Job ID = 14160433 SRX = SRX8582568 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 17788805 spots for SRR12054136/SRR12054136.sra Written 17788805 spots for SRR12054136/SRR12054136.sra Read 17607263 spots for SRR12054137/SRR12054137.sra Written 17607263 spots for SRR12054137/SRR12054137.sra fastq に変換しました。 bowtie でマッピング中... Your job 14160674 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:39:55 35396068 reads; of these: 35396068 (100.00%) were paired; of these: 2996449 (8.47%) aligned concordantly 0 times 27593181 (77.96%) aligned concordantly exactly 1 time 4806438 (13.58%) aligned concordantly >1 times ---- 2996449 pairs aligned concordantly 0 times; of these: 1233981 (41.18%) aligned discordantly 1 time ---- 1762468 pairs aligned 0 times concordantly or discordantly; of these: 3524936 mates make up the pairs; of these: 2432960 (69.02%) aligned 0 times 589632 (16.73%) aligned exactly 1 time 502344 (14.25%) aligned >1 times 96.56% overall alignment rate Time searching: 00:39:56 Overall time: 00:39:56 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 9159553 / 33618127 = 0.2725 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:30:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:30:29: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:30:29: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:30:37: 1000000 INFO @ Thu, 09 Dec 2021 03:30:45: 2000000 INFO @ Thu, 09 Dec 2021 03:30:53: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:30:59: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:30:59: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:30:59: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:31:01: 4000000 INFO @ Thu, 09 Dec 2021 03:31:06: 1000000 INFO @ Thu, 09 Dec 2021 03:31:09: 5000000 INFO @ Thu, 09 Dec 2021 03:31:14: 2000000 INFO @ Thu, 09 Dec 2021 03:31:18: 6000000 INFO @ Thu, 09 Dec 2021 03:31:23: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 09 Dec 2021 03:31:26: 7000000 INFO @ Thu, 09 Dec 2021 03:31:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 09 Dec 2021 03:31:29: #1 read tag files... INFO @ Thu, 09 Dec 2021 03:31:29: #1 read treatment tags... INFO @ Thu, 09 Dec 2021 03:31:30: 4000000 INFO @ Thu, 09 Dec 2021 03:31:35: 8000000 INFO @ Thu, 09 Dec 2021 03:31:38: 1000000 INFO @ Thu, 09 Dec 2021 03:31:39: 5000000 INFO @ Thu, 09 Dec 2021 03:31:43: 9000000 INFO @ Thu, 09 Dec 2021 03:31:46: 2000000 INFO @ Thu, 09 Dec 2021 03:31:47: 6000000 INFO @ Thu, 09 Dec 2021 03:31:52: 10000000 INFO @ Thu, 09 Dec 2021 03:31:55: 7000000 INFO @ Thu, 09 Dec 2021 03:31:55: 3000000 INFO @ Thu, 09 Dec 2021 03:32:02: 11000000 INFO @ Thu, 09 Dec 2021 03:32:03: 8000000 INFO @ Thu, 09 Dec 2021 03:32:04: 4000000 INFO @ Thu, 09 Dec 2021 03:32:11: 12000000 INFO @ Thu, 09 Dec 2021 03:32:11: 9000000 INFO @ Thu, 09 Dec 2021 03:32:13: 5000000 INFO @ Thu, 09 Dec 2021 03:32:19: 10000000 INFO @ Thu, 09 Dec 2021 03:32:20: 13000000 INFO @ Thu, 09 Dec 2021 03:32:22: 6000000 INFO @ Thu, 09 Dec 2021 03:32:27: 11000000 INFO @ Thu, 09 Dec 2021 03:32:29: 14000000 INFO @ Thu, 09 Dec 2021 03:32:31: 7000000 INFO @ Thu, 09 Dec 2021 03:32:36: 12000000 INFO @ Thu, 09 Dec 2021 03:32:37: 15000000 INFO @ Thu, 09 Dec 2021 03:32:40: 8000000 INFO @ Thu, 09 Dec 2021 03:32:44: 13000000 INFO @ Thu, 09 Dec 2021 03:32:46: 16000000 INFO @ Thu, 09 Dec 2021 03:32:49: 9000000 INFO @ Thu, 09 Dec 2021 03:32:52: 14000000 INFO @ Thu, 09 Dec 2021 03:32:55: 17000000 INFO @ Thu, 09 Dec 2021 03:32:57: 10000000 INFO @ Thu, 09 Dec 2021 03:33:01: 15000000 INFO @ Thu, 09 Dec 2021 03:33:03: 18000000 INFO @ Thu, 09 Dec 2021 03:33:05: 11000000 INFO @ Thu, 09 Dec 2021 03:33:09: 16000000 INFO @ Thu, 09 Dec 2021 03:33:12: 19000000 INFO @ Thu, 09 Dec 2021 03:33:14: 12000000 INFO @ Thu, 09 Dec 2021 03:33:18: 17000000 INFO @ Thu, 09 Dec 2021 03:33:20: 20000000 INFO @ Thu, 09 Dec 2021 03:33:22: 13000000 INFO @ Thu, 09 Dec 2021 03:33:27: 18000000 INFO @ Thu, 09 Dec 2021 03:33:28: 21000000 INFO @ Thu, 09 Dec 2021 03:33:30: 14000000 INFO @ Thu, 09 Dec 2021 03:33:36: 22000000 INFO @ Thu, 09 Dec 2021 03:33:36: 19000000 INFO @ Thu, 09 Dec 2021 03:33:39: 15000000 INFO @ Thu, 09 Dec 2021 03:33:44: 23000000 INFO @ Thu, 09 Dec 2021 03:33:45: 20000000 INFO @ Thu, 09 Dec 2021 03:33:47: 16000000 INFO @ Thu, 09 Dec 2021 03:33:51: 24000000 INFO @ Thu, 09 Dec 2021 03:33:55: 21000000 INFO @ Thu, 09 Dec 2021 03:33:55: 17000000 INFO @ Thu, 09 Dec 2021 03:33:59: 25000000 INFO @ Thu, 09 Dec 2021 03:34:04: 18000000 INFO @ Thu, 09 Dec 2021 03:34:05: 22000000 INFO @ Thu, 09 Dec 2021 03:34:07: 26000000 INFO @ Thu, 09 Dec 2021 03:34:12: 19000000 INFO @ Thu, 09 Dec 2021 03:34:15: 23000000 INFO @ Thu, 09 Dec 2021 03:34:15: 27000000 INFO @ Thu, 09 Dec 2021 03:34:20: 20000000 INFO @ Thu, 09 Dec 2021 03:34:22: 28000000 INFO @ Thu, 09 Dec 2021 03:34:24: 24000000 INFO @ Thu, 09 Dec 2021 03:34:28: 21000000 INFO @ Thu, 09 Dec 2021 03:34:30: 29000000 INFO @ Thu, 09 Dec 2021 03:34:34: 25000000 INFO @ Thu, 09 Dec 2021 03:34:36: 22000000 INFO @ Thu, 09 Dec 2021 03:34:38: 30000000 INFO @ Thu, 09 Dec 2021 03:34:44: 23000000 INFO @ Thu, 09 Dec 2021 03:34:44: 26000000 INFO @ Thu, 09 Dec 2021 03:34:46: 31000000 INFO @ Thu, 09 Dec 2021 03:34:51: 24000000 INFO @ Thu, 09 Dec 2021 03:34:54: 27000000 INFO @ Thu, 09 Dec 2021 03:34:54: 32000000 INFO @ Thu, 09 Dec 2021 03:34:58: 25000000 INFO @ Thu, 09 Dec 2021 03:35:02: 33000000 INFO @ Thu, 09 Dec 2021 03:35:03: 28000000 INFO @ Thu, 09 Dec 2021 03:35:06: 26000000 INFO @ Thu, 09 Dec 2021 03:35:11: 34000000 INFO @ Thu, 09 Dec 2021 03:35:13: 27000000 INFO @ Thu, 09 Dec 2021 03:35:13: 29000000 INFO @ Thu, 09 Dec 2021 03:35:20: 28000000 INFO @ Thu, 09 Dec 2021 03:35:20: 35000000 INFO @ Thu, 09 Dec 2021 03:35:23: 30000000 INFO @ Thu, 09 Dec 2021 03:35:27: 29000000 INFO @ Thu, 09 Dec 2021 03:35:28: 36000000 INFO @ Thu, 09 Dec 2021 03:35:32: 31000000 INFO @ Thu, 09 Dec 2021 03:35:34: 30000000 INFO @ Thu, 09 Dec 2021 03:35:36: 37000000 INFO @ Thu, 09 Dec 2021 03:35:41: 31000000 INFO @ Thu, 09 Dec 2021 03:35:42: 32000000 INFO @ Thu, 09 Dec 2021 03:35:45: 38000000 INFO @ Thu, 09 Dec 2021 03:35:49: 32000000 INFO @ Thu, 09 Dec 2021 03:35:51: 33000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 09 Dec 2021 03:35:54: 39000000 INFO @ Thu, 09 Dec 2021 03:35:57: 33000000 INFO @ Thu, 09 Dec 2021 03:36:00: 34000000 INFO @ Thu, 09 Dec 2021 03:36:01: 40000000 INFO @ Thu, 09 Dec 2021 03:36:06: 34000000 INFO @ Thu, 09 Dec 2021 03:36:08: 35000000 INFO @ Thu, 09 Dec 2021 03:36:08: 41000000 INFO @ Thu, 09 Dec 2021 03:36:14: 35000000 INFO @ Thu, 09 Dec 2021 03:36:16: 42000000 INFO @ Thu, 09 Dec 2021 03:36:17: 36000000 INFO @ Thu, 09 Dec 2021 03:36:22: 36000000 INFO @ Thu, 09 Dec 2021 03:36:24: 43000000 INFO @ Thu, 09 Dec 2021 03:36:27: 37000000 INFO @ Thu, 09 Dec 2021 03:36:29: 37000000 INFO @ Thu, 09 Dec 2021 03:36:32: 44000000 INFO @ Thu, 09 Dec 2021 03:36:36: 38000000 INFO @ Thu, 09 Dec 2021 03:36:37: 38000000 INFO @ Thu, 09 Dec 2021 03:36:40: 45000000 INFO @ Thu, 09 Dec 2021 03:36:45: 39000000 INFO @ Thu, 09 Dec 2021 03:36:46: 39000000 INFO @ Thu, 09 Dec 2021 03:36:48: 46000000 INFO @ Thu, 09 Dec 2021 03:36:52: 40000000 INFO @ Thu, 09 Dec 2021 03:36:55: 40000000 INFO @ Thu, 09 Dec 2021 03:36:55: 47000000 INFO @ Thu, 09 Dec 2021 03:37:00: 41000000 INFO @ Thu, 09 Dec 2021 03:37:03: 48000000 INFO @ Thu, 09 Dec 2021 03:37:04: 41000000 INFO @ Thu, 09 Dec 2021 03:37:08: 42000000 INFO @ Thu, 09 Dec 2021 03:37:12: 49000000 INFO @ Thu, 09 Dec 2021 03:37:14: 42000000 INFO @ Thu, 09 Dec 2021 03:37:16: 43000000 INFO @ Thu, 09 Dec 2021 03:37:21: 50000000 INFO @ Thu, 09 Dec 2021 03:37:21: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:37:21: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:37:21: #1 total tags in treatment: 23464095 INFO @ Thu, 09 Dec 2021 03:37:21: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:37:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:37:22: #1 tags after filtering in treatment: 20159029 INFO @ Thu, 09 Dec 2021 03:37:22: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:37:22: #1 finished! INFO @ Thu, 09 Dec 2021 03:37:22: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:37:22: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:37:23: #2 number of paired peaks: 335 WARNING @ Thu, 09 Dec 2021 03:37:23: Fewer paired peaks (335) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 335 pairs to build model! INFO @ Thu, 09 Dec 2021 03:37:23: start model_add_line... INFO @ Thu, 09 Dec 2021 03:37:23: 44000000 INFO @ Thu, 09 Dec 2021 03:37:23: start X-correlation... INFO @ Thu, 09 Dec 2021 03:37:23: end of X-cor INFO @ Thu, 09 Dec 2021 03:37:23: #2 finished! INFO @ Thu, 09 Dec 2021 03:37:23: #2 predicted fragment length is 151 bps INFO @ Thu, 09 Dec 2021 03:37:23: #2 alternative fragment length(s) may be 4,151,157 bps INFO @ Thu, 09 Dec 2021 03:37:23: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05_model.r INFO @ Thu, 09 Dec 2021 03:37:23: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:37:23: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:37:24: 43000000 INFO @ Thu, 09 Dec 2021 03:37:31: 45000000 INFO @ Thu, 09 Dec 2021 03:37:33: 44000000 BigWig に変換しました。 INFO @ Thu, 09 Dec 2021 03:37:38: 46000000 INFO @ Thu, 09 Dec 2021 03:37:43: 45000000 INFO @ Thu, 09 Dec 2021 03:37:45: 47000000 INFO @ Thu, 09 Dec 2021 03:37:52: 48000000 INFO @ Thu, 09 Dec 2021 03:37:52: 46000000 INFO @ Thu, 09 Dec 2021 03:38:00: 49000000 INFO @ Thu, 09 Dec 2021 03:38:02: 47000000 INFO @ Thu, 09 Dec 2021 03:38:07: 50000000 INFO @ Thu, 09 Dec 2021 03:38:08: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:38:08: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:38:08: #1 total tags in treatment: 23464095 INFO @ Thu, 09 Dec 2021 03:38:08: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:38:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:38:08: #1 tags after filtering in treatment: 20159029 INFO @ Thu, 09 Dec 2021 03:38:08: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:38:08: #1 finished! INFO @ Thu, 09 Dec 2021 03:38:08: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:38:08: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:38:10: #2 number of paired peaks: 335 WARNING @ Thu, 09 Dec 2021 03:38:10: Fewer paired peaks (335) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 335 pairs to build model! INFO @ Thu, 09 Dec 2021 03:38:10: start model_add_line... INFO @ Thu, 09 Dec 2021 03:38:10: start X-correlation... INFO @ Thu, 09 Dec 2021 03:38:10: end of X-cor INFO @ Thu, 09 Dec 2021 03:38:10: #2 finished! INFO @ Thu, 09 Dec 2021 03:38:10: #2 predicted fragment length is 151 bps INFO @ Thu, 09 Dec 2021 03:38:10: #2 alternative fragment length(s) may be 4,151,157 bps INFO @ Thu, 09 Dec 2021 03:38:10: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20_model.r INFO @ Thu, 09 Dec 2021 03:38:10: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:38:10: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:38:11: 48000000 INFO @ Thu, 09 Dec 2021 03:38:17: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:38:20: 49000000 INFO @ Thu, 09 Dec 2021 03:38:30: 50000000 INFO @ Thu, 09 Dec 2021 03:38:30: #1 tag size is determined as 51 bps INFO @ Thu, 09 Dec 2021 03:38:30: #1 tag size = 51 INFO @ Thu, 09 Dec 2021 03:38:30: #1 total tags in treatment: 23464095 INFO @ Thu, 09 Dec 2021 03:38:30: #1 user defined the maximum tags... INFO @ Thu, 09 Dec 2021 03:38:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 09 Dec 2021 03:38:31: #1 tags after filtering in treatment: 20159029 INFO @ Thu, 09 Dec 2021 03:38:31: #1 Redundant rate of treatment: 0.14 INFO @ Thu, 09 Dec 2021 03:38:31: #1 finished! INFO @ Thu, 09 Dec 2021 03:38:31: #2 Build Peak Model... INFO @ Thu, 09 Dec 2021 03:38:31: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 09 Dec 2021 03:38:33: #2 number of paired peaks: 335 WARNING @ Thu, 09 Dec 2021 03:38:33: Fewer paired peaks (335) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 335 pairs to build model! INFO @ Thu, 09 Dec 2021 03:38:33: start model_add_line... INFO @ Thu, 09 Dec 2021 03:38:33: start X-correlation... INFO @ Thu, 09 Dec 2021 03:38:33: end of X-cor INFO @ Thu, 09 Dec 2021 03:38:33: #2 finished! INFO @ Thu, 09 Dec 2021 03:38:33: #2 predicted fragment length is 151 bps INFO @ Thu, 09 Dec 2021 03:38:33: #2 alternative fragment length(s) may be 4,151,157 bps INFO @ Thu, 09 Dec 2021 03:38:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10_model.r INFO @ Thu, 09 Dec 2021 03:38:33: #3 Call peaks... INFO @ Thu, 09 Dec 2021 03:38:33: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 09 Dec 2021 03:38:42: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05_peaks.xls INFO @ Thu, 09 Dec 2021 03:38:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:38:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.05_summits.bed INFO @ Thu, 09 Dec 2021 03:38:42: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (6433 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 03:39:02: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:39:26: #3 Call peaks for each chromosome... INFO @ Thu, 09 Dec 2021 03:39:26: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20_peaks.xls INFO @ Thu, 09 Dec 2021 03:39:26: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:39:26: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.20_summits.bed INFO @ Thu, 09 Dec 2021 03:39:26: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (1702 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Thu, 09 Dec 2021 03:39:50: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10_peaks.xls INFO @ Thu, 09 Dec 2021 03:39:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10_peaks.narrowPeak INFO @ Thu, 09 Dec 2021 03:39:51: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX8582568/SRX8582568.10_summits.bed INFO @ Thu, 09 Dec 2021 03:39:51: Done! pass1 - making usageList (7 chroms): 3 millis pass2 - checking and writing primary data (3720 records, 4 fields): 12 millis CompletedMACS2peakCalling