Job ID = 3785782 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-11-01T05:30:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:30:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:31:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:33:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:34:43 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:36:54 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:38:29 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:36 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:39:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:40:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:13 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:14 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:41:35 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:42:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:44:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:44:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:45:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:45:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:07 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:11 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:46:39 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:30 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:47:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:48:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:48:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:49:16 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:49:31 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:01 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:02 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:17 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:50:51 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:52:21 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:53:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:54:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:54:51 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:54:51 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:22 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:55:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:56:00 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:56:08 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:10 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:44 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:57:47 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:58:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-11-01T05:59:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 90,606,086 reads read : 181,212,172 reads written : 90,606,086 reads 0-length : 90,606,086 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:22:11 90606086 reads; of these: 90606086 (100.00%) were unpaired; of these: 3387247 (3.74%) aligned 0 times 73824408 (81.48%) aligned exactly 1 time 13394431 (14.78%) aligned >1 times 96.26% overall alignment rate Time searching: 00:22:11 Overall time: 00:22:11 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdupse_core] 32115395 / 87218839 = 0.3682 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Fri, 01 Nov 2019 16:04:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:04:07: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:04:07: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:04:14: 1000000 INFO @ Fri, 01 Nov 2019 16:04:21: 2000000 INFO @ Fri, 01 Nov 2019 16:04:28: 3000000 INFO @ Fri, 01 Nov 2019 16:04:36: 4000000 INFO @ Fri, 01 Nov 2019 16:04:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:04:37: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:04:37: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:04:43: 5000000 INFO @ Fri, 01 Nov 2019 16:04:45: 1000000 INFO @ Fri, 01 Nov 2019 16:04:50: 6000000 INFO @ Fri, 01 Nov 2019 16:04:54: 2000000 INFO @ Fri, 01 Nov 2019 16:04:58: 7000000 INFO @ Fri, 01 Nov 2019 16:05:02: 3000000 BedGraph に変換中... INFO @ Fri, 01 Nov 2019 16:05:05: 8000000 INFO @ Fri, 01 Nov 2019 16:05:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 01 Nov 2019 16:05:07: #1 read tag files... INFO @ Fri, 01 Nov 2019 16:05:07: #1 read treatment tags... INFO @ Fri, 01 Nov 2019 16:05:10: 4000000 INFO @ Fri, 01 Nov 2019 16:05:13: 9000000 INFO @ Fri, 01 Nov 2019 16:05:15: 1000000 INFO @ Fri, 01 Nov 2019 16:05:18: 5000000 INFO @ Fri, 01 Nov 2019 16:05:20: 10000000 INFO @ Fri, 01 Nov 2019 16:05:24: 2000000 INFO @ Fri, 01 Nov 2019 16:05:27: 6000000 INFO @ Fri, 01 Nov 2019 16:05:28: 11000000 INFO @ Fri, 01 Nov 2019 16:05:32: 3000000 INFO @ Fri, 01 Nov 2019 16:05:35: 12000000 INFO @ Fri, 01 Nov 2019 16:05:35: 7000000 INFO @ Fri, 01 Nov 2019 16:05:40: 4000000 INFO @ Fri, 01 Nov 2019 16:05:43: 13000000 INFO @ Fri, 01 Nov 2019 16:05:44: 8000000 INFO @ Fri, 01 Nov 2019 16:05:49: 5000000 INFO @ Fri, 01 Nov 2019 16:05:50: 14000000 INFO @ Fri, 01 Nov 2019 16:05:52: 9000000 INFO @ Fri, 01 Nov 2019 16:05:57: 6000000 INFO @ Fri, 01 Nov 2019 16:05:58: 15000000 INFO @ Fri, 01 Nov 2019 16:06:00: 10000000 INFO @ Fri, 01 Nov 2019 16:06:05: 16000000 INFO @ Fri, 01 Nov 2019 16:06:06: 7000000 INFO @ Fri, 01 Nov 2019 16:06:09: 11000000 INFO @ Fri, 01 Nov 2019 16:06:12: 17000000 INFO @ Fri, 01 Nov 2019 16:06:14: 8000000 INFO @ Fri, 01 Nov 2019 16:06:18: 12000000 INFO @ Fri, 01 Nov 2019 16:06:20: 18000000 INFO @ Fri, 01 Nov 2019 16:06:22: 9000000 INFO @ Fri, 01 Nov 2019 16:06:26: 13000000 INFO @ Fri, 01 Nov 2019 16:06:27: 19000000 INFO @ Fri, 01 Nov 2019 16:06:31: 10000000 INFO @ Fri, 01 Nov 2019 16:06:34: 14000000 INFO @ Fri, 01 Nov 2019 16:06:35: 20000000 INFO @ Fri, 01 Nov 2019 16:06:39: 11000000 INFO @ Fri, 01 Nov 2019 16:06:42: 21000000 INFO @ Fri, 01 Nov 2019 16:06:43: 15000000 INFO @ Fri, 01 Nov 2019 16:06:48: 12000000 INFO @ Fri, 01 Nov 2019 16:06:49: 22000000 INFO @ Fri, 01 Nov 2019 16:06:51: 16000000 INFO @ Fri, 01 Nov 2019 16:06:56: 13000000 INFO @ Fri, 01 Nov 2019 16:06:57: 23000000 INFO @ Fri, 01 Nov 2019 16:06:59: 17000000 INFO @ Fri, 01 Nov 2019 16:07:04: 24000000 INFO @ Fri, 01 Nov 2019 16:07:04: 14000000 INFO @ Fri, 01 Nov 2019 16:07:07: 18000000 INFO @ Fri, 01 Nov 2019 16:07:12: 25000000 INFO @ Fri, 01 Nov 2019 16:07:13: 15000000 INFO @ Fri, 01 Nov 2019 16:07:15: 19000000 INFO @ Fri, 01 Nov 2019 16:07:19: 26000000 INFO @ Fri, 01 Nov 2019 16:07:21: 16000000 INFO @ Fri, 01 Nov 2019 16:07:23: 20000000 INFO @ Fri, 01 Nov 2019 16:07:26: 27000000 INFO @ Fri, 01 Nov 2019 16:07:29: 17000000 INFO @ Fri, 01 Nov 2019 16:07:32: 21000000 INFO @ Fri, 01 Nov 2019 16:07:34: 28000000 INFO @ Fri, 01 Nov 2019 16:07:37: 18000000 INFO @ Fri, 01 Nov 2019 16:07:40: 22000000 INFO @ Fri, 01 Nov 2019 16:07:41: 29000000 INFO @ Fri, 01 Nov 2019 16:07:45: 19000000 INFO @ Fri, 01 Nov 2019 16:07:48: 23000000 INFO @ Fri, 01 Nov 2019 16:07:49: 30000000 INFO @ Fri, 01 Nov 2019 16:07:53: 20000000 INFO @ Fri, 01 Nov 2019 16:07:56: 31000000 INFO @ Fri, 01 Nov 2019 16:07:56: 24000000 INFO @ Fri, 01 Nov 2019 16:08:02: 21000000 INFO @ Fri, 01 Nov 2019 16:08:03: 32000000 INFO @ Fri, 01 Nov 2019 16:08:04: 25000000 INFO @ Fri, 01 Nov 2019 16:08:10: 22000000 INFO @ Fri, 01 Nov 2019 16:08:11: 33000000 INFO @ Fri, 01 Nov 2019 16:08:12: 26000000 INFO @ Fri, 01 Nov 2019 16:08:18: 23000000 INFO @ Fri, 01 Nov 2019 16:08:18: 34000000 INFO @ Fri, 01 Nov 2019 16:08:21: 27000000 INFO @ Fri, 01 Nov 2019 16:08:25: 35000000 INFO @ Fri, 01 Nov 2019 16:08:26: 24000000 INFO @ Fri, 01 Nov 2019 16:08:29: 28000000 INFO @ Fri, 01 Nov 2019 16:08:33: 36000000 INFO @ Fri, 01 Nov 2019 16:08:35: 25000000 INFO @ Fri, 01 Nov 2019 16:08:37: 29000000 INFO @ Fri, 01 Nov 2019 16:08:41: 37000000 INFO @ Fri, 01 Nov 2019 16:08:43: 26000000 INFO @ Fri, 01 Nov 2019 16:08:45: 30000000 INFO @ Fri, 01 Nov 2019 16:08:49: 38000000 INFO @ Fri, 01 Nov 2019 16:08:51: 27000000 INFO @ Fri, 01 Nov 2019 16:08:53: 31000000 INFO @ Fri, 01 Nov 2019 16:08:57: 39000000 INFO @ Fri, 01 Nov 2019 16:09:00: 28000000 INFO @ Fri, 01 Nov 2019 16:09:01: 32000000 INFO @ Fri, 01 Nov 2019 16:09:04: 40000000 INFO @ Fri, 01 Nov 2019 16:09:08: 29000000 INFO @ Fri, 01 Nov 2019 16:09:10: 33000000 INFO @ Fri, 01 Nov 2019 16:09:12: 41000000 INFO @ Fri, 01 Nov 2019 16:09:16: 30000000 INFO @ Fri, 01 Nov 2019 16:09:18: 34000000 INFO @ Fri, 01 Nov 2019 16:09:19: 42000000 INFO @ Fri, 01 Nov 2019 16:09:24: 31000000 INFO @ Fri, 01 Nov 2019 16:09:26: 35000000 INFO @ Fri, 01 Nov 2019 16:09:26: 43000000 INFO @ Fri, 01 Nov 2019 16:09:32: 32000000 INFO @ Fri, 01 Nov 2019 16:09:34: 44000000 INFO @ Fri, 01 Nov 2019 16:09:34: 36000000 INFO @ Fri, 01 Nov 2019 16:09:40: 33000000 INFO @ Fri, 01 Nov 2019 16:09:41: 45000000 INFO @ Fri, 01 Nov 2019 16:09:42: 37000000 INFO @ Fri, 01 Nov 2019 16:09:48: 46000000 INFO @ Fri, 01 Nov 2019 16:09:49: 34000000 INFO @ Fri, 01 Nov 2019 16:09:50: 38000000 INFO @ Fri, 01 Nov 2019 16:09:56: 47000000 INFO @ Fri, 01 Nov 2019 16:09:57: 35000000 INFO @ Fri, 01 Nov 2019 16:09:59: 39000000 INFO @ Fri, 01 Nov 2019 16:10:04: 48000000 INFO @ Fri, 01 Nov 2019 16:10:05: 36000000 INFO @ Fri, 01 Nov 2019 16:10:07: 40000000 INFO @ Fri, 01 Nov 2019 16:10:11: 49000000 INFO @ Fri, 01 Nov 2019 16:10:13: 37000000 INFO @ Fri, 01 Nov 2019 16:10:15: 41000000 INFO @ Fri, 01 Nov 2019 16:10:18: 50000000 INFO @ Fri, 01 Nov 2019 16:10:21: 38000000 INFO @ Fri, 01 Nov 2019 16:10:23: 42000000 INFO @ Fri, 01 Nov 2019 16:10:25: 51000000 INFO @ Fri, 01 Nov 2019 16:10:30: 39000000 INFO @ Fri, 01 Nov 2019 16:10:31: 43000000 INFO @ Fri, 01 Nov 2019 16:10:33: 52000000 INFO @ Fri, 01 Nov 2019 16:10:38: 40000000 INFO @ Fri, 01 Nov 2019 16:10:40: 44000000 INFO @ Fri, 01 Nov 2019 16:10:40: 53000000 INFO @ Fri, 01 Nov 2019 16:10:46: 41000000 INFO @ Fri, 01 Nov 2019 16:10:47: 54000000 INFO @ Fri, 01 Nov 2019 16:10:48: 45000000 INFO @ Fri, 01 Nov 2019 16:10:54: 42000000 INFO @ Fri, 01 Nov 2019 16:10:54: 55000000 INFO @ Fri, 01 Nov 2019 16:10:56: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:10:56: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:10:56: #1 total tags in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:10:56: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:10:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:10:56: 46000000 INFO @ Fri, 01 Nov 2019 16:10:57: #1 tags after filtering in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:10:57: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:10:57: #1 finished! INFO @ Fri, 01 Nov 2019 16:10:57: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:10:57: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:11:01: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:11:01: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:11:01: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 16:11:02: 43000000 INFO @ Fri, 01 Nov 2019 16:11:04: 47000000 INFO @ Fri, 01 Nov 2019 16:11:10: 44000000 INFO @ Fri, 01 Nov 2019 16:11:12: 48000000 INFO @ Fri, 01 Nov 2019 16:11:18: 45000000 INFO @ Fri, 01 Nov 2019 16:11:20: 49000000 INFO @ Fri, 01 Nov 2019 16:11:26: 46000000 INFO @ Fri, 01 Nov 2019 16:11:28: 50000000 INFO @ Fri, 01 Nov 2019 16:11:35: 47000000 INFO @ Fri, 01 Nov 2019 16:11:36: 51000000 INFO @ Fri, 01 Nov 2019 16:11:43: 48000000 INFO @ Fri, 01 Nov 2019 16:11:45: 52000000 INFO @ Fri, 01 Nov 2019 16:11:51: 49000000 INFO @ Fri, 01 Nov 2019 16:11:53: 53000000 INFO @ Fri, 01 Nov 2019 16:11:59: 50000000 INFO @ Fri, 01 Nov 2019 16:12:01: 54000000 INFO @ Fri, 01 Nov 2019 16:12:07: 51000000 INFO @ Fri, 01 Nov 2019 16:12:09: 55000000 INFO @ Fri, 01 Nov 2019 16:12:11: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:12:11: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:12:11: #1 total tags in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:12:11: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:12:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:12:12: #1 tags after filtering in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:12:12: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:12:12: #1 finished! INFO @ Fri, 01 Nov 2019 16:12:12: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:12:12: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:12:14: 52000000 INFO @ Fri, 01 Nov 2019 16:12:16: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:12:16: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:12:16: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 01 Nov 2019 16:12:22: 53000000 INFO @ Fri, 01 Nov 2019 16:12:30: 54000000 INFO @ Fri, 01 Nov 2019 16:12:37: 55000000 INFO @ Fri, 01 Nov 2019 16:12:39: #1 tag size is determined as 51 bps INFO @ Fri, 01 Nov 2019 16:12:39: #1 tag size = 51 INFO @ Fri, 01 Nov 2019 16:12:39: #1 total tags in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:12:39: #1 user defined the maximum tags... INFO @ Fri, 01 Nov 2019 16:12:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 01 Nov 2019 16:12:40: #1 tags after filtering in treatment: 55103444 INFO @ Fri, 01 Nov 2019 16:12:40: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 01 Nov 2019 16:12:40: #1 finished! INFO @ Fri, 01 Nov 2019 16:12:40: #2 Build Peak Model... INFO @ Fri, 01 Nov 2019 16:12:40: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 01 Nov 2019 16:12:44: #2 number of paired peaks: 0 WARNING @ Fri, 01 Nov 2019 16:12:44: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 01 Nov 2019 16:12:44: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX5545244/SRX5545244.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。