Job ID = 14160434 SRX = SRX8582569 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 18934613 spots for SRR12054138/SRR12054138.sra Written 18934613 spots for SRR12054138/SRR12054138.sra Read 18779156 spots for SRR12054139/SRR12054139.sra Written 18779156 spots for SRR12054139/SRR12054139.sra fastq に変換しました。 bowtie でマッピング中... Your job 14160649 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:32:27 37713769 reads; of these: 37713769 (100.00%) were paired; of these: 2338166 (6.20%) aligned concordantly 0 times 30188701 (80.05%) aligned concordantly exactly 1 time 5186902 (13.75%) aligned concordantly >1 times ---- 2338166 pairs aligned concordantly 0 times; of these: 955046 (40.85%) aligned discordantly 1 time ---- 1383120 pairs aligned 0 times concordantly or discordantly; of these: 2766240 mates make up the pairs; of these: 1780353 (64.36%) aligned 0 times 576371 (20.84%) aligned exactly 1 time 409516 (14.80%) aligned >1 times 97.64% overall alignment rate Time searching: 00:32:27 Overall time: 00:32:27 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 10764692 / 36313625 = 0.2964 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:16:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:16:39: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:16:39: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:16:44: 1000000 INFO @ Thu, 09 Dec 2021 03:16:48: 2000000 INFO @ Thu, 09 Dec 2021 03:16:53: 3000000 INFO @ Thu, 09 Dec 2021 03:16:58: 4000000 INFO @ Thu, 09 Dec 2021 03:17:03: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:17:08: 6000000 INFO @ Thu, 09 Dec 2021 03:17:09: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:17:09: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:17:09: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:17:13: 7000000 INFO @ Thu, 09 Dec 2021 03:17:15: 1000000 INFO @ Thu, 09 Dec 2021 03:17:19: 8000000 INFO @ Thu, 09 Dec 2021 03:17:22: 2000000 INFO @ Thu, 09 Dec 2021 03:17:25: 9000000 INFO @ Thu, 09 Dec 2021 03:17:29: 3000000 INFO @ Thu, 09 Dec 2021 03:17:30: 10000000 INFO @ Thu, 09 Dec 2021 03:17:35: 4000000 INFO @ Thu, 09 Dec 2021 03:17:36: 11000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:17:39: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:17:39: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:17:39: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:17:42: 12000000 INFO @ Thu, 09 Dec 2021 03:17:42: 5000000 INFO @ Thu, 09 Dec 2021 03:17:45: 1000000 INFO @ Thu, 09 Dec 2021 03:17:48: 13000000 INFO @ Thu, 09 Dec 2021 03:17:49: 6000000 INFO @ Thu, 09 Dec 2021 03:17:52: 2000000 INFO @ Thu, 09 Dec 2021 03:17:54: 14000000 INFO @ Thu, 09 Dec 2021 03:17:56: 7000000 INFO @ Thu, 09 Dec 2021 03:17:59: 3000000 INFO @ Thu, 09 Dec 2021 03:17:59: 15000000 INFO @ Thu, 09 Dec 2021 03:18:02: 8000000 INFO @ Thu, 09 Dec 2021 03:18:05: 16000000 INFO @ Thu, 09 Dec 2021 03:18:06: 4000000 INFO @ Thu, 09 Dec 2021 03:18:09: 9000000 INFO @ Thu, 09 Dec 2021 03:18:11: 17000000 INFO @ Thu, 09 Dec 2021 03:18:12: 5000000 INFO @ Thu, 09 Dec 2021 03:18:16: 10000000 INFO @ Thu, 09 Dec 2021 03:18:17: 18000000 INFO @ Thu, 09 Dec 2021 03:18:19: 6000000 INFO @ Thu, 09 Dec 2021 03:18:23: 11000000 INFO @ Thu, 09 Dec 2021 03:18:23: 19000000 INFO @ Thu, 09 Dec 2021 03:18:26: 7000000 INFO @ Thu, 09 Dec 2021 03:18:28: 20000000 INFO @ Thu, 09 Dec 2021 03:18:29: 12000000 INFO @ Thu, 09 Dec 2021 03:18:32: 8000000 INFO @ Thu, 09 Dec 2021 03:18:34: 21000000 INFO @ Thu, 09 Dec 2021 03:18:36: 13000000 INFO @ Thu, 09 Dec 2021 03:18:39: 9000000 INFO @ Thu, 09 Dec 2021 03:18:40: 22000000 INFO @ Thu, 09 Dec 2021 03:18:43: 14000000 INFO @ Thu, 09 Dec 2021 03:18:46: 23000000 INFO @ Thu, 09 Dec 2021 03:18:46: 10000000 INFO @ Thu, 09 Dec 2021 03:18:49: 15000000 INFO @ Thu, 09 Dec 2021 03:18:51: 24000000 INFO @ Thu, 09 Dec 2021 03:18:52: 11000000 INFO @ Thu, 09 Dec 2021 03:18:56: 16000000 INFO @ Thu, 09 Dec 2021 03:18:57: 25000000 INFO @ Thu, 09 Dec 2021 03:18:59: 12000000 INFO @ Thu, 09 Dec 2021 03:19:03: 26000000 INFO @ Thu, 09 Dec 2021 03:19:03: 17000000 INFO @ Thu, 09 Dec 2021 03:19:06: 13000000 INFO @ Thu, 09 Dec 2021 03:19:09: 27000000 INFO @ Thu, 09 Dec 2021 03:19:10: 18000000 INFO @ Thu, 09 Dec 2021 03:19:12: 14000000 INFO @ Thu, 09 Dec 2021 03:19:15: 28000000 INFO @ Thu, 09 Dec 2021 03:19:17: 19000000 INFO @ Thu, 09 Dec 2021 03:19:19: 15000000 INFO @ Thu, 09 Dec 2021 03:19:21: 29000000 INFO @ Thu, 09 Dec 2021 03:19:23: 20000000 INFO @ Thu, 09 Dec 2021 03:19:26: 16000000 INFO @ Thu, 09 Dec 2021 03:19:26: 30000000 INFO @ Thu, 09 Dec 2021 03:19:30: 21000000 INFO @ Thu, 09 Dec 2021 03:19:32: 31000000 INFO @ Thu, 09 Dec 2021 03:19:32: 17000000 INFO @ Thu, 09 Dec 2021 03:19:37: 22000000 INFO @ Thu, 09 Dec 2021 03:19:38: 32000000 INFO @ Thu, 09 Dec 2021 03:19:39: 18000000 INFO @ Thu, 09 Dec 2021 03:19:43: 23000000 INFO @ Thu, 09 Dec 2021 03:19:44: 33000000 INFO @ Thu, 09 Dec 2021 03:19:46: 19000000 INFO @ Thu, 09 Dec 2021 03:19:49: 34000000 INFO @ Thu, 09 Dec 2021 03:19:50: 24000000 INFO @ Thu, 09 Dec 2021 03:19:53: 20000000 INFO @ Thu, 09 Dec 2021 03:19:55: 35000000 INFO @ Thu, 09 Dec 2021 03:19:57: 25000000 INFO @ Thu, 09 Dec 2021 03:19:59: 21000000 INFO @ Thu, 09 Dec 2021 03:20:01: 36000000 INFO @ Thu, 09 Dec 2021 03:20:04: 26000000 INFO @ Thu, 09 Dec 2021 03:20:06: 22000000 INFO @ Thu, 09 Dec 2021 03:20:06: 37000000 INFO @ Thu, 09 Dec 2021 03:20:10: 27000000 INFO @ Thu, 09 Dec 2021 03:20:12: 38000000 INFO @ Thu, 09 Dec 2021 03:20:13: 23000000 INFO @ Thu, 09 Dec 2021 03:20:17: 28000000 INFO @ Thu, 09 Dec 2021 03:20:18: 39000000 INFO @ Thu, 09 Dec 2021 03:20:20: 24000000 INFO @ Thu, 09 Dec 2021 03:20:23: 40000000 INFO @ Thu, 09 Dec 2021 03:20:24: 29000000 INFO @ Thu, 09 Dec 2021 03:20:26: 25000000 INFO @ Thu, 09 Dec 2021 03:20:29: 41000000 INFO @ Thu, 09 Dec 2021 03:20:31: 30000000 INFO @ Thu, 09 Dec 2021 03:20:33: 26000000 INFO @ Thu, 09 Dec 2021 03:20:35: 42000000 INFO @ Thu, 09 Dec 2021 03:20:37: 31000000 INFO @ Thu, 09 Dec 2021 03:20:40: 27000000 INFO @ Thu, 09 Dec 2021 03:20:40: 43000000 INFO @ Thu, 09 Dec 2021 03:20:44: 32000000 INFO @ Thu, 09 Dec 2021 03:20:46: 44000000 INFO @ Thu, 09 Dec 2021 03:20:46: 28000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 09 Dec 2021 03:20:51: 33000000 INFO @ Thu, 09 Dec 2021 03:20:52: 45000000 INFO @ Thu, 09 Dec 2021 03:20:53: 29000000 INFO @ Thu, 09 Dec 2021 03:20:58: 46000000 INFO @ Thu, 09 Dec 2021 03:20:58: 34000000 INFO @ Thu, 09 Dec 2021 03:21:00: 30000000 INFO @ Thu, 09 Dec 2021 03:21:03: 47000000 INFO @ Thu, 09 Dec 2021 03:21:04: 35000000 INFO @ Thu, 09 Dec 2021 03:21:07: 31000000 INFO @ Thu, 09 Dec 2021 03:21:09: 48000000 INFO @ Thu, 09 Dec 2021 03:21:11: 36000000 INFO @ Thu, 09 Dec 2021 03:21:13: 32000000 INFO @ Thu, 09 Dec 2021 03:21:15: 49000000 INFO @ Thu, 09 Dec 2021 03:21:18: 37000000 INFO @ Thu, 09 Dec 2021 03:21:20: 33000000 INFO @ Thu, 09 Dec 2021 03:21:20: 50000000 INFO @ Thu, 09 Dec 2021 03:21:24: 38000000 INFO @ Thu, 09 Dec 2021 03:21:26: 51000000 INFO @ Thu, 09 Dec 2021 03:21:27: 34000000 INFO @ Thu, 09 Dec 2021 03:21:31: 39000000 INFO @ Thu, 09 Dec 2021 03:21:32: 52000000 INFO @ Thu, 09 Dec 2021 03:21:33: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:21:33: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:21:33: #1 total tags in treatment: 24804124 INFO @ Thu, 09 Dec 2021 03:21:33: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:21:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:21:33: #1 tags after filtering in treatment: 21320123 INFO @ Thu, 09 Dec 2021 03:21:33: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:21:33: #1 finished! INFO @ Thu, 09 Dec 2021 03:21:33: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:21:33: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:21:33: 35000000 INFO @ Thu, 09 Dec 2021 03:21:35: #2 number of paired peaks: 289 WARNING @ Thu, 09 Dec 2021 03:21:35: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Thu, 09 Dec 2021 03:21:35: start model_add_line... INFO @ Thu, 09 Dec 2021 03:21:35: start X-correlation... INFO @ Thu, 09 Dec 2021 03:21:35: end of X-cor INFO @ Thu, 09 Dec 2021 03:21:35: #2 finished! INFO @ Thu, 09 Dec 2021 03:21:35: #2 predicted fragment length is 146 bps INFO @ Thu, 09 Dec 2021 03:21:35: #2 alternative fragment length(s) may be 3,146 bps INFO @ Thu, 09 Dec 2021 03:21:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05_model.r INFO @ Thu, 09 Dec 2021 03:21:35: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:21:35: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:21:37: 40000000 INFO @ Thu, 09 Dec 2021 03:21:40: 36000000 INFO @ Thu, 09 Dec 2021 03:21:44: 41000000 INFO @ Thu, 09 Dec 2021 03:21:46: 37000000 INFO @ Thu, 09 Dec 2021 03:21:50: 42000000 INFO @ Thu, 09 Dec 2021 03:21:53: 38000000 INFO @ Thu, 09 Dec 2021 03:21:57: 43000000 INFO @ Thu, 09 Dec 2021 03:21:59: 39000000 INFO @ Thu, 09 Dec 2021 03:22:04: 44000000 BigWig に変換しました。 INFO @ Thu, 09 Dec 2021 03:22:06: 40000000 INFO @ Thu, 09 Dec 2021 03:22:11: 45000000 INFO @ Thu, 09 Dec 2021 03:22:12: 41000000 INFO @ Thu, 09 Dec 2021 03:22:14: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:22:17: 46000000 INFO @ Thu, 09 Dec 2021 03:22:19: 42000000 INFO @ Thu, 09 Dec 2021 03:22:24: 47000000 INFO @ Thu, 09 Dec 2021 03:22:25: 43000000 INFO @ Thu, 09 Dec 2021 03:22:31: 48000000 INFO @ Thu, 09 Dec 2021 03:22:32: 44000000 INFO @ Thu, 09 Dec 2021 03:22:33: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05_peaks.xls INFO @ Thu, 09 Dec 2021 03:22:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:22:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.05_summits.bed INFO @ Thu, 09 Dec 2021 03:22:33: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (6719 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 03:22:37: 49000000 INFO @ Thu, 09 Dec 2021 03:22:39: 45000000 INFO @ Thu, 09 Dec 2021 03:22:44: 50000000 INFO @ Thu, 09 Dec 2021 03:22:45: 46000000 INFO @ Thu, 09 Dec 2021 03:22:51: 51000000 INFO @ Thu, 09 Dec 2021 03:22:52: 47000000 INFO @ Thu, 09 Dec 2021 03:22:58: 52000000 INFO @ Thu, 09 Dec 2021 03:22:59: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:22:59: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:22:59: #1 total tags in treatment: 24804124 INFO @ Thu, 09 Dec 2021 03:22:59: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:22:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:22:59: 48000000 INFO @ Thu, 09 Dec 2021 03:22:59: #1 tags after filtering in treatment: 21320123 INFO @ Thu, 09 Dec 2021 03:22:59: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:22:59: #1 finished! INFO @ Thu, 09 Dec 2021 03:22:59: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:22:59: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:23:00: #2 number of paired peaks: 289 WARNING @ Thu, 09 Dec 2021 03:23:00: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Thu, 09 Dec 2021 03:23:00: start model_add_line... INFO @ Thu, 09 Dec 2021 03:23:01: start X-correlation... INFO @ Thu, 09 Dec 2021 03:23:01: end of X-cor INFO @ Thu, 09 Dec 2021 03:23:01: #2 finished! INFO @ Thu, 09 Dec 2021 03:23:01: #2 predicted fragment length is 146 bps INFO @ Thu, 09 Dec 2021 03:23:01: #2 alternative fragment length(s) may be 3,146 bps INFO @ Thu, 09 Dec 2021 03:23:01: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10_model.r INFO @ Thu, 09 Dec 2021 03:23:01: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:23:01: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:23:05: 49000000 INFO @ Thu, 09 Dec 2021 03:23:11: 50000000 INFO @ Thu, 09 Dec 2021 03:23:17: 51000000 INFO @ Thu, 09 Dec 2021 03:23:24: 52000000 INFO @ Thu, 09 Dec 2021 03:23:25: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:23:25: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:23:25: #1 total tags in treatment: 24804124 INFO @ Thu, 09 Dec 2021 03:23:25: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:23:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:23:25: #1 tags after filtering in treatment: 21320123 INFO @ Thu, 09 Dec 2021 03:23:25: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:23:25: #1 finished! INFO @ Thu, 09 Dec 2021 03:23:25: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:23:25: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:23:26: #2 number of paired peaks: 289 WARNING @ Thu, 09 Dec 2021 03:23:26: Fewer paired peaks (289) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 289 pairs to build model! INFO @ Thu, 09 Dec 2021 03:23:26: start model_add_line... INFO @ Thu, 09 Dec 2021 03:23:27: start X-correlation... INFO @ Thu, 09 Dec 2021 03:23:27: end of X-cor INFO @ Thu, 09 Dec 2021 03:23:27: #2 finished! INFO @ Thu, 09 Dec 2021 03:23:27: #2 predicted fragment length is 146 bps INFO @ Thu, 09 Dec 2021 03:23:27: #2 alternative fragment length(s) may be 3,146 bps INFO @ Thu, 09 Dec 2021 03:23:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20_model.r INFO @ Thu, 09 Dec 2021 03:23:27: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:23:27: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:23:41: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:24:01: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10_peaks.xls INFO @ Thu, 09 Dec 2021 03:24:01: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:24:01: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.10_summits.bed INFO @ Thu, 09 Dec 2021 03:24:01: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (3994 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 03:24:09: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:24:28: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20_peaks.xls INFO @ Thu, 09 Dec 2021 03:24:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:24:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582569/SRX8582569.20_summits.bed INFO @ Thu, 09 Dec 2021 03:24:28: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (1848 records, 4 fields): 3 millis CompletedMACS2peakCalling