Job ID = 1292447 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 16,573,811 reads read : 33,147,622 reads written : 33,147,622 spots read : 13,250,175 reads read : 26,500,350 reads written : 26,500,350 rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:31:10 29823986 reads; of these: 29823986 (100.00%) were paired; of these: 3182602 (10.67%) aligned concordantly 0 times 22568665 (75.67%) aligned concordantly exactly 1 time 4072719 (13.66%) aligned concordantly >1 times ---- 3182602 pairs aligned concordantly 0 times; of these: 1062743 (33.39%) aligned discordantly 1 time ---- 2119859 pairs aligned 0 times concordantly or discordantly; of these: 4239718 mates make up the pairs; of these: 2518068 (59.39%) aligned 0 times 1104702 (26.06%) aligned exactly 1 time 616948 (14.55%) aligned >1 times 95.78% overall alignment rate Time searching: 00:31:10 Overall time: 00:31:10 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1067518 / 27085954 = 0.0394 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 20:04:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 20:04:47: #1 read tag files... INFO @ Sun, 02 Jun 2019 20:04:47: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 20:04:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 20:04:47: #1 read tag files... INFO @ Sun, 02 Jun 2019 20:04:47: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 20:04:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 20:04:47: #1 read tag files... INFO @ Sun, 02 Jun 2019 20:04:47: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 20:04:55: 1000000 INFO @ Sun, 02 Jun 2019 20:04:57: 1000000 INFO @ Sun, 02 Jun 2019 20:04:57: 1000000 INFO @ Sun, 02 Jun 2019 20:05:04: 2000000 INFO @ Sun, 02 Jun 2019 20:05:07: 2000000 INFO @ Sun, 02 Jun 2019 20:05:07: 2000000 INFO @ Sun, 02 Jun 2019 20:05:12: 3000000 INFO @ Sun, 02 Jun 2019 20:05:17: 3000000 INFO @ Sun, 02 Jun 2019 20:05:17: 3000000 INFO @ Sun, 02 Jun 2019 20:05:20: 4000000 INFO @ Sun, 02 Jun 2019 20:05:26: 4000000 INFO @ Sun, 02 Jun 2019 20:05:26: 4000000 INFO @ Sun, 02 Jun 2019 20:05:28: 5000000 INFO @ Sun, 02 Jun 2019 20:05:35: 5000000 INFO @ Sun, 02 Jun 2019 20:05:35: 5000000 INFO @ Sun, 02 Jun 2019 20:05:35: 6000000 INFO @ Sun, 02 Jun 2019 20:05:43: 7000000 INFO @ Sun, 02 Jun 2019 20:05:44: 6000000 INFO @ Sun, 02 Jun 2019 20:05:44: 6000000 INFO @ Sun, 02 Jun 2019 20:05:51: 8000000 INFO @ Sun, 02 Jun 2019 20:05:53: 7000000 INFO @ Sun, 02 Jun 2019 20:05:53: 7000000 INFO @ Sun, 02 Jun 2019 20:05:59: 9000000 INFO @ Sun, 02 Jun 2019 20:06:02: 8000000 INFO @ Sun, 02 Jun 2019 20:06:02: 8000000 INFO @ Sun, 02 Jun 2019 20:06:06: 10000000 INFO @ Sun, 02 Jun 2019 20:06:11: 9000000 INFO @ Sun, 02 Jun 2019 20:06:11: 9000000 INFO @ Sun, 02 Jun 2019 20:06:14: 11000000 INFO @ Sun, 02 Jun 2019 20:06:19: 10000000 INFO @ Sun, 02 Jun 2019 20:06:20: 10000000 INFO @ Sun, 02 Jun 2019 20:06:22: 12000000 INFO @ Sun, 02 Jun 2019 20:06:28: 11000000 INFO @ Sun, 02 Jun 2019 20:06:29: 11000000 INFO @ Sun, 02 Jun 2019 20:06:30: 13000000 INFO @ Sun, 02 Jun 2019 20:06:37: 12000000 INFO @ Sun, 02 Jun 2019 20:06:37: 12000000 INFO @ Sun, 02 Jun 2019 20:06:38: 14000000 INFO @ Sun, 02 Jun 2019 20:06:46: 13000000 INFO @ Sun, 02 Jun 2019 20:06:46: 15000000 INFO @ Sun, 02 Jun 2019 20:06:46: 13000000 INFO @ Sun, 02 Jun 2019 20:06:54: 16000000 INFO @ Sun, 02 Jun 2019 20:06:54: 14000000 INFO @ Sun, 02 Jun 2019 20:06:55: 14000000 INFO @ Sun, 02 Jun 2019 20:07:02: 17000000 INFO @ Sun, 02 Jun 2019 20:07:03: 15000000 INFO @ Sun, 02 Jun 2019 20:07:04: 15000000 INFO @ Sun, 02 Jun 2019 20:07:10: 18000000 INFO @ Sun, 02 Jun 2019 20:07:13: 16000000 INFO @ Sun, 02 Jun 2019 20:07:14: 16000000 INFO @ Sun, 02 Jun 2019 20:07:18: 19000000 INFO @ Sun, 02 Jun 2019 20:07:22: 17000000 INFO @ Sun, 02 Jun 2019 20:07:24: 17000000 INFO @ Sun, 02 Jun 2019 20:07:26: 20000000 INFO @ Sun, 02 Jun 2019 20:07:31: 18000000 INFO @ Sun, 02 Jun 2019 20:07:34: 18000000 INFO @ Sun, 02 Jun 2019 20:07:34: 21000000 INFO @ Sun, 02 Jun 2019 20:07:40: 19000000 INFO @ Sun, 02 Jun 2019 20:07:42: 22000000 INFO @ Sun, 02 Jun 2019 20:07:43: 19000000 INFO @ Sun, 02 Jun 2019 20:07:49: 20000000 INFO @ Sun, 02 Jun 2019 20:07:50: 23000000 INFO @ Sun, 02 Jun 2019 20:07:52: 20000000 INFO @ Sun, 02 Jun 2019 20:07:57: 21000000 INFO @ Sun, 02 Jun 2019 20:07:58: 24000000 INFO @ Sun, 02 Jun 2019 20:08:02: 21000000 INFO @ Sun, 02 Jun 2019 20:08:06: 25000000 INFO @ Sun, 02 Jun 2019 20:08:06: 22000000 INFO @ Sun, 02 Jun 2019 20:08:11: 22000000 INFO @ Sun, 02 Jun 2019 20:08:14: 26000000 INFO @ Sun, 02 Jun 2019 20:08:15: 23000000 INFO @ Sun, 02 Jun 2019 20:08:21: 23000000 INFO @ Sun, 02 Jun 2019 20:08:22: 27000000 INFO @ Sun, 02 Jun 2019 20:08:24: 24000000 INFO @ Sun, 02 Jun 2019 20:08:29: 28000000 INFO @ Sun, 02 Jun 2019 20:08:30: 24000000 INFO @ Sun, 02 Jun 2019 20:08:32: 25000000 INFO @ Sun, 02 Jun 2019 20:08:37: 29000000 INFO @ Sun, 02 Jun 2019 20:08:39: 25000000 INFO @ Sun, 02 Jun 2019 20:08:41: 26000000 INFO @ Sun, 02 Jun 2019 20:08:45: 30000000 INFO @ Sun, 02 Jun 2019 20:08:48: 26000000 INFO @ Sun, 02 Jun 2019 20:08:50: 27000000 INFO @ Sun, 02 Jun 2019 20:08:53: 31000000 INFO @ Sun, 02 Jun 2019 20:08:58: 27000000 INFO @ Sun, 02 Jun 2019 20:08:58: 28000000 INFO @ Sun, 02 Jun 2019 20:09:01: 32000000 INFO @ Sun, 02 Jun 2019 20:09:07: 28000000 INFO @ Sun, 02 Jun 2019 20:09:07: 29000000 INFO @ Sun, 02 Jun 2019 20:09:08: 33000000 INFO @ Sun, 02 Jun 2019 20:09:16: 30000000 INFO @ Sun, 02 Jun 2019 20:09:16: 29000000 INFO @ Sun, 02 Jun 2019 20:09:17: 34000000 INFO @ Sun, 02 Jun 2019 20:09:24: 31000000 INFO @ Sun, 02 Jun 2019 20:09:25: 35000000 INFO @ Sun, 02 Jun 2019 20:09:25: 30000000 INFO @ Sun, 02 Jun 2019 20:09:33: 32000000 INFO @ Sun, 02 Jun 2019 20:09:34: 31000000 INFO @ Sun, 02 Jun 2019 20:09:35: 36000000 INFO @ Sun, 02 Jun 2019 20:09:42: 33000000 INFO @ Sun, 02 Jun 2019 20:09:44: 32000000 INFO @ Sun, 02 Jun 2019 20:09:44: 37000000 INFO @ Sun, 02 Jun 2019 20:09:50: 34000000 INFO @ Sun, 02 Jun 2019 20:09:53: 33000000 INFO @ Sun, 02 Jun 2019 20:09:53: 38000000 INFO @ Sun, 02 Jun 2019 20:09:59: 35000000 INFO @ Sun, 02 Jun 2019 20:10:02: 34000000 INFO @ Sun, 02 Jun 2019 20:10:02: 39000000 INFO @ Sun, 02 Jun 2019 20:10:08: 36000000 INFO @ Sun, 02 Jun 2019 20:10:11: 35000000 INFO @ Sun, 02 Jun 2019 20:10:11: 40000000 INFO @ Sun, 02 Jun 2019 20:10:17: 37000000 INFO @ Sun, 02 Jun 2019 20:10:19: 41000000 INFO @ Sun, 02 Jun 2019 20:10:20: 36000000 INFO @ Sun, 02 Jun 2019 20:10:23: 38000000 INFO @ Sun, 02 Jun 2019 20:10:28: 42000000 INFO @ Sun, 02 Jun 2019 20:10:30: 37000000 INFO @ Sun, 02 Jun 2019 20:10:32: 39000000 INFO @ Sun, 02 Jun 2019 20:10:37: 43000000 INFO @ Sun, 02 Jun 2019 20:10:39: 38000000 INFO @ Sun, 02 Jun 2019 20:10:41: 40000000 INFO @ Sun, 02 Jun 2019 20:10:46: 44000000 INFO @ Sun, 02 Jun 2019 20:10:48: 39000000 INFO @ Sun, 02 Jun 2019 20:10:50: 41000000 INFO @ Sun, 02 Jun 2019 20:10:55: 45000000 INFO @ Sun, 02 Jun 2019 20:10:56: 40000000 INFO @ Sun, 02 Jun 2019 20:10:58: 42000000 INFO @ Sun, 02 Jun 2019 20:11:03: 46000000 INFO @ Sun, 02 Jun 2019 20:11:05: 41000000 INFO @ Sun, 02 Jun 2019 20:11:07: 43000000 INFO @ Sun, 02 Jun 2019 20:11:12: 47000000 INFO @ Sun, 02 Jun 2019 20:11:14: 42000000 INFO @ Sun, 02 Jun 2019 20:11:15: 44000000 INFO @ Sun, 02 Jun 2019 20:11:20: 48000000 INFO @ Sun, 02 Jun 2019 20:11:22: 43000000 INFO @ Sun, 02 Jun 2019 20:11:24: 45000000 INFO @ Sun, 02 Jun 2019 20:11:29: 49000000 INFO @ Sun, 02 Jun 2019 20:11:31: 44000000 INFO @ Sun, 02 Jun 2019 20:11:33: 46000000 INFO @ Sun, 02 Jun 2019 20:11:38: 50000000 INFO @ Sun, 02 Jun 2019 20:11:40: 45000000 INFO @ Sun, 02 Jun 2019 20:11:42: 47000000 INFO @ Sun, 02 Jun 2019 20:11:47: 51000000 INFO @ Sun, 02 Jun 2019 20:11:49: 46000000 INFO @ Sun, 02 Jun 2019 20:11:51: 48000000 INFO @ Sun, 02 Jun 2019 20:11:55: 52000000 INFO @ Sun, 02 Jun 2019 20:11:58: 47000000 INFO @ Sun, 02 Jun 2019 20:11:59: 49000000 INFO @ Sun, 02 Jun 2019 20:12:04: 53000000 INFO @ Sun, 02 Jun 2019 20:12:06: 48000000 INFO @ Sun, 02 Jun 2019 20:12:08: 50000000 INFO @ Sun, 02 Jun 2019 20:12:12: 54000000 INFO @ Sun, 02 Jun 2019 20:12:15: 49000000 INFO @ Sun, 02 Jun 2019 20:12:17: 51000000 INFO @ Sun, 02 Jun 2019 20:12:21: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 20:12:21: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 20:12:21: #1 total tags in treatment: 25579746 INFO @ Sun, 02 Jun 2019 20:12:21: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 20:12:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 20:12:22: #1 tags after filtering in treatment: 19557252 INFO @ Sun, 02 Jun 2019 20:12:22: #1 Redundant rate of treatment: 0.24 INFO @ Sun, 02 Jun 2019 20:12:22: #1 finished! INFO @ Sun, 02 Jun 2019 20:12:22: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 20:12:22: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 20:12:23: #2 number of paired peaks: 110 WARNING @ Sun, 02 Jun 2019 20:12:23: Fewer paired peaks (110) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 110 pairs to build model! INFO @ Sun, 02 Jun 2019 20:12:23: start model_add_line... INFO @ Sun, 02 Jun 2019 20:12:24: start X-correlation... INFO @ Sun, 02 Jun 2019 20:12:24: end of X-cor INFO @ Sun, 02 Jun 2019 20:12:24: #2 finished! INFO @ Sun, 02 Jun 2019 20:12:24: #2 predicted fragment length is 117 bps INFO @ Sun, 02 Jun 2019 20:12:24: #2 alternative fragment length(s) may be 2,64,103,117 bps INFO @ Sun, 02 Jun 2019 20:12:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10_model.r INFO @ Sun, 02 Jun 2019 20:12:24: #3 Call peaks... INFO @ Sun, 02 Jun 2019 20:12:24: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 20:12:24: 50000000 INFO @ Sun, 02 Jun 2019 20:12:26: 52000000 INFO @ Sun, 02 Jun 2019 20:12:32: 51000000 INFO @ Sun, 02 Jun 2019 20:12:34: 53000000 INFO @ Sun, 02 Jun 2019 20:12:41: 52000000 INFO @ Sun, 02 Jun 2019 20:12:43: 54000000 INFO @ Sun, 02 Jun 2019 20:12:50: 53000000 INFO @ Sun, 02 Jun 2019 20:12:52: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 20:12:52: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 20:12:52: #1 total tags in treatment: 25579746 INFO @ Sun, 02 Jun 2019 20:12:52: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 20:12:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 20:12:53: #1 tags after filtering in treatment: 19557252 INFO @ Sun, 02 Jun 2019 20:12:53: #1 Redundant rate of treatment: 0.24 INFO @ Sun, 02 Jun 2019 20:12:53: #1 finished! INFO @ Sun, 02 Jun 2019 20:12:53: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 20:12:53: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 20:12:54: #2 number of paired peaks: 110 WARNING @ Sun, 02 Jun 2019 20:12:54: Fewer paired peaks (110) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 110 pairs to build model! INFO @ Sun, 02 Jun 2019 20:12:54: start model_add_line... INFO @ Sun, 02 Jun 2019 20:12:54: start X-correlation... INFO @ Sun, 02 Jun 2019 20:12:54: end of X-cor INFO @ Sun, 02 Jun 2019 20:12:54: #2 finished! INFO @ Sun, 02 Jun 2019 20:12:54: #2 predicted fragment length is 117 bps INFO @ Sun, 02 Jun 2019 20:12:54: #2 alternative fragment length(s) may be 2,64,103,117 bps INFO @ Sun, 02 Jun 2019 20:12:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05_model.r INFO @ Sun, 02 Jun 2019 20:12:54: #3 Call peaks... INFO @ Sun, 02 Jun 2019 20:12:54: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 20:12:58: 54000000 INFO @ Sun, 02 Jun 2019 20:13:07: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 20:13:07: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 20:13:07: #1 total tags in treatment: 25579746 INFO @ Sun, 02 Jun 2019 20:13:07: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 20:13:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 20:13:07: #1 tags after filtering in treatment: 19557252 INFO @ Sun, 02 Jun 2019 20:13:07: #1 Redundant rate of treatment: 0.24 INFO @ Sun, 02 Jun 2019 20:13:07: #1 finished! INFO @ Sun, 02 Jun 2019 20:13:07: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 20:13:07: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 20:13:09: #2 number of paired peaks: 110 WARNING @ Sun, 02 Jun 2019 20:13:09: Fewer paired peaks (110) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 110 pairs to build model! INFO @ Sun, 02 Jun 2019 20:13:09: start model_add_line... INFO @ Sun, 02 Jun 2019 20:13:09: start X-correlation... INFO @ Sun, 02 Jun 2019 20:13:09: end of X-cor INFO @ Sun, 02 Jun 2019 20:13:09: #2 finished! INFO @ Sun, 02 Jun 2019 20:13:09: #2 predicted fragment length is 117 bps INFO @ Sun, 02 Jun 2019 20:13:09: #2 alternative fragment length(s) may be 2,64,103,117 bps INFO @ Sun, 02 Jun 2019 20:13:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20_model.r INFO @ Sun, 02 Jun 2019 20:13:09: #3 Call peaks... INFO @ Sun, 02 Jun 2019 20:13:09: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 20:13:11: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 20:13:34: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10_peaks.xls INFO @ Sun, 02 Jun 2019 20:13:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 20:13:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.10_summits.bed INFO @ Sun, 02 Jun 2019 20:13:34: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (206 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 20:13:42: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 20:13:57: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 20:14:04: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05_peaks.xls INFO @ Sun, 02 Jun 2019 20:14:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 20:14:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.05_summits.bed INFO @ Sun, 02 Jun 2019 20:14:04: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (400 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 20:14:19: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20_peaks.xls INFO @ Sun, 02 Jun 2019 20:14:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 20:14:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX4419827/SRX4419827.20_summits.bed INFO @ Sun, 02 Jun 2019 20:14:19: Done! pass1 - making usageList (6 chroms): 0 millis pass2 - checking and writing primary data (124 records, 4 fields): 2 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。