Job ID = 10714436 sra ファイルのダウンロード中... Completed: 5073706K bytes transferred in 62 seconds (662738K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 72753924 spots for /home/okishinya/chipatlas/results/ce10/SRX4085352/SRR7167381.sra Written 72753924 spots for /home/okishinya/chipatlas/results/ce10/SRX4085352/SRR7167381.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:17:40 72753924 reads; of these: 72753924 (100.00%) were paired; of these: 11997023 (16.49%) aligned concordantly 0 times 52783077 (72.55%) aligned concordantly exactly 1 time 7973824 (10.96%) aligned concordantly >1 times ---- 11997023 pairs aligned concordantly 0 times; of these: 3792110 (31.61%) aligned discordantly 1 time ---- 8204913 pairs aligned 0 times concordantly or discordantly; of these: 16409826 mates make up the pairs; of these: 8987989 (54.77%) aligned 0 times 5227172 (31.85%) aligned exactly 1 time 2194665 (13.37%) aligned >1 times 93.82% overall alignment rate Time searching: 01:17:40 Overall time: 01:17:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 56 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 15761310 / 61416679 = 0.2566 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 03 Jun 2018 14:39:36: # Command line: callpeak -t SRX4085352.bam -f BAM -g ce -n SRX4085352.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4085352.05 # format = BAM # ChIP-seq file = ['SRX4085352.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:39:36: # Command line: callpeak -t SRX4085352.bam -f BAM -g ce -n SRX4085352.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4085352.20 # format = BAM # ChIP-seq file = ['SRX4085352.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:39:36: # Command line: callpeak -t SRX4085352.bam -f BAM -g ce -n SRX4085352.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4085352.10 # format = BAM # ChIP-seq file = ['SRX4085352.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 03 Jun 2018 14:39:36: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:39:36: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:39:36: #1 read tag files... INFO @ Sun, 03 Jun 2018 14:39:36: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:39:36: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:39:36: #1 read treatment tags... INFO @ Sun, 03 Jun 2018 14:39:42: 1000000 INFO @ Sun, 03 Jun 2018 14:39:42: 1000000 INFO @ Sun, 03 Jun 2018 14:39:42: 1000000 INFO @ Sun, 03 Jun 2018 14:39:48: 2000000 INFO @ Sun, 03 Jun 2018 14:39:48: 2000000 INFO @ Sun, 03 Jun 2018 14:39:48: 2000000 INFO @ Sun, 03 Jun 2018 14:39:54: 3000000 INFO @ Sun, 03 Jun 2018 14:39:54: 3000000 INFO @ Sun, 03 Jun 2018 14:39:54: 3000000 INFO @ Sun, 03 Jun 2018 14:39:59: 4000000 INFO @ Sun, 03 Jun 2018 14:40:00: 4000000 INFO @ Sun, 03 Jun 2018 14:40:00: 4000000 INFO @ Sun, 03 Jun 2018 14:40:05: 5000000 INFO @ Sun, 03 Jun 2018 14:40:07: 5000000 INFO @ Sun, 03 Jun 2018 14:40:07: 5000000 INFO @ Sun, 03 Jun 2018 14:40:11: 6000000 INFO @ Sun, 03 Jun 2018 14:40:14: 6000000 INFO @ Sun, 03 Jun 2018 14:40:14: 6000000 INFO @ Sun, 03 Jun 2018 14:40:17: 7000000 INFO @ Sun, 03 Jun 2018 14:40:21: 7000000 INFO @ Sun, 03 Jun 2018 14:40:21: 7000000 INFO @ Sun, 03 Jun 2018 14:40:23: 8000000 INFO @ Sun, 03 Jun 2018 14:40:28: 8000000 INFO @ Sun, 03 Jun 2018 14:40:28: 8000000 INFO @ Sun, 03 Jun 2018 14:40:29: 9000000 INFO @ Sun, 03 Jun 2018 14:40:35: 10000000 INFO @ Sun, 03 Jun 2018 14:40:35: 9000000 INFO @ Sun, 03 Jun 2018 14:40:35: 9000000 INFO @ Sun, 03 Jun 2018 14:40:41: 11000000 INFO @ Sun, 03 Jun 2018 14:40:42: 10000000 INFO @ Sun, 03 Jun 2018 14:40:42: 10000000 INFO @ Sun, 03 Jun 2018 14:40:47: 12000000 INFO @ Sun, 03 Jun 2018 14:40:48: 11000000 INFO @ Sun, 03 Jun 2018 14:40:49: 11000000 INFO @ Sun, 03 Jun 2018 14:40:53: 13000000 INFO @ Sun, 03 Jun 2018 14:40:55: 12000000 INFO @ Sun, 03 Jun 2018 14:40:56: 12000000 INFO @ Sun, 03 Jun 2018 14:41:00: 14000000 INFO @ Sun, 03 Jun 2018 14:41:02: 13000000 INFO @ Sun, 03 Jun 2018 14:41:03: 13000000 INFO @ Sun, 03 Jun 2018 14:41:06: 15000000 INFO @ Sun, 03 Jun 2018 14:41:09: 14000000 INFO @ Sun, 03 Jun 2018 14:41:10: 14000000 INFO @ Sun, 03 Jun 2018 14:41:12: 16000000 INFO @ Sun, 03 Jun 2018 14:41:16: 15000000 INFO @ Sun, 03 Jun 2018 14:41:16: 15000000 INFO @ Sun, 03 Jun 2018 14:41:18: 17000000 INFO @ Sun, 03 Jun 2018 14:41:23: 16000000 INFO @ Sun, 03 Jun 2018 14:41:23: 16000000 INFO @ Sun, 03 Jun 2018 14:41:24: 18000000 INFO @ Sun, 03 Jun 2018 14:41:29: 17000000 INFO @ Sun, 03 Jun 2018 14:41:30: 17000000 INFO @ Sun, 03 Jun 2018 14:41:31: 19000000 INFO @ Sun, 03 Jun 2018 14:41:36: 18000000 INFO @ Sun, 03 Jun 2018 14:41:37: 18000000 INFO @ Sun, 03 Jun 2018 14:41:37: 20000000 INFO @ Sun, 03 Jun 2018 14:41:43: 19000000 INFO @ Sun, 03 Jun 2018 14:41:43: 21000000 INFO @ Sun, 03 Jun 2018 14:41:44: 19000000 INFO @ Sun, 03 Jun 2018 14:41:50: 22000000 INFO @ Sun, 03 Jun 2018 14:41:50: 20000000 INFO @ Sun, 03 Jun 2018 14:41:50: 20000000 INFO @ Sun, 03 Jun 2018 14:41:56: 23000000 INFO @ Sun, 03 Jun 2018 14:41:57: 21000000 INFO @ Sun, 03 Jun 2018 14:41:57: 21000000 INFO @ Sun, 03 Jun 2018 14:42:02: 24000000 INFO @ Sun, 03 Jun 2018 14:42:04: 22000000 INFO @ Sun, 03 Jun 2018 14:42:04: 22000000 INFO @ Sun, 03 Jun 2018 14:42:09: 25000000 INFO @ Sun, 03 Jun 2018 14:42:10: 23000000 INFO @ Sun, 03 Jun 2018 14:42:11: 23000000 INFO @ Sun, 03 Jun 2018 14:42:15: 26000000 INFO @ Sun, 03 Jun 2018 14:42:17: 24000000 INFO @ Sun, 03 Jun 2018 14:42:18: 24000000 INFO @ Sun, 03 Jun 2018 14:42:21: 27000000 INFO @ Sun, 03 Jun 2018 14:42:24: 25000000 INFO @ Sun, 03 Jun 2018 14:42:24: 25000000 INFO @ Sun, 03 Jun 2018 14:42:27: 28000000 INFO @ Sun, 03 Jun 2018 14:42:31: 26000000 INFO @ Sun, 03 Jun 2018 14:42:31: 26000000 INFO @ Sun, 03 Jun 2018 14:42:34: 29000000 INFO @ Sun, 03 Jun 2018 14:42:38: 27000000 INFO @ Sun, 03 Jun 2018 14:42:38: 27000000 INFO @ Sun, 03 Jun 2018 14:42:40: 30000000 INFO @ Sun, 03 Jun 2018 14:42:44: 28000000 INFO @ Sun, 03 Jun 2018 14:42:45: 28000000 INFO @ Sun, 03 Jun 2018 14:42:46: 31000000 INFO @ Sun, 03 Jun 2018 14:42:51: 29000000 INFO @ Sun, 03 Jun 2018 14:42:52: 29000000 INFO @ Sun, 03 Jun 2018 14:42:53: 32000000 INFO @ Sun, 03 Jun 2018 14:42:58: 30000000 INFO @ Sun, 03 Jun 2018 14:42:58: 30000000 INFO @ Sun, 03 Jun 2018 14:42:59: 33000000 INFO @ Sun, 03 Jun 2018 14:43:05: 31000000 INFO @ Sun, 03 Jun 2018 14:43:05: 31000000 INFO @ Sun, 03 Jun 2018 14:43:05: 34000000 INFO @ Sun, 03 Jun 2018 14:43:12: 32000000 INFO @ Sun, 03 Jun 2018 14:43:12: 35000000 INFO @ Sun, 03 Jun 2018 14:43:12: 32000000 INFO @ Sun, 03 Jun 2018 14:43:18: 36000000 INFO @ Sun, 03 Jun 2018 14:43:18: 33000000 INFO @ Sun, 03 Jun 2018 14:43:19: 33000000 INFO @ Sun, 03 Jun 2018 14:43:24: 37000000 INFO @ Sun, 03 Jun 2018 14:43:25: 34000000 INFO @ Sun, 03 Jun 2018 14:43:26: 34000000 INFO @ Sun, 03 Jun 2018 14:43:31: 38000000 INFO @ Sun, 03 Jun 2018 14:43:32: 35000000 INFO @ Sun, 03 Jun 2018 14:43:33: 35000000 INFO @ Sun, 03 Jun 2018 14:43:37: 39000000 INFO @ Sun, 03 Jun 2018 14:43:39: 36000000 INFO @ Sun, 03 Jun 2018 14:43:39: 36000000 INFO @ Sun, 03 Jun 2018 14:43:43: 40000000 INFO @ Sun, 03 Jun 2018 14:43:46: 37000000 INFO @ Sun, 03 Jun 2018 14:43:46: 37000000 INFO @ Sun, 03 Jun 2018 14:43:49: 41000000 INFO @ Sun, 03 Jun 2018 14:43:53: 38000000 INFO @ Sun, 03 Jun 2018 14:43:53: 38000000 INFO @ Sun, 03 Jun 2018 14:43:56: 42000000 INFO @ Sun, 03 Jun 2018 14:43:59: 39000000 INFO @ Sun, 03 Jun 2018 14:44:00: 39000000 INFO @ Sun, 03 Jun 2018 14:44:02: 43000000 INFO @ Sun, 03 Jun 2018 14:44:06: 40000000 INFO @ Sun, 03 Jun 2018 14:44:06: 40000000 INFO @ Sun, 03 Jun 2018 14:44:08: 44000000 INFO @ Sun, 03 Jun 2018 14:44:13: 41000000 INFO @ Sun, 03 Jun 2018 14:44:13: 41000000 INFO @ Sun, 03 Jun 2018 14:44:15: 45000000 INFO @ Sun, 03 Jun 2018 14:44:20: 42000000 INFO @ Sun, 03 Jun 2018 14:44:21: 42000000 INFO @ Sun, 03 Jun 2018 14:44:22: 46000000 INFO @ Sun, 03 Jun 2018 14:44:28: 43000000 INFO @ Sun, 03 Jun 2018 14:44:29: 47000000 INFO @ Sun, 03 Jun 2018 14:44:29: 43000000 INFO @ Sun, 03 Jun 2018 14:44:36: 44000000 INFO @ Sun, 03 Jun 2018 14:44:36: 48000000 INFO @ Sun, 03 Jun 2018 14:44:37: 44000000 INFO @ Sun, 03 Jun 2018 14:44:43: 49000000 INFO @ Sun, 03 Jun 2018 14:44:43: 45000000 INFO @ Sun, 03 Jun 2018 14:44:45: 45000000 INFO @ Sun, 03 Jun 2018 14:44:50: 50000000 INFO @ Sun, 03 Jun 2018 14:44:50: 46000000 INFO @ Sun, 03 Jun 2018 14:44:54: 46000000 INFO @ Sun, 03 Jun 2018 14:44:57: 51000000 INFO @ Sun, 03 Jun 2018 14:44:58: 47000000 INFO @ Sun, 03 Jun 2018 14:45:02: 47000000 INFO @ Sun, 03 Jun 2018 14:45:04: 52000000 INFO @ Sun, 03 Jun 2018 14:45:06: 48000000 INFO @ Sun, 03 Jun 2018 14:45:10: 48000000 INFO @ Sun, 03 Jun 2018 14:45:11: 53000000 INFO @ Sun, 03 Jun 2018 14:45:13: 49000000 INFO @ Sun, 03 Jun 2018 14:45:18: 49000000 INFO @ Sun, 03 Jun 2018 14:45:18: 54000000 INFO @ Sun, 03 Jun 2018 14:45:21: 50000000 INFO @ Sun, 03 Jun 2018 14:45:25: 55000000 INFO @ Sun, 03 Jun 2018 14:45:26: 50000000 INFO @ Sun, 03 Jun 2018 14:45:28: 51000000 INFO @ Sun, 03 Jun 2018 14:45:32: 56000000 INFO @ Sun, 03 Jun 2018 14:45:34: 51000000 INFO @ Sun, 03 Jun 2018 14:45:36: 52000000 INFO @ Sun, 03 Jun 2018 14:45:39: 57000000 INFO @ Sun, 03 Jun 2018 14:45:42: 52000000 INFO @ Sun, 03 Jun 2018 14:45:43: 53000000 INFO @ Sun, 03 Jun 2018 14:45:46: 58000000 INFO @ Sun, 03 Jun 2018 14:45:50: 53000000 INFO @ Sun, 03 Jun 2018 14:45:51: 54000000 INFO @ Sun, 03 Jun 2018 14:45:53: 59000000 INFO @ Sun, 03 Jun 2018 14:45:58: 55000000 INFO @ Sun, 03 Jun 2018 14:45:58: 54000000 INFO @ Sun, 03 Jun 2018 14:46:00: 60000000 INFO @ Sun, 03 Jun 2018 14:46:05: 56000000 INFO @ Sun, 03 Jun 2018 14:46:06: 55000000 INFO @ Sun, 03 Jun 2018 14:46:07: 61000000 INFO @ Sun, 03 Jun 2018 14:46:12: 57000000 INFO @ Sun, 03 Jun 2018 14:46:13: 56000000 INFO @ Sun, 03 Jun 2018 14:46:13: 62000000 INFO @ Sun, 03 Jun 2018 14:46:19: 58000000 INFO @ Sun, 03 Jun 2018 14:46:20: 63000000 INFO @ Sun, 03 Jun 2018 14:46:20: 57000000 INFO @ Sun, 03 Jun 2018 14:46:26: 59000000 INFO @ Sun, 03 Jun 2018 14:46:26: 64000000 INFO @ Sun, 03 Jun 2018 14:46:27: 58000000 INFO @ Sun, 03 Jun 2018 14:46:33: 60000000 INFO @ Sun, 03 Jun 2018 14:46:33: 65000000 INFO @ Sun, 03 Jun 2018 14:46:35: 59000000 INFO @ Sun, 03 Jun 2018 14:46:40: 66000000 INFO @ Sun, 03 Jun 2018 14:46:40: 61000000 INFO @ Sun, 03 Jun 2018 14:46:42: 60000000 INFO @ Sun, 03 Jun 2018 14:46:46: 67000000 INFO @ Sun, 03 Jun 2018 14:46:47: 62000000 INFO @ Sun, 03 Jun 2018 14:46:48: 61000000 INFO @ Sun, 03 Jun 2018 14:46:52: 68000000 INFO @ Sun, 03 Jun 2018 14:46:53: 63000000 INFO @ Sun, 03 Jun 2018 14:46:54: 62000000 INFO @ Sun, 03 Jun 2018 14:46:58: 69000000 INFO @ Sun, 03 Jun 2018 14:46:59: 64000000 INFO @ Sun, 03 Jun 2018 14:47:00: 63000000 INFO @ Sun, 03 Jun 2018 14:47:04: 70000000 INFO @ Sun, 03 Jun 2018 14:47:04: 65000000 INFO @ Sun, 03 Jun 2018 14:47:06: 64000000 INFO @ Sun, 03 Jun 2018 14:47:10: 71000000 INFO @ Sun, 03 Jun 2018 14:47:10: 66000000 INFO @ Sun, 03 Jun 2018 14:47:12: 65000000 INFO @ Sun, 03 Jun 2018 14:47:15: 67000000 INFO @ Sun, 03 Jun 2018 14:47:16: 72000000 INFO @ Sun, 03 Jun 2018 14:47:19: 66000000 INFO @ Sun, 03 Jun 2018 14:47:21: 68000000 INFO @ Sun, 03 Jun 2018 14:47:22: 73000000 INFO @ Sun, 03 Jun 2018 14:47:25: 67000000 INFO @ Sun, 03 Jun 2018 14:47:27: 69000000 INFO @ Sun, 03 Jun 2018 14:47:28: 74000000 INFO @ Sun, 03 Jun 2018 14:47:31: 68000000 INFO @ Sun, 03 Jun 2018 14:47:32: 70000000 INFO @ Sun, 03 Jun 2018 14:47:34: 75000000 INFO @ Sun, 03 Jun 2018 14:47:37: 69000000 INFO @ Sun, 03 Jun 2018 14:47:38: 71000000 INFO @ Sun, 03 Jun 2018 14:47:40: 76000000 INFO @ Sun, 03 Jun 2018 14:47:43: 70000000 INFO @ Sun, 03 Jun 2018 14:47:43: 72000000 INFO @ Sun, 03 Jun 2018 14:47:45: 77000000 INFO @ Sun, 03 Jun 2018 14:47:49: 71000000 INFO @ Sun, 03 Jun 2018 14:47:49: 73000000 INFO @ Sun, 03 Jun 2018 14:47:51: 78000000 INFO @ Sun, 03 Jun 2018 14:47:54: 74000000 INFO @ Sun, 03 Jun 2018 14:47:55: 72000000 INFO @ Sun, 03 Jun 2018 14:47:57: 79000000 INFO @ Sun, 03 Jun 2018 14:48:00: 75000000 INFO @ Sun, 03 Jun 2018 14:48:01: 73000000 INFO @ Sun, 03 Jun 2018 14:48:03: 80000000 INFO @ Sun, 03 Jun 2018 14:48:06: 76000000 INFO @ Sun, 03 Jun 2018 14:48:07: 74000000 INFO @ Sun, 03 Jun 2018 14:48:09: 81000000 INFO @ Sun, 03 Jun 2018 14:48:11: 77000000 INFO @ Sun, 03 Jun 2018 14:48:13: 75000000 INFO @ Sun, 03 Jun 2018 14:48:15: 82000000 INFO @ Sun, 03 Jun 2018 14:48:17: 78000000 INFO @ Sun, 03 Jun 2018 14:48:19: 76000000 INFO @ Sun, 03 Jun 2018 14:48:21: 83000000 INFO @ Sun, 03 Jun 2018 14:48:22: 79000000 INFO @ Sun, 03 Jun 2018 14:48:25: 77000000 INFO @ Sun, 03 Jun 2018 14:48:27: 84000000 INFO @ Sun, 03 Jun 2018 14:48:28: 80000000 INFO @ Sun, 03 Jun 2018 14:48:31: 78000000 INFO @ Sun, 03 Jun 2018 14:48:33: 85000000 INFO @ Sun, 03 Jun 2018 14:48:33: 81000000 INFO @ Sun, 03 Jun 2018 14:48:36: 79000000 INFO @ Sun, 03 Jun 2018 14:48:39: 86000000 INFO @ Sun, 03 Jun 2018 14:48:39: 82000000 INFO @ Sun, 03 Jun 2018 14:48:42: 80000000 INFO @ Sun, 03 Jun 2018 14:48:44: 83000000 INFO @ Sun, 03 Jun 2018 14:48:44: 87000000 INFO @ Sun, 03 Jun 2018 14:48:48: 81000000 INFO @ Sun, 03 Jun 2018 14:48:50: 84000000 INFO @ Sun, 03 Jun 2018 14:48:50: 88000000 INFO @ Sun, 03 Jun 2018 14:48:54: 82000000 INFO @ Sun, 03 Jun 2018 14:48:55: 85000000 INFO @ Sun, 03 Jun 2018 14:48:56: 89000000 INFO @ Sun, 03 Jun 2018 14:49:00: 83000000 INFO @ Sun, 03 Jun 2018 14:49:01: 86000000 INFO @ Sun, 03 Jun 2018 14:49:02: 90000000 INFO @ Sun, 03 Jun 2018 14:49:05: 84000000 INFO @ Sun, 03 Jun 2018 14:49:07: 87000000 INFO @ Sun, 03 Jun 2018 14:49:08: 91000000 INFO @ Sun, 03 Jun 2018 14:49:11: 85000000 INFO @ Sun, 03 Jun 2018 14:49:12: 88000000 INFO @ Sun, 03 Jun 2018 14:49:13: 92000000 INFO @ Sun, 03 Jun 2018 14:49:17: 86000000 INFO @ Sun, 03 Jun 2018 14:49:17: 89000000 INFO @ Sun, 03 Jun 2018 14:49:19: 93000000 INFO @ Sun, 03 Jun 2018 14:49:22: 87000000 INFO @ Sun, 03 Jun 2018 14:49:23: 90000000 INFO @ Sun, 03 Jun 2018 14:49:25: 94000000 INFO @ Sun, 03 Jun 2018 14:49:28: 88000000 INFO @ Sun, 03 Jun 2018 14:49:28: 91000000 INFO @ Sun, 03 Jun 2018 14:49:30: 95000000 INFO @ Sun, 03 Jun 2018 14:49:33: 89000000 INFO @ Sun, 03 Jun 2018 14:49:34: 92000000 INFO @ Sun, 03 Jun 2018 14:49:36: 96000000 INFO @ Sun, 03 Jun 2018 14:49:39: 90000000 INFO @ Sun, 03 Jun 2018 14:49:39: 93000000 INFO @ Sun, 03 Jun 2018 14:49:41: 97000000 INFO @ Sun, 03 Jun 2018 14:49:44: 91000000 INFO @ Sun, 03 Jun 2018 14:49:45: 94000000 INFO @ Sun, 03 Jun 2018 14:49:47: 98000000 INFO @ Sun, 03 Jun 2018 14:49:50: 95000000 INFO @ Sun, 03 Jun 2018 14:49:50: 92000000 INFO @ Sun, 03 Jun 2018 14:49:53: 99000000 INFO @ Sun, 03 Jun 2018 14:49:55: 96000000 INFO @ Sun, 03 Jun 2018 14:49:56: 93000000 INFO @ Sun, 03 Jun 2018 14:49:58: 100000000 INFO @ Sun, 03 Jun 2018 14:50:01: 97000000 INFO @ Sun, 03 Jun 2018 14:50:01: 94000000 INFO @ Sun, 03 Jun 2018 14:50:04: 101000000 INFO @ Sun, 03 Jun 2018 14:50:06: 98000000 INFO @ Sun, 03 Jun 2018 14:50:07: 95000000 INFO @ Sun, 03 Jun 2018 14:50:09: 102000000 INFO @ Sun, 03 Jun 2018 14:50:12: 99000000 INFO @ Sun, 03 Jun 2018 14:50:12: 96000000 INFO @ Sun, 03 Jun 2018 14:50:15: 103000000 INFO @ Sun, 03 Jun 2018 14:50:17: 100000000 INFO @ Sun, 03 Jun 2018 14:50:18: 97000000 INFO @ Sun, 03 Jun 2018 14:50:20: 104000000 INFO @ Sun, 03 Jun 2018 14:50:22: 101000000 INFO @ Sun, 03 Jun 2018 14:50:23: 98000000 INFO @ Sun, 03 Jun 2018 14:50:26: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:50:26: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:50:26: #1 total tags in treatment: 45101551 INFO @ Sun, 03 Jun 2018 14:50:26: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:50:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:50:27: #1 tags after filtering in treatment: 32324046 INFO @ Sun, 03 Jun 2018 14:50:27: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 14:50:27: #1 finished! INFO @ Sun, 03 Jun 2018 14:50:27: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:50:27: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:50:28: 102000000 INFO @ Sun, 03 Jun 2018 14:50:29: 99000000 INFO @ Sun, 03 Jun 2018 14:50:29: #2 number of paired peaks: 48 WARNING @ Sun, 03 Jun 2018 14:50:29: Too few paired peaks (48) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:50:29: Process for pairing-model is terminated! cat: SRX4085352.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085352.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:50:33: 103000000 INFO @ Sun, 03 Jun 2018 14:50:34: 100000000 INFO @ Sun, 03 Jun 2018 14:50:38: 104000000 INFO @ Sun, 03 Jun 2018 14:50:39: 101000000 INFO @ Sun, 03 Jun 2018 14:50:44: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:50:44: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:50:44: #1 total tags in treatment: 45101551 INFO @ Sun, 03 Jun 2018 14:50:44: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:50:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:50:45: 102000000 INFO @ Sun, 03 Jun 2018 14:50:45: #1 tags after filtering in treatment: 32324046 INFO @ Sun, 03 Jun 2018 14:50:45: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 14:50:45: #1 finished! INFO @ Sun, 03 Jun 2018 14:50:45: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:50:45: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:50:47: #2 number of paired peaks: 48 WARNING @ Sun, 03 Jun 2018 14:50:47: Too few paired peaks (48) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:50:47: Process for pairing-model is terminated! cat: SRX4085352.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085352.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Sun, 03 Jun 2018 14:50:50: 103000000 INFO @ Sun, 03 Jun 2018 14:50:55: 104000000 INFO @ Sun, 03 Jun 2018 14:51:00: #1 tag size is determined as 51 bps INFO @ Sun, 03 Jun 2018 14:51:00: #1 tag size = 51 INFO @ Sun, 03 Jun 2018 14:51:00: #1 total tags in treatment: 45101551 INFO @ Sun, 03 Jun 2018 14:51:00: #1 user defined the maximum tags... INFO @ Sun, 03 Jun 2018 14:51:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 03 Jun 2018 14:51:01: #1 tags after filtering in treatment: 32324046 INFO @ Sun, 03 Jun 2018 14:51:01: #1 Redundant rate of treatment: 0.28 INFO @ Sun, 03 Jun 2018 14:51:01: #1 finished! INFO @ Sun, 03 Jun 2018 14:51:01: #2 Build Peak Model... INFO @ Sun, 03 Jun 2018 14:51:01: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 03 Jun 2018 14:51:03: #2 number of paired peaks: 48 WARNING @ Sun, 03 Jun 2018 14:51:03: Too few paired peaks (48) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 03 Jun 2018 14:51:03: Process for pairing-model is terminated! cat: SRX4085352.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4085352.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4085352.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。