Job ID = 5720225 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-15T12:39:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T12:39:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T12:53:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T13:06:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T13:23:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 26,871,463 reads read : 53,742,926 reads written : 53,742,926 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:51 26871463 reads; of these: 26871463 (100.00%) were paired; of these: 9327781 (34.71%) aligned concordantly 0 times 14870512 (55.34%) aligned concordantly exactly 1 time 2673170 (9.95%) aligned concordantly >1 times ---- 9327781 pairs aligned concordantly 0 times; of these: 5505256 (59.02%) aligned discordantly 1 time ---- 3822525 pairs aligned 0 times concordantly or discordantly; of these: 7645050 mates make up the pairs; of these: 5965942 (78.04%) aligned 0 times 605191 (7.92%) aligned exactly 1 time 1073917 (14.05%) aligned >1 times 88.90% overall alignment rate Time searching: 00:48:51 Overall time: 00:48:51 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 2373358 / 22703494 = 0.1045 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 15 Apr 2020 23:36:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 15 Apr 2020 23:36:55: #1 read tag files... INFO @ Wed, 15 Apr 2020 23:36:55: #1 read treatment tags... INFO @ Wed, 15 Apr 2020 23:37:02: 1000000 INFO @ Wed, 15 Apr 2020 23:37:10: 2000000 INFO @ Wed, 15 Apr 2020 23:37:17: 3000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 15 Apr 2020 23:37:25: 4000000 INFO @ Wed, 15 Apr 2020 23:37:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 15 Apr 2020 23:37:25: #1 read tag files... INFO @ Wed, 15 Apr 2020 23:37:25: #1 read treatment tags... INFO @ Wed, 15 Apr 2020 23:37:32: 5000000 INFO @ Wed, 15 Apr 2020 23:37:32: 1000000 INFO @ Wed, 15 Apr 2020 23:37:40: 6000000 INFO @ Wed, 15 Apr 2020 23:37:40: 2000000 INFO @ Wed, 15 Apr 2020 23:37:47: 7000000 INFO @ Wed, 15 Apr 2020 23:37:48: 3000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 15 Apr 2020 23:37:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 15 Apr 2020 23:37:55: #1 read tag files... INFO @ Wed, 15 Apr 2020 23:37:55: #1 read treatment tags... INFO @ Wed, 15 Apr 2020 23:37:55: 4000000 INFO @ Wed, 15 Apr 2020 23:37:55: 8000000 INFO @ Wed, 15 Apr 2020 23:38:01: 1000000 INFO @ Wed, 15 Apr 2020 23:38:03: 5000000 INFO @ Wed, 15 Apr 2020 23:38:03: 9000000 INFO @ Wed, 15 Apr 2020 23:38:08: 2000000 INFO @ Wed, 15 Apr 2020 23:38:10: 6000000 INFO @ Wed, 15 Apr 2020 23:38:10: 10000000 INFO @ Wed, 15 Apr 2020 23:38:14: 3000000 INFO @ Wed, 15 Apr 2020 23:38:18: 7000000 INFO @ Wed, 15 Apr 2020 23:38:18: 11000000 INFO @ Wed, 15 Apr 2020 23:38:21: 4000000 INFO @ Wed, 15 Apr 2020 23:38:26: 8000000 INFO @ Wed, 15 Apr 2020 23:38:26: 12000000 INFO @ Wed, 15 Apr 2020 23:38:27: 5000000 INFO @ Wed, 15 Apr 2020 23:38:33: 9000000 INFO @ Wed, 15 Apr 2020 23:38:34: 6000000 INFO @ Wed, 15 Apr 2020 23:38:34: 13000000 INFO @ Wed, 15 Apr 2020 23:38:40: 7000000 INFO @ Wed, 15 Apr 2020 23:38:41: 10000000 INFO @ Wed, 15 Apr 2020 23:38:42: 14000000 INFO @ Wed, 15 Apr 2020 23:38:47: 8000000 INFO @ Wed, 15 Apr 2020 23:38:49: 11000000 INFO @ Wed, 15 Apr 2020 23:38:50: 15000000 INFO @ Wed, 15 Apr 2020 23:38:54: 9000000 INFO @ Wed, 15 Apr 2020 23:38:57: 12000000 INFO @ Wed, 15 Apr 2020 23:38:58: 16000000 INFO @ Wed, 15 Apr 2020 23:39:00: 10000000 INFO @ Wed, 15 Apr 2020 23:39:05: 13000000 INFO @ Wed, 15 Apr 2020 23:39:06: 17000000 INFO @ Wed, 15 Apr 2020 23:39:07: 11000000 INFO @ Wed, 15 Apr 2020 23:39:12: 14000000 INFO @ Wed, 15 Apr 2020 23:39:13: 18000000 INFO @ Wed, 15 Apr 2020 23:39:13: 12000000 INFO @ Wed, 15 Apr 2020 23:39:20: 13000000 INFO @ Wed, 15 Apr 2020 23:39:20: 15000000 INFO @ Wed, 15 Apr 2020 23:39:21: 19000000 INFO @ Wed, 15 Apr 2020 23:39:26: 14000000 INFO @ Wed, 15 Apr 2020 23:39:28: 16000000 INFO @ Wed, 15 Apr 2020 23:39:28: 20000000 INFO @ Wed, 15 Apr 2020 23:39:33: 15000000 INFO @ Wed, 15 Apr 2020 23:39:35: 17000000 INFO @ Wed, 15 Apr 2020 23:39:36: 21000000 INFO @ Wed, 15 Apr 2020 23:39:39: 16000000 INFO @ Wed, 15 Apr 2020 23:39:43: 18000000 INFO @ Wed, 15 Apr 2020 23:39:44: 22000000 INFO @ Wed, 15 Apr 2020 23:39:46: 17000000 INFO @ Wed, 15 Apr 2020 23:39:50: 19000000 INFO @ Wed, 15 Apr 2020 23:39:51: 23000000 INFO @ Wed, 15 Apr 2020 23:39:52: 18000000 INFO @ Wed, 15 Apr 2020 23:39:58: 20000000 INFO @ Wed, 15 Apr 2020 23:39:59: 19000000 INFO @ Wed, 15 Apr 2020 23:39:59: 24000000 INFO @ Wed, 15 Apr 2020 23:40:05: 20000000 INFO @ Wed, 15 Apr 2020 23:40:05: 21000000 INFO @ Wed, 15 Apr 2020 23:40:07: 25000000 INFO @ Wed, 15 Apr 2020 23:40:12: 21000000 INFO @ Wed, 15 Apr 2020 23:40:13: 22000000 INFO @ Wed, 15 Apr 2020 23:40:14: 26000000 INFO @ Wed, 15 Apr 2020 23:40:18: 22000000 INFO @ Wed, 15 Apr 2020 23:40:20: 23000000 INFO @ Wed, 15 Apr 2020 23:40:22: 27000000 INFO @ Wed, 15 Apr 2020 23:40:25: 23000000 INFO @ Wed, 15 Apr 2020 23:40:28: 24000000 INFO @ Wed, 15 Apr 2020 23:40:30: 28000000 INFO @ Wed, 15 Apr 2020 23:40:31: 24000000 INFO @ Wed, 15 Apr 2020 23:40:35: 25000000 INFO @ Wed, 15 Apr 2020 23:40:37: 29000000 INFO @ Wed, 15 Apr 2020 23:40:38: 25000000 INFO @ Wed, 15 Apr 2020 23:40:43: 26000000 INFO @ Wed, 15 Apr 2020 23:40:44: 26000000 INFO @ Wed, 15 Apr 2020 23:40:45: 30000000 INFO @ Wed, 15 Apr 2020 23:40:51: 27000000 INFO @ Wed, 15 Apr 2020 23:40:51: 27000000 INFO @ Wed, 15 Apr 2020 23:40:52: 31000000 INFO @ Wed, 15 Apr 2020 23:40:58: 28000000 INFO @ Wed, 15 Apr 2020 23:40:59: 28000000 INFO @ Wed, 15 Apr 2020 23:41:00: 32000000 INFO @ Wed, 15 Apr 2020 23:41:06: 29000000 INFO @ Wed, 15 Apr 2020 23:41:07: 29000000 INFO @ Wed, 15 Apr 2020 23:41:08: 33000000 INFO @ Wed, 15 Apr 2020 23:41:14: 30000000 INFO @ Wed, 15 Apr 2020 23:41:14: 30000000 INFO @ Wed, 15 Apr 2020 23:41:16: 34000000 INFO @ Wed, 15 Apr 2020 23:41:22: 31000000 INFO @ Wed, 15 Apr 2020 23:41:22: 31000000 INFO @ Wed, 15 Apr 2020 23:41:24: 35000000 INFO @ Wed, 15 Apr 2020 23:41:30: 32000000 INFO @ Wed, 15 Apr 2020 23:41:31: 32000000 INFO @ Wed, 15 Apr 2020 23:41:32: 36000000 INFO @ Wed, 15 Apr 2020 23:41:38: 33000000 INFO @ Wed, 15 Apr 2020 23:41:39: 33000000 INFO @ Wed, 15 Apr 2020 23:41:40: 37000000 INFO @ Wed, 15 Apr 2020 23:41:46: 34000000 INFO @ Wed, 15 Apr 2020 23:41:47: 34000000 INFO @ Wed, 15 Apr 2020 23:41:48: 38000000 INFO @ Wed, 15 Apr 2020 23:41:54: 35000000 INFO @ Wed, 15 Apr 2020 23:41:55: 35000000 INFO @ Wed, 15 Apr 2020 23:41:56: 39000000 INFO @ Wed, 15 Apr 2020 23:42:02: 36000000 INFO @ Wed, 15 Apr 2020 23:42:03: 36000000 INFO @ Wed, 15 Apr 2020 23:42:04: 40000000 INFO @ Wed, 15 Apr 2020 23:42:10: 37000000 INFO @ Wed, 15 Apr 2020 23:42:11: 37000000 INFO @ Wed, 15 Apr 2020 23:42:12: 41000000 INFO @ Wed, 15 Apr 2020 23:42:18: 38000000 INFO @ Wed, 15 Apr 2020 23:42:19: 38000000 INFO @ Wed, 15 Apr 2020 23:42:20: 42000000 INFO @ Wed, 15 Apr 2020 23:42:27: 39000000 INFO @ Wed, 15 Apr 2020 23:42:27: 39000000 INFO @ Wed, 15 Apr 2020 23:42:27: 43000000 INFO @ Wed, 15 Apr 2020 23:42:27: #1 tag size is determined as 150 bps INFO @ Wed, 15 Apr 2020 23:42:27: #1 tag size = 150 INFO @ Wed, 15 Apr 2020 23:42:27: #1 total tags in treatment: 15628489 INFO @ Wed, 15 Apr 2020 23:42:27: #1 user defined the maximum tags... INFO @ Wed, 15 Apr 2020 23:42:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 15 Apr 2020 23:42:28: #1 tags after filtering in treatment: 13600395 INFO @ Wed, 15 Apr 2020 23:42:28: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 15 Apr 2020 23:42:28: #1 finished! INFO @ Wed, 15 Apr 2020 23:42:28: #2 Build Peak Model... INFO @ Wed, 15 Apr 2020 23:42:28: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 15 Apr 2020 23:42:29: #2 number of paired peaks: 262 WARNING @ Wed, 15 Apr 2020 23:42:29: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Wed, 15 Apr 2020 23:42:29: start model_add_line... INFO @ Wed, 15 Apr 2020 23:42:29: start X-correlation... INFO @ Wed, 15 Apr 2020 23:42:29: end of X-cor INFO @ Wed, 15 Apr 2020 23:42:29: #2 finished! INFO @ Wed, 15 Apr 2020 23:42:29: #2 predicted fragment length is 203 bps INFO @ Wed, 15 Apr 2020 23:42:29: #2 alternative fragment length(s) may be 203 bps INFO @ Wed, 15 Apr 2020 23:42:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05_model.r WARNING @ Wed, 15 Apr 2020 23:42:29: #2 Since the d (203) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 15 Apr 2020 23:42:29: #2 You may need to consider one of the other alternative d(s): 203 WARNING @ Wed, 15 Apr 2020 23:42:29: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 15 Apr 2020 23:42:29: #3 Call peaks... INFO @ Wed, 15 Apr 2020 23:42:29: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 15 Apr 2020 23:42:34: 40000000 INFO @ Wed, 15 Apr 2020 23:42:35: 40000000 INFO @ Wed, 15 Apr 2020 23:42:42: 41000000 INFO @ Wed, 15 Apr 2020 23:42:43: 41000000 INFO @ Wed, 15 Apr 2020 23:42:50: 42000000 INFO @ Wed, 15 Apr 2020 23:42:51: 42000000 INFO @ Wed, 15 Apr 2020 23:42:54: #3 Call peaks for each chromosome... INFO @ Wed, 15 Apr 2020 23:42:58: 43000000 INFO @ Wed, 15 Apr 2020 23:42:58: #1 tag size is determined as 150 bps INFO @ Wed, 15 Apr 2020 23:42:58: #1 tag size = 150 INFO @ Wed, 15 Apr 2020 23:42:58: #1 total tags in treatment: 15628489 INFO @ Wed, 15 Apr 2020 23:42:58: #1 user defined the maximum tags... INFO @ Wed, 15 Apr 2020 23:42:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 15 Apr 2020 23:42:58: 43000000 INFO @ Wed, 15 Apr 2020 23:42:58: #1 tags after filtering in treatment: 13600395 INFO @ Wed, 15 Apr 2020 23:42:58: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 15 Apr 2020 23:42:58: #1 finished! INFO @ Wed, 15 Apr 2020 23:42:58: #2 Build Peak Model... INFO @ Wed, 15 Apr 2020 23:42:58: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 15 Apr 2020 23:42:58: #1 tag size is determined as 150 bps INFO @ Wed, 15 Apr 2020 23:42:58: #1 tag size = 150 INFO @ Wed, 15 Apr 2020 23:42:58: #1 total tags in treatment: 15628489 INFO @ Wed, 15 Apr 2020 23:42:58: #1 user defined the maximum tags... INFO @ Wed, 15 Apr 2020 23:42:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 15 Apr 2020 23:42:59: #1 tags after filtering in treatment: 13600395 INFO @ Wed, 15 Apr 2020 23:42:59: #1 Redundant rate of treatment: 0.13 INFO @ Wed, 15 Apr 2020 23:42:59: #1 finished! INFO @ Wed, 15 Apr 2020 23:42:59: #2 Build Peak Model... INFO @ Wed, 15 Apr 2020 23:42:59: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 15 Apr 2020 23:42:59: #2 number of paired peaks: 262 WARNING @ Wed, 15 Apr 2020 23:42:59: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Wed, 15 Apr 2020 23:42:59: start model_add_line... INFO @ Wed, 15 Apr 2020 23:42:59: start X-correlation... INFO @ Wed, 15 Apr 2020 23:42:59: end of X-cor INFO @ Wed, 15 Apr 2020 23:42:59: #2 finished! INFO @ Wed, 15 Apr 2020 23:42:59: #2 predicted fragment length is 203 bps INFO @ Wed, 15 Apr 2020 23:42:59: #2 alternative fragment length(s) may be 203 bps INFO @ Wed, 15 Apr 2020 23:42:59: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10_model.r WARNING @ Wed, 15 Apr 2020 23:42:59: #2 Since the d (203) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 15 Apr 2020 23:42:59: #2 You may need to consider one of the other alternative d(s): 203 WARNING @ Wed, 15 Apr 2020 23:42:59: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 15 Apr 2020 23:42:59: #3 Call peaks... INFO @ Wed, 15 Apr 2020 23:42:59: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 15 Apr 2020 23:43:00: #2 number of paired peaks: 262 WARNING @ Wed, 15 Apr 2020 23:43:00: Fewer paired peaks (262) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 262 pairs to build model! INFO @ Wed, 15 Apr 2020 23:43:00: start model_add_line... INFO @ Wed, 15 Apr 2020 23:43:00: start X-correlation... INFO @ Wed, 15 Apr 2020 23:43:00: end of X-cor INFO @ Wed, 15 Apr 2020 23:43:00: #2 finished! INFO @ Wed, 15 Apr 2020 23:43:00: #2 predicted fragment length is 203 bps INFO @ Wed, 15 Apr 2020 23:43:00: #2 alternative fragment length(s) may be 203 bps INFO @ Wed, 15 Apr 2020 23:43:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20_model.r WARNING @ Wed, 15 Apr 2020 23:43:00: #2 Since the d (203) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Wed, 15 Apr 2020 23:43:00: #2 You may need to consider one of the other alternative d(s): 203 WARNING @ Wed, 15 Apr 2020 23:43:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Wed, 15 Apr 2020 23:43:00: #3 Call peaks... INFO @ Wed, 15 Apr 2020 23:43:00: #3 Pre-compute pvalue-qvalue table... INFO @ Wed, 15 Apr 2020 23:43:06: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05_peaks.xls INFO @ Wed, 15 Apr 2020 23:43:06: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05_peaks.narrowPeak INFO @ Wed, 15 Apr 2020 23:43:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.05_summits.bed INFO @ Wed, 15 Apr 2020 23:43:06: Done! pass1 - making usageList (7 chroms): 1 millis pass2 - checking and writing primary data (439 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Wed, 15 Apr 2020 23:43:26: #3 Call peaks for each chromosome... INFO @ Wed, 15 Apr 2020 23:43:26: #3 Call peaks for each chromosome... INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20_peaks.xls INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20_peaks.narrowPeak INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.20_summits.bed INFO @ Wed, 15 Apr 2020 23:43:38: Done! INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10_peaks.xls INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10_peaks.narrowPeak INFO @ Wed, 15 Apr 2020 23:43:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX6619597/SRX6619597.10_summits.bed INFO @ Wed, 15 Apr 2020 23:43:38: Done! pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (224 records, 4 fields): 1 millis CompletedMACS2peakCalling pass1 - making usageList (7 chroms): 0 millis pass2 - checking and writing primary data (336 records, 4 fields): 1 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。