Job ID = 12264823 SRX = SRX7687146 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 39746363 spots for SRR11034889/SRR11034889.sra Written 39746363 spots for SRR11034889/SRR11034889.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265638 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:29:48 39746363 reads; of these: 39746363 (100.00%) were paired; of these: 6294477 (15.84%) aligned concordantly 0 times 23542803 (59.23%) aligned concordantly exactly 1 time 9909083 (24.93%) aligned concordantly >1 times ---- 6294477 pairs aligned concordantly 0 times; of these: 4523007 (71.86%) aligned discordantly 1 time ---- 1771470 pairs aligned 0 times concordantly or discordantly; of these: 3542940 mates make up the pairs; of these: 1458274 (41.16%) aligned 0 times 743080 (20.97%) aligned exactly 1 time 1341586 (37.87%) aligned >1 times 98.17% overall alignment rate Time searching: 01:29:48 Overall time: 01:29:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 15156550 / 37912371 = 0.3998 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:47:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:47:46: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:47:46: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:47:54: 1000000 INFO @ Sat, 03 Apr 2021 07:48:01: 2000000 INFO @ Sat, 03 Apr 2021 07:48:08: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:48:15: 4000000 INFO @ Sat, 03 Apr 2021 07:48:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:48:16: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:48:16: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:48:23: 5000000 INFO @ Sat, 03 Apr 2021 07:48:23: 1000000 INFO @ Sat, 03 Apr 2021 07:48:30: 2000000 INFO @ Sat, 03 Apr 2021 07:48:31: 6000000 INFO @ Sat, 03 Apr 2021 07:48:37: 3000000 INFO @ Sat, 03 Apr 2021 07:48:39: 7000000 INFO @ Sat, 03 Apr 2021 07:48:43: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:48:46: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:48:46: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:48:46: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:48:46: 8000000 INFO @ Sat, 03 Apr 2021 07:48:51: 5000000 INFO @ Sat, 03 Apr 2021 07:48:54: 9000000 INFO @ Sat, 03 Apr 2021 07:48:54: 1000000 INFO @ Sat, 03 Apr 2021 07:48:59: 6000000 INFO @ Sat, 03 Apr 2021 07:49:02: 10000000 INFO @ Sat, 03 Apr 2021 07:49:02: 2000000 INFO @ Sat, 03 Apr 2021 07:49:07: 7000000 INFO @ Sat, 03 Apr 2021 07:49:10: 11000000 INFO @ Sat, 03 Apr 2021 07:49:10: 3000000 INFO @ Sat, 03 Apr 2021 07:49:14: 8000000 INFO @ Sat, 03 Apr 2021 07:49:17: 12000000 INFO @ Sat, 03 Apr 2021 07:49:18: 4000000 INFO @ Sat, 03 Apr 2021 07:49:22: 9000000 INFO @ Sat, 03 Apr 2021 07:49:25: 13000000 INFO @ Sat, 03 Apr 2021 07:49:26: 5000000 INFO @ Sat, 03 Apr 2021 07:49:30: 10000000 INFO @ Sat, 03 Apr 2021 07:49:33: 14000000 INFO @ Sat, 03 Apr 2021 07:49:33: 6000000 INFO @ Sat, 03 Apr 2021 07:49:37: 11000000 INFO @ Sat, 03 Apr 2021 07:49:41: 15000000 INFO @ Sat, 03 Apr 2021 07:49:41: 7000000 INFO @ Sat, 03 Apr 2021 07:49:45: 12000000 INFO @ Sat, 03 Apr 2021 07:49:49: 8000000 INFO @ Sat, 03 Apr 2021 07:49:49: 16000000 INFO @ Sat, 03 Apr 2021 07:49:53: 13000000 INFO @ Sat, 03 Apr 2021 07:49:57: 9000000 INFO @ Sat, 03 Apr 2021 07:49:57: 17000000 INFO @ Sat, 03 Apr 2021 07:50:00: 14000000 INFO @ Sat, 03 Apr 2021 07:50:04: 10000000 INFO @ Sat, 03 Apr 2021 07:50:05: 18000000 INFO @ Sat, 03 Apr 2021 07:50:08: 15000000 INFO @ Sat, 03 Apr 2021 07:50:12: 11000000 INFO @ Sat, 03 Apr 2021 07:50:12: 19000000 INFO @ Sat, 03 Apr 2021 07:50:16: 16000000 INFO @ Sat, 03 Apr 2021 07:50:19: 12000000 INFO @ Sat, 03 Apr 2021 07:50:20: 20000000 INFO @ Sat, 03 Apr 2021 07:50:23: 17000000 INFO @ Sat, 03 Apr 2021 07:50:27: 13000000 INFO @ Sat, 03 Apr 2021 07:50:27: 21000000 INFO @ Sat, 03 Apr 2021 07:50:31: 18000000 INFO @ Sat, 03 Apr 2021 07:50:34: 14000000 INFO @ Sat, 03 Apr 2021 07:50:35: 22000000 INFO @ Sat, 03 Apr 2021 07:50:38: 19000000 INFO @ Sat, 03 Apr 2021 07:50:42: 15000000 INFO @ Sat, 03 Apr 2021 07:50:43: 23000000 INFO @ Sat, 03 Apr 2021 07:50:45: 20000000 INFO @ Sat, 03 Apr 2021 07:50:49: 16000000 INFO @ Sat, 03 Apr 2021 07:50:50: 24000000 INFO @ Sat, 03 Apr 2021 07:50:53: 21000000 INFO @ Sat, 03 Apr 2021 07:50:57: 17000000 INFO @ Sat, 03 Apr 2021 07:50:58: 25000000 INFO @ Sat, 03 Apr 2021 07:51:00: 22000000 INFO @ Sat, 03 Apr 2021 07:51:04: 18000000 INFO @ Sat, 03 Apr 2021 07:51:05: 26000000 INFO @ Sat, 03 Apr 2021 07:51:08: 23000000 INFO @ Sat, 03 Apr 2021 07:51:12: 19000000 INFO @ Sat, 03 Apr 2021 07:51:13: 27000000 INFO @ Sat, 03 Apr 2021 07:51:15: 24000000 INFO @ Sat, 03 Apr 2021 07:51:19: 20000000 INFO @ Sat, 03 Apr 2021 07:51:20: 28000000 INFO @ Sat, 03 Apr 2021 07:51:22: 25000000 INFO @ Sat, 03 Apr 2021 07:51:26: 21000000 INFO @ Sat, 03 Apr 2021 07:51:27: 29000000 INFO @ Sat, 03 Apr 2021 07:51:29: 26000000 INFO @ Sat, 03 Apr 2021 07:51:33: 22000000 INFO @ Sat, 03 Apr 2021 07:51:35: 30000000 INFO @ Sat, 03 Apr 2021 07:51:36: 27000000 INFO @ Sat, 03 Apr 2021 07:51:40: 23000000 INFO @ Sat, 03 Apr 2021 07:51:42: 31000000 INFO @ Sat, 03 Apr 2021 07:51:43: 28000000 INFO @ Sat, 03 Apr 2021 07:51:47: 24000000 INFO @ Sat, 03 Apr 2021 07:51:49: 32000000 INFO @ Sat, 03 Apr 2021 07:51:49: 29000000 INFO @ Sat, 03 Apr 2021 07:51:54: 25000000 INFO @ Sat, 03 Apr 2021 07:51:56: 30000000 INFO @ Sat, 03 Apr 2021 07:51:56: 33000000 INFO @ Sat, 03 Apr 2021 07:52:01: 26000000 INFO @ Sat, 03 Apr 2021 07:52:03: 31000000 INFO @ Sat, 03 Apr 2021 07:52:04: 34000000 INFO @ Sat, 03 Apr 2021 07:52:08: 27000000 INFO @ Sat, 03 Apr 2021 07:52:10: 32000000 INFO @ Sat, 03 Apr 2021 07:52:11: 35000000 INFO @ Sat, 03 Apr 2021 07:52:15: 28000000 INFO @ Sat, 03 Apr 2021 07:52:17: 33000000 INFO @ Sat, 03 Apr 2021 07:52:19: 36000000 INFO @ Sat, 03 Apr 2021 07:52:22: 29000000 INFO @ Sat, 03 Apr 2021 07:52:24: 34000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:52:27: 37000000 INFO @ Sat, 03 Apr 2021 07:52:30: 30000000 INFO @ Sat, 03 Apr 2021 07:52:33: 35000000 INFO @ Sat, 03 Apr 2021 07:52:35: 38000000 INFO @ Sat, 03 Apr 2021 07:52:38: 31000000 INFO @ Sat, 03 Apr 2021 07:52:41: 36000000 INFO @ Sat, 03 Apr 2021 07:52:45: 39000000 INFO @ Sat, 03 Apr 2021 07:52:47: 32000000 INFO @ Sat, 03 Apr 2021 07:52:50: 37000000 INFO @ Sat, 03 Apr 2021 07:52:54: 40000000 INFO @ Sat, 03 Apr 2021 07:52:55: 33000000 INFO @ Sat, 03 Apr 2021 07:52:58: 38000000 INFO @ Sat, 03 Apr 2021 07:53:03: 41000000 INFO @ Sat, 03 Apr 2021 07:53:03: 34000000 INFO @ Sat, 03 Apr 2021 07:53:07: 39000000 INFO @ Sat, 03 Apr 2021 07:53:12: 35000000 INFO @ Sat, 03 Apr 2021 07:53:12: 42000000 INFO @ Sat, 03 Apr 2021 07:53:16: 40000000 INFO @ Sat, 03 Apr 2021 07:53:20: 43000000 INFO @ Sat, 03 Apr 2021 07:53:21: 36000000 INFO @ Sat, 03 Apr 2021 07:53:25: 41000000 INFO @ Sat, 03 Apr 2021 07:53:30: 44000000 INFO @ Sat, 03 Apr 2021 07:53:30: 37000000 INFO @ Sat, 03 Apr 2021 07:53:34: 42000000 INFO @ Sat, 03 Apr 2021 07:53:39: 38000000 INFO @ Sat, 03 Apr 2021 07:53:39: 45000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:53:44: 43000000 INFO @ Sat, 03 Apr 2021 07:53:48: 46000000 INFO @ Sat, 03 Apr 2021 07:53:48: 39000000 INFO @ Sat, 03 Apr 2021 07:53:53: 44000000 INFO @ Sat, 03 Apr 2021 07:53:57: 47000000 INFO @ Sat, 03 Apr 2021 07:53:57: 40000000 INFO @ Sat, 03 Apr 2021 07:54:02: 45000000 INFO @ Sat, 03 Apr 2021 07:54:03: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:54:03: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:54:03: #1 total tags in treatment: 19252684 INFO @ Sat, 03 Apr 2021 07:54:03: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:54:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:54:03: #1 tags after filtering in treatment: 13017740 INFO @ Sat, 03 Apr 2021 07:54:03: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:54:03: #1 finished! INFO @ Sat, 03 Apr 2021 07:54:03: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:54:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:54:04: #2 number of paired peaks: 409 WARNING @ Sat, 03 Apr 2021 07:54:04: Fewer paired peaks (409) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 409 pairs to build model! INFO @ Sat, 03 Apr 2021 07:54:04: start model_add_line... INFO @ Sat, 03 Apr 2021 07:54:04: start X-correlation... INFO @ Sat, 03 Apr 2021 07:54:04: end of X-cor INFO @ Sat, 03 Apr 2021 07:54:04: #2 finished! INFO @ Sat, 03 Apr 2021 07:54:04: #2 predicted fragment length is 109 bps INFO @ Sat, 03 Apr 2021 07:54:04: #2 alternative fragment length(s) may be 3,109,120 bps INFO @ Sat, 03 Apr 2021 07:54:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05_model.r WARNING @ Sat, 03 Apr 2021 07:54:04: #2 Since the d (109) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:54:04: #2 You may need to consider one of the other alternative d(s): 3,109,120 WARNING @ Sat, 03 Apr 2021 07:54:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:54:04: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:54:04: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:54:06: 41000000 INFO @ Sat, 03 Apr 2021 07:54:11: 46000000 INFO @ Sat, 03 Apr 2021 07:54:15: 42000000 INFO @ Sat, 03 Apr 2021 07:54:19: 47000000 INFO @ Sat, 03 Apr 2021 07:54:23: 43000000 INFO @ Sat, 03 Apr 2021 07:54:25: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:54:25: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:54:25: #1 total tags in treatment: 19252684 INFO @ Sat, 03 Apr 2021 07:54:25: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:54:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:54:26: #1 tags after filtering in treatment: 13017740 INFO @ Sat, 03 Apr 2021 07:54:26: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:54:26: #1 finished! INFO @ Sat, 03 Apr 2021 07:54:26: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:54:26: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:54:26: #2 number of paired peaks: 409 WARNING @ Sat, 03 Apr 2021 07:54:26: Fewer paired peaks (409) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 409 pairs to build model! INFO @ Sat, 03 Apr 2021 07:54:26: start model_add_line... INFO @ Sat, 03 Apr 2021 07:54:27: start X-correlation... INFO @ Sat, 03 Apr 2021 07:54:27: end of X-cor INFO @ Sat, 03 Apr 2021 07:54:27: #2 finished! INFO @ Sat, 03 Apr 2021 07:54:27: #2 predicted fragment length is 109 bps INFO @ Sat, 03 Apr 2021 07:54:27: #2 alternative fragment length(s) may be 3,109,120 bps INFO @ Sat, 03 Apr 2021 07:54:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10_model.r WARNING @ Sat, 03 Apr 2021 07:54:27: #2 Since the d (109) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:54:27: #2 You may need to consider one of the other alternative d(s): 3,109,120 WARNING @ Sat, 03 Apr 2021 07:54:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:54:27: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:54:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:54:29: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:54:31: 44000000 INFO @ Sat, 03 Apr 2021 07:54:40: 45000000 INFO @ Sat, 03 Apr 2021 07:54:41: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:54:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:54:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.05_summits.bed INFO @ Sat, 03 Apr 2021 07:54:41: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (1077 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:54:48: 46000000 INFO @ Sat, 03 Apr 2021 07:54:51: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:54:56: 47000000 INFO @ Sat, 03 Apr 2021 07:55:01: #1 tag size is determined as 75 bps INFO @ Sat, 03 Apr 2021 07:55:01: #1 tag size = 75 INFO @ Sat, 03 Apr 2021 07:55:01: #1 total tags in treatment: 19252684 INFO @ Sat, 03 Apr 2021 07:55:01: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:55:01: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:55:02: #1 tags after filtering in treatment: 13017740 INFO @ Sat, 03 Apr 2021 07:55:02: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:55:02: #1 finished! INFO @ Sat, 03 Apr 2021 07:55:02: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:55:02: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:55:03: #2 number of paired peaks: 409 WARNING @ Sat, 03 Apr 2021 07:55:03: Fewer paired peaks (409) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 409 pairs to build model! INFO @ Sat, 03 Apr 2021 07:55:03: start model_add_line... INFO @ Sat, 03 Apr 2021 07:55:03: start X-correlation... INFO @ Sat, 03 Apr 2021 07:55:03: end of X-cor INFO @ Sat, 03 Apr 2021 07:55:03: #2 finished! INFO @ Sat, 03 Apr 2021 07:55:03: #2 predicted fragment length is 109 bps INFO @ Sat, 03 Apr 2021 07:55:03: #2 alternative fragment length(s) may be 3,109,120 bps INFO @ Sat, 03 Apr 2021 07:55:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20_model.r WARNING @ Sat, 03 Apr 2021 07:55:03: #2 Since the d (109) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:55:03: #2 You may need to consider one of the other alternative d(s): 3,109,120 WARNING @ Sat, 03 Apr 2021 07:55:03: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:55:03: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:55:03: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:55:03: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:55:03: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:55:03: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.10_summits.bed INFO @ Sat, 03 Apr 2021 07:55:03: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (491 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:55:27: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:55:39: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:55:39: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:55:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX7687146/SRX7687146.20_summits.bed INFO @ Sat, 03 Apr 2021 07:55:40: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (219 records, 4 fields): 2 millis CompletedMACS2peakCalling