Job ID = 12264772 SRX = SRX3141083 Genome = ce10 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 62163267 spots for SRR5985089/SRR5985089.sra Written 62163267 spots for SRR5985089/SRR5985089.sra fastq に変換しました。 bowtie でマッピング中... Your job 12265595 ("srTce11") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:53:37 62163267 reads; of these: 62163267 (100.00%) were paired; of these: 32898252 (52.92%) aligned concordantly 0 times 23673991 (38.08%) aligned concordantly exactly 1 time 5591024 (8.99%) aligned concordantly >1 times ---- 32898252 pairs aligned concordantly 0 times; of these: 4115843 (12.51%) aligned discordantly 1 time ---- 28782409 pairs aligned 0 times concordantly or discordantly; of these: 57564818 mates make up the pairs; of these: 54985945 (95.52%) aligned 0 times 819509 (1.42%) aligned exactly 1 time 1759364 (3.06%) aligned >1 times 55.77% overall alignment rate Time searching: 00:53:37 Overall time: 00:53:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 12318740 / 33014743 = 0.3731 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:43:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:43:38: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:43:38: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:43:44: 1000000 INFO @ Sat, 03 Apr 2021 07:43:50: 2000000 INFO @ Sat, 03 Apr 2021 07:43:57: 3000000 INFO @ Sat, 03 Apr 2021 07:44:03: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:44:08: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:44:08: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:44:08: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:44:10: 5000000 INFO @ Sat, 03 Apr 2021 07:44:15: 1000000 INFO @ Sat, 03 Apr 2021 07:44:16: 6000000 INFO @ Sat, 03 Apr 2021 07:44:22: 2000000 INFO @ Sat, 03 Apr 2021 07:44:24: 7000000 INFO @ Sat, 03 Apr 2021 07:44:29: 3000000 INFO @ Sat, 03 Apr 2021 07:44:30: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.7.1/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 03 Apr 2021 07:44:36: 4000000 INFO @ Sat, 03 Apr 2021 07:44:37: 9000000 INFO @ Sat, 03 Apr 2021 07:44:38: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 03 Apr 2021 07:44:38: #1 read tag files... INFO @ Sat, 03 Apr 2021 07:44:38: #1 read treatment tags... INFO @ Sat, 03 Apr 2021 07:44:43: 5000000 INFO @ Sat, 03 Apr 2021 07:44:43: 10000000 INFO @ Sat, 03 Apr 2021 07:44:45: 1000000 INFO @ Sat, 03 Apr 2021 07:44:50: 6000000 INFO @ Sat, 03 Apr 2021 07:44:50: 11000000 INFO @ Sat, 03 Apr 2021 07:44:51: 2000000 INFO @ Sat, 03 Apr 2021 07:44:57: 7000000 INFO @ Sat, 03 Apr 2021 07:44:57: 12000000 INFO @ Sat, 03 Apr 2021 07:44:58: 3000000 INFO @ Sat, 03 Apr 2021 07:45:04: 8000000 INFO @ Sat, 03 Apr 2021 07:45:04: 13000000 INFO @ Sat, 03 Apr 2021 07:45:05: 4000000 INFO @ Sat, 03 Apr 2021 07:45:10: 9000000 INFO @ Sat, 03 Apr 2021 07:45:11: 14000000 INFO @ Sat, 03 Apr 2021 07:45:11: 5000000 INFO @ Sat, 03 Apr 2021 07:45:18: 10000000 INFO @ Sat, 03 Apr 2021 07:45:18: 6000000 INFO @ Sat, 03 Apr 2021 07:45:18: 15000000 INFO @ Sat, 03 Apr 2021 07:45:24: 7000000 INFO @ Sat, 03 Apr 2021 07:45:25: 11000000 INFO @ Sat, 03 Apr 2021 07:45:25: 16000000 INFO @ Sat, 03 Apr 2021 07:45:31: 8000000 INFO @ Sat, 03 Apr 2021 07:45:32: 12000000 INFO @ Sat, 03 Apr 2021 07:45:32: 17000000 INFO @ Sat, 03 Apr 2021 07:45:38: 9000000 INFO @ Sat, 03 Apr 2021 07:45:39: 13000000 INFO @ Sat, 03 Apr 2021 07:45:39: 18000000 INFO @ Sat, 03 Apr 2021 07:45:44: 10000000 INFO @ Sat, 03 Apr 2021 07:45:46: 14000000 INFO @ Sat, 03 Apr 2021 07:45:46: 19000000 INFO @ Sat, 03 Apr 2021 07:45:51: 11000000 INFO @ Sat, 03 Apr 2021 07:45:53: 20000000 INFO @ Sat, 03 Apr 2021 07:45:53: 15000000 INFO @ Sat, 03 Apr 2021 07:45:57: 12000000 INFO @ Sat, 03 Apr 2021 07:46:00: 21000000 INFO @ Sat, 03 Apr 2021 07:46:01: 16000000 INFO @ Sat, 03 Apr 2021 07:46:04: 13000000 INFO @ Sat, 03 Apr 2021 07:46:07: 22000000 INFO @ Sat, 03 Apr 2021 07:46:07: 17000000 INFO @ Sat, 03 Apr 2021 07:46:10: 14000000 INFO @ Sat, 03 Apr 2021 07:46:13: 23000000 INFO @ Sat, 03 Apr 2021 07:46:14: 18000000 INFO @ Sat, 03 Apr 2021 07:46:17: 15000000 INFO @ Sat, 03 Apr 2021 07:46:20: 24000000 INFO @ Sat, 03 Apr 2021 07:46:21: 19000000 INFO @ Sat, 03 Apr 2021 07:46:24: 16000000 INFO @ Sat, 03 Apr 2021 07:46:27: 25000000 INFO @ Sat, 03 Apr 2021 07:46:28: 20000000 INFO @ Sat, 03 Apr 2021 07:46:30: 17000000 INFO @ Sat, 03 Apr 2021 07:46:33: 26000000 INFO @ Sat, 03 Apr 2021 07:46:34: 21000000 INFO @ Sat, 03 Apr 2021 07:46:37: 18000000 INFO @ Sat, 03 Apr 2021 07:46:40: 27000000 INFO @ Sat, 03 Apr 2021 07:46:41: 22000000 INFO @ Sat, 03 Apr 2021 07:46:43: 19000000 INFO @ Sat, 03 Apr 2021 07:46:47: 28000000 INFO @ Sat, 03 Apr 2021 07:46:47: 23000000 INFO @ Sat, 03 Apr 2021 07:46:49: 20000000 INFO @ Sat, 03 Apr 2021 07:46:53: 29000000 INFO @ Sat, 03 Apr 2021 07:46:54: 24000000 INFO @ Sat, 03 Apr 2021 07:46:56: 21000000 INFO @ Sat, 03 Apr 2021 07:46:59: 30000000 INFO @ Sat, 03 Apr 2021 07:47:00: 25000000 INFO @ Sat, 03 Apr 2021 07:47:02: 22000000 INFO @ Sat, 03 Apr 2021 07:47:06: 31000000 INFO @ Sat, 03 Apr 2021 07:47:07: 26000000 INFO @ Sat, 03 Apr 2021 07:47:09: 23000000 INFO @ Sat, 03 Apr 2021 07:47:12: 32000000 INFO @ Sat, 03 Apr 2021 07:47:14: 27000000 INFO @ Sat, 03 Apr 2021 07:47:15: 24000000 INFO @ Sat, 03 Apr 2021 07:47:18: 33000000 INFO @ Sat, 03 Apr 2021 07:47:20: 28000000 INFO @ Sat, 03 Apr 2021 07:47:21: 25000000 INFO @ Sat, 03 Apr 2021 07:47:25: 34000000 INFO @ Sat, 03 Apr 2021 07:47:27: 29000000 INFO @ Sat, 03 Apr 2021 07:47:28: 26000000 INFO @ Sat, 03 Apr 2021 07:47:32: 35000000 INFO @ Sat, 03 Apr 2021 07:47:34: 30000000 INFO @ Sat, 03 Apr 2021 07:47:35: 27000000 INFO @ Sat, 03 Apr 2021 07:47:38: 36000000 INFO @ Sat, 03 Apr 2021 07:47:40: 31000000 INFO @ Sat, 03 Apr 2021 07:47:41: 28000000 INFO @ Sat, 03 Apr 2021 07:47:45: 37000000 INFO @ Sat, 03 Apr 2021 07:47:47: 32000000 INFO @ Sat, 03 Apr 2021 07:47:47: 29000000 INFO @ Sat, 03 Apr 2021 07:47:51: 38000000 INFO @ Sat, 03 Apr 2021 07:47:53: 33000000 INFO @ Sat, 03 Apr 2021 07:47:54: 30000000 INFO @ Sat, 03 Apr 2021 07:47:58: 39000000 INFO @ Sat, 03 Apr 2021 07:48:00: 34000000 INFO @ Sat, 03 Apr 2021 07:48:00: 31000000 INFO @ Sat, 03 Apr 2021 07:48:04: 40000000 INFO @ Sat, 03 Apr 2021 07:48:06: 35000000 INFO @ Sat, 03 Apr 2021 07:48:06: 32000000 INFO @ Sat, 03 Apr 2021 07:48:10: 41000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 03 Apr 2021 07:48:12: 33000000 INFO @ Sat, 03 Apr 2021 07:48:13: 36000000 INFO @ Sat, 03 Apr 2021 07:48:17: 42000000 INFO @ Sat, 03 Apr 2021 07:48:19: 34000000 INFO @ Sat, 03 Apr 2021 07:48:19: 37000000 INFO @ Sat, 03 Apr 2021 07:48:23: 43000000 INFO @ Sat, 03 Apr 2021 07:48:25: 35000000 INFO @ Sat, 03 Apr 2021 07:48:26: 38000000 INFO @ Sat, 03 Apr 2021 07:48:29: 44000000 INFO @ Sat, 03 Apr 2021 07:48:31: 36000000 INFO @ Sat, 03 Apr 2021 07:48:32: 39000000 INFO @ Sat, 03 Apr 2021 07:48:34: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:48:34: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:48:34: #1 total tags in treatment: 18467282 INFO @ Sat, 03 Apr 2021 07:48:34: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:48:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:48:34: #1 tags after filtering in treatment: 12499754 INFO @ Sat, 03 Apr 2021 07:48:34: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:48:34: #1 finished! INFO @ Sat, 03 Apr 2021 07:48:34: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:48:34: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:48:35: #2 number of paired peaks: 417 WARNING @ Sat, 03 Apr 2021 07:48:35: Fewer paired peaks (417) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 417 pairs to build model! INFO @ Sat, 03 Apr 2021 07:48:35: start model_add_line... INFO @ Sat, 03 Apr 2021 07:48:35: start X-correlation... INFO @ Sat, 03 Apr 2021 07:48:35: end of X-cor INFO @ Sat, 03 Apr 2021 07:48:35: #2 finished! INFO @ Sat, 03 Apr 2021 07:48:35: #2 predicted fragment length is 98 bps INFO @ Sat, 03 Apr 2021 07:48:35: #2 alternative fragment length(s) may be 98 bps INFO @ Sat, 03 Apr 2021 07:48:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05_model.r WARNING @ Sat, 03 Apr 2021 07:48:35: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:48:35: #2 You may need to consider one of the other alternative d(s): 98 WARNING @ Sat, 03 Apr 2021 07:48:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:48:35: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:48:35: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:48:38: 37000000 INFO @ Sat, 03 Apr 2021 07:48:38: 40000000 INFO @ Sat, 03 Apr 2021 07:48:44: 38000000 INFO @ Sat, 03 Apr 2021 07:48:44: 41000000 INFO @ Sat, 03 Apr 2021 07:48:50: 39000000 INFO @ Sat, 03 Apr 2021 07:48:50: 42000000 INFO @ Sat, 03 Apr 2021 07:48:56: 40000000 INFO @ Sat, 03 Apr 2021 07:48:56: 43000000 INFO @ Sat, 03 Apr 2021 07:48:58: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:49:02: 44000000 INFO @ Sat, 03 Apr 2021 07:49:02: 41000000 INFO @ Sat, 03 Apr 2021 07:49:07: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:49:07: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:49:07: #1 total tags in treatment: 18467282 INFO @ Sat, 03 Apr 2021 07:49:07: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:49:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:49:08: #1 tags after filtering in treatment: 12499754 INFO @ Sat, 03 Apr 2021 07:49:08: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:49:08: #1 finished! INFO @ Sat, 03 Apr 2021 07:49:08: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:49:08: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:49:09: #2 number of paired peaks: 417 WARNING @ Sat, 03 Apr 2021 07:49:09: Fewer paired peaks (417) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 417 pairs to build model! INFO @ Sat, 03 Apr 2021 07:49:09: start model_add_line... INFO @ Sat, 03 Apr 2021 07:49:09: start X-correlation... INFO @ Sat, 03 Apr 2021 07:49:09: end of X-cor INFO @ Sat, 03 Apr 2021 07:49:09: #2 finished! INFO @ Sat, 03 Apr 2021 07:49:09: #2 predicted fragment length is 98 bps INFO @ Sat, 03 Apr 2021 07:49:09: #2 alternative fragment length(s) may be 98 bps INFO @ Sat, 03 Apr 2021 07:49:09: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10_model.r WARNING @ Sat, 03 Apr 2021 07:49:09: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:49:09: #2 You may need to consider one of the other alternative d(s): 98 WARNING @ Sat, 03 Apr 2021 07:49:09: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:49:09: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:49:09: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:49:09: 42000000 INFO @ Sat, 03 Apr 2021 07:49:10: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05_peaks.xls INFO @ Sat, 03 Apr 2021 07:49:10: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:49:10: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.05_summits.bed INFO @ Sat, 03 Apr 2021 07:49:11: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (9222 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:49:15: 43000000 BigWig に変換しました。 INFO @ Sat, 03 Apr 2021 07:49:21: 44000000 INFO @ Sat, 03 Apr 2021 07:49:25: #1 tag size is determined as 76 bps INFO @ Sat, 03 Apr 2021 07:49:25: #1 tag size = 76 INFO @ Sat, 03 Apr 2021 07:49:25: #1 total tags in treatment: 18467282 INFO @ Sat, 03 Apr 2021 07:49:25: #1 user defined the maximum tags... INFO @ Sat, 03 Apr 2021 07:49:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 03 Apr 2021 07:49:26: #1 tags after filtering in treatment: 12499754 INFO @ Sat, 03 Apr 2021 07:49:26: #1 Redundant rate of treatment: 0.32 INFO @ Sat, 03 Apr 2021 07:49:26: #1 finished! INFO @ Sat, 03 Apr 2021 07:49:26: #2 Build Peak Model... INFO @ Sat, 03 Apr 2021 07:49:26: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 03 Apr 2021 07:49:27: #2 number of paired peaks: 417 WARNING @ Sat, 03 Apr 2021 07:49:27: Fewer paired peaks (417) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 417 pairs to build model! INFO @ Sat, 03 Apr 2021 07:49:27: start model_add_line... INFO @ Sat, 03 Apr 2021 07:49:27: start X-correlation... INFO @ Sat, 03 Apr 2021 07:49:27: end of X-cor INFO @ Sat, 03 Apr 2021 07:49:27: #2 finished! INFO @ Sat, 03 Apr 2021 07:49:27: #2 predicted fragment length is 98 bps INFO @ Sat, 03 Apr 2021 07:49:27: #2 alternative fragment length(s) may be 98 bps INFO @ Sat, 03 Apr 2021 07:49:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20_model.r WARNING @ Sat, 03 Apr 2021 07:49:27: #2 Since the d (98) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 03 Apr 2021 07:49:27: #2 You may need to consider one of the other alternative d(s): 98 WARNING @ Sat, 03 Apr 2021 07:49:27: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 03 Apr 2021 07:49:27: #3 Call peaks... INFO @ Sat, 03 Apr 2021 07:49:27: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 03 Apr 2021 07:49:31: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:49:43: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10_peaks.xls INFO @ Sat, 03 Apr 2021 07:49:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:49:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.10_summits.bed INFO @ Sat, 03 Apr 2021 07:49:43: Done! pass1 - making usageList (7 chroms): 2 millis pass2 - checking and writing primary data (5315 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sat, 03 Apr 2021 07:49:50: #3 Call peaks for each chromosome... INFO @ Sat, 03 Apr 2021 07:50:02: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20_peaks.xls INFO @ Sat, 03 Apr 2021 07:50:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20_peaks.narrowPeak INFO @ Sat, 03 Apr 2021 07:50:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX3141083/SRX3141083.20_summits.bed INFO @ Sat, 03 Apr 2021 07:50:02: Done! pass1 - making usageList (6 chroms): 1 millis pass2 - checking and writing primary data (2411 records, 4 fields): 4 millis CompletedMACS2peakCalling