, 09 Dec 2021 04:09:40: 62000000 INFO @ Thu, 09 Dec 2021 04:09:41: 60000000 INFO @ Thu, 09 Dec 2021 04:09:48: 55000000 INFO @ Thu, 09 Dec 2021 04:09:48: 63000000 INFO @ Thu, 09 Dec 2021 04:09:49: 61000000 INFO @ Thu, 09 Dec 2021 04:09:56: 56000000 INFO @ Thu, 09 Dec 2021 04:09:56: 64000000 INFO @ Thu, 09 Dec 2021 04:09:57: 62000000 INFO @ Thu, 09 Dec 2021 04:10:04: 57000000 INFO @ Thu, 09 Dec 2021 04:10:04: 65000000 INFO @ Thu, 09 Dec 2021 04:10:04: 63000000 INFO @ Thu, 09 Dec 2021 04:10:12: 58000000 INFO @ Thu, 09 Dec 2021 04:10:12: 64000000 INFO @ Thu, 09 Dec 2021 04:10:12: 66000000 INFO @ Thu, 09 Dec 2021 04:10:20: 65000000 INFO @ Thu, 09 Dec 2021 04:10:20: 59000000 INFO @ Thu, 09 Dec 2021 04:10:20: 67000000 INFO @ Thu, 09 Dec 2021 04:10:28: 66000000 INFO @ Thu, 09 Dec 2021 04:10:28: 60000000 INFO @ Thu, 09 Dec 2021 04:10:28: 68000000 INFO @ Thu, 09 Dec 2021 04:10:36: 67000000 INFO @ Thu, 09 Dec 2021 04:10:36: 61000000 INFO @ Thu, 09 Dec 2021 04:10:37: 69000000 INFO @ Thu, 09 Dec 2021 04:10:43: 68000000 INFO @ Thu, 09 Dec 2021 04:10:45: 62000000 INFO @ Thu, 09 Dec 2021 04:10:45: 70000000 INFO @ Thu, 09 Dec 2021 04:10:51: 69000000 INFO @ Thu, 09 Dec 2021 04:10:53: 63000000 INFO @ Thu, 09 Dec 2021 04:10:53: 71000000 INFO @ Thu, 09 Dec 2021 04:10:59: 70000000 INFO @ Thu, 09 Dec 2021 04:11:01: 64000000 INFO @ Thu, 09 Dec 2021 04:11:01: 72000000 INFO @ Thu, 09 Dec 2021 04:11:07: 71000000 INFO @ Thu, 09 Dec 2021 04:11:09: 65000000 INFO @ Thu, 09 Dec 2021 04:11:09: 73000000 BigWig に変換しました。 INFO @ Thu, 09 Dec 2021 04:11:14: 72000000 INFO @ Thu, 09 Dec 2021 04:11:17: 66000000 INFO @ Thu, 09 Dec 2021 04:11:17: 74000000 INFO @ Thu, 09 Dec 2021 04:11:22: 73000000 INFO @ Thu, 09 Dec 2021 04:11:25: 67000000 INFO @ Thu, 09 Dec 2021 04:11:25: 75000000 INFO @ Thu, 09 Dec 2021 04:11:30: 74000000 INFO @ Thu, 09 Dec 2021 04:11:33: 68000000 INFO @ Thu, 09 Dec 2021 04:11:33: 76000000 INFO @ Thu, 09 Dec 2021 04:11:38: 75000000 INFO @ Thu, 09 Dec 2021 04:11:41: 69000000 INFO @ Thu, 09 Dec 2021 04:11:41: 77000000 INFO @ Thu, 09 Dec 2021 04:11:46: 76000000 INFO @ Thu, 09 Dec 2021 04:11:49: 70000000 INFO @ Thu, 09 Dec 2021 04:11:50: 78000000 INFO @ Thu, 09 Dec 2021 04:11:53: 77000000 INFO @ Thu, 09 Dec 2021 04:11:57: 71000000 INFO @ Thu, 09 Dec 2021 04:11:58: 79000000 INFO @ Thu, 09 Dec 2021 04:12:01: 78000000 INFO @ Thu, 09 Dec 2021 04:12:06: 72000000 INFO @ Thu, 09 Dec 2021 04:12:06: 80000000 INFO @ Thu, 09 Dec 2021 04:12:09: 79000000 INFO @ Thu, 09 Dec 2021 04:12:14: 73000000 INFO @ Thu, 09 Dec 2021 04:12:14: 81000000 INFO @ Thu, 09 Dec 2021 04:12:17: 80000000 INFO @ Thu, 09 Dec 2021 04:12:22: 74000000 INFO @ Thu, 09 Dec 2021 04:12:22: 82000000 INFO @ Thu, 09 Dec 2021 04:12:25: 81000000 INFO @ Thu, 09 Dec 2021 04:12:30: 75000000 INFO @ Thu, 09 Dec 2021 04:12:30: 83000000 INFO @ Thu, 09 Dec 2021 04:12:33: 82000000 INFO @ Thu, 09 Dec 2021 04:12:39: 76000000 INFO @ Thu, 09 Dec 2021 04:12:39: 84000000 INFO @ Thu, 09 Dec 2021 04:12:41: 83000000 INFO @ Thu, 09 Dec 2021 04:12:47: 77000000 INFO @ Thu, 09 Dec 2021 04:12:47: 85000000 INFO @ Thu, 09 Dec 2021 04:12:49: 84000000 INFO @ Thu, 09 Dec 2021 04:12:55: 78000000 INFO @ Thu, 09 Dec 2021 04:12:55: 86000000 INFO @ Thu, 09 Dec 2021 04:12:57: 85000000 INFO @ Thu, 09 Dec 2021 04:13:04: 87000000 INFO @ Thu, 09 Dec 2021 04:13:04: 79000000 INFO @ Thu, 09 Dec 2021 04:13:05: 86000000 INFO @ Thu, 09 Dec 2021 04:13:12: 80000000 INFO @ Thu, 09 Dec 2021 04:13:12: 88000000 INFO @ Thu, 09 Dec 2021 04:13:13: 87000000 INFO @ Thu, 09 Dec 2021 04:13:20: 81000000 INFO @ Thu, 09 Dec 2021 04:13:20: 89000000 INFO @ Thu, 09 Dec 2021 04:13:21: 88000000 INFO @ Thu, 09 Dec 2021 04:13:29: 90000000 INFO @ Thu, 09 Dec 2021 04:13:29: 82000000 INFO @ Thu, 09 Dec 2021 04:13:29: 89000000 INFO @ Thu, 09 Dec 2021 04:13:37: 90000000 INFO @ Thu, 09 Dec 2021 04:13:37: 83000000 INFO @ Thu, 09 Dec 2021 04:13:37: 91000000 INFO @ Thu, 09 Dec 2021 04:13:45: 91000000 INFO @ Thu, 09 Dec 2021 04:13:46: 84000000 INFO @ Thu, 09 Dec 2021 04:13:46: 92000000 INFO @ Thu, 09 Dec 2021 04:13:53: 92000000 INFO @ Thu, 09 Dec 2021 04:13:54: 85000000 INFO @ Thu, 09 Dec 2021 04:13:54: 93000000 INFO @ Thu, 09 Dec 2021 04:14:00: #1 tag size is determined as 150 bps INFO @ Thu, 09 Dec 2021 04:14:00: #1 tag size = 150 INFO @ Thu, 09 Dec 2021 04:14:00: #1 total tags in treatment: 35022050 INFO @ Thu, 09 Dec 2021 04:14:00: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 04:14:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 04:14:00: #1 tags after filtering in treatment: 29735191 INFO @ Thu, 09 Dec 2021 04:14:00: #1 Redundant rate of treatment: 0.15 INFO @ Thu, 09 Dec 2021 04:14:00: #1 finished! INFO @ Thu, 09 Dec 2021 04:14:00: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 04:14:00: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 04:14:01: 93000000 INFO @ Thu, 09 Dec 2021 04:14:02: 86000000 INFO @ Thu, 09 Dec 2021 04:14:02: #2 number of paired peaks: 126 WARNING @ Thu, 09 Dec 2021 04:14:02: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Thu, 09 Dec 2021 04:14:02: start model_add_line... INFO @ Thu, 09 Dec 2021 04:14:02: start X-correlation... INFO @ Thu, 09 Dec 2021 04:14:03: end of X-cor INFO @ Thu, 09 Dec 2021 04:14:03: #2 finished! INFO @ Thu, 09 Dec 2021 04:14:03: #2 predicted fragment length is 139 bps INFO @ Thu, 09 Dec 2021 04:14:03: #2 alternative fragment length(s) may be 2,139,160 bps INFO @ Thu, 09 Dec 2021 04:14:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05_model.r WARNING @ Thu, 09 Dec 2021 04:14:03: #2 Since the d (139) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 09 Dec 2021 04:14:03: #2 You may need to consider one of the other alternative d(s): 2,139,160 WARNING @ Thu, 09 Dec 2021 04:14:03: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 09 Dec 2021 04:14:03: #3 Call peaks... INFO @ Thu, 09 Dec 2021 04:14:03: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 04:14:07: #1 tag size is determined as 150 bps INFO @ Thu, 09 Dec 2021 04:14:07: #1 tag size = 150 INFO @ Thu, 09 Dec 2021 04:14:07: #1 total tags in treatment: 35022050 INFO @ Thu, 09 Dec 2021 04:14:07: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 04:14:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 04:14:07: #1 tags after filtering in treatment: 29735191 INFO @ Thu, 09 Dec 2021 04:14:07: #1 Redundant rate of treatment: 0.15 INFO @ Thu, 09 Dec 2021 04:14:07: #1 finished! INFO @ Thu, 09 Dec 2021 04:14:07: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 04:14:07: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 04:14:09: #2 number of paired peaks: 126 WARNING @ Thu, 09 Dec 2021 04:14:09: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Thu, 09 Dec 2021 04:14:09: start model_add_line... INFO @ Thu, 09 Dec 2021 04:14:09: start X-correlation... INFO @ Thu, 09 Dec 2021 04:14:09: end of X-cor INFO @ Thu, 09 Dec 2021 04:14:09: #2 finished! INFO @ Thu, 09 Dec 2021 04:14:09: #2 predicted fragment length is 139 bps INFO @ Thu, 09 Dec 2021 04:14:09: #2 alternative fragment length(s) may be 2,139,160 bps INFO @ Thu, 09 Dec 2021 04:14:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10_model.r WARNING @ Thu, 09 Dec 2021 04:14:09: #2 Since the d (139) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 09 Dec 2021 04:14:09: #2 You may need to consider one of the other alternative d(s): 2,139,160 WARNING @ Thu, 09 Dec 2021 04:14:09: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 09 Dec 2021 04:14:09: #3 Call peaks... INFO @ Thu, 09 Dec 2021 04:14:09: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 04:14:10: 87000000 INFO @ Thu, 09 Dec 2021 04:14:17: 88000000 INFO @ Thu, 09 Dec 2021 04:14:24: 89000000 INFO @ Thu, 09 Dec 2021 04:14:31: 90000000 INFO @ Thu, 09 Dec 2021 04:14:38: 91000000 INFO @ Thu, 09 Dec 2021 04:14:45: 92000000 INFO @ Thu, 09 Dec 2021 04:14:48: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 04:14:53: 93000000 INFO @ Thu, 09 Dec 2021 04:14:55: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 04:14:57: #1 tag size is determined as 150 bps INFO @ Thu, 09 Dec 2021 04:14:57: #1 tag size = 150 INFO @ Thu, 09 Dec 2021 04:14:57: #1 total tags in treatment: 35022050 INFO @ Thu, 09 Dec 2021 04:14:57: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 04:14:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 04:14:58: #1 tags after filtering in treatment: 29735191 INFO @ Thu, 09 Dec 2021 04:14:58: #1 Redundant rate of treatment: 0.15 INFO @ Thu, 09 Dec 2021 04:14:58: #1 finished! INFO @ Thu, 09 Dec 2021 04:14:58: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 04:14:58: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 04:15:00: #2 number of paired peaks: 126 WARNING @ Thu, 09 Dec 2021 04:15:00: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Thu, 09 Dec 2021 04:15:00: start model_add_line... INFO @ Thu, 09 Dec 2021 04:15:00: start X-correlation... INFO @ Thu, 09 Dec 2021 04:15:00: end of X-cor INFO @ Thu, 09 Dec 2021 04:15:00: #2 finished! INFO @ Thu, 09 Dec 2021 04:15:00: #2 predicted fragment length is 139 bps INFO @ Thu, 09 Dec 2021 04:15:00: #2 alternative fragment length(s) may be 2,139,160 bps INFO @ Thu, 09 Dec 2021 04:15:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20_model.r WARNING @ Thu, 09 Dec 2021 04:15:00: #2 Since the d (139) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 09 Dec 2021 04:15:00: #2 You may need to consider one of the other alternative d(s): 2,139,160 WARNING @ Thu, 09 Dec 2021 04:15:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 09 Dec 2021 04:15:00: #3 Call peaks... INFO @ Thu, 09 Dec 2021 04:15:00: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 04:15:09: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05_peaks.xls INFO @ Thu, 09 Dec 2021 04:15:09: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 04:15:09: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.05_summits.bed INFO @ Thu, 09 Dec 2021 04:15:09: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (638 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 04:15:16: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10_peaks.xls INFO @ Thu, 09 Dec 2021 04:15:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 04:15:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.10_summits.bed INFO @ Thu, 09 Dec 2021 04:15:16: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (460 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 04:15:45: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 04:16:07: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20_peaks.xls INFO @ Thu, 09 Dec 2021 04:16:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 04:16:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8948251/SRX8948251.20_summits.bed INFO @ Thu, 09 Dec 2021 04:16:07: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (286 records, 4 fields): 2 millis CompletedMACS2peakCalling