Job ID = 1292007 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-06-02T08:15:25 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 29,741,337 reads read : 59,482,674 reads written : 59,482,674 rm: cannot remove ‘[DSE]RR*’: No such file or directory rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:32:36 29741337 reads; of these: 29741337 (100.00%) were paired; of these: 2678982 (9.01%) aligned concordantly 0 times 22268131 (74.87%) aligned concordantly exactly 1 time 4794224 (16.12%) aligned concordantly >1 times ---- 2678982 pairs aligned concordantly 0 times; of these: 1012340 (37.79%) aligned discordantly 1 time ---- 1666642 pairs aligned 0 times concordantly or discordantly; of these: 3333284 mates make up the pairs; of these: 2080319 (62.41%) aligned 0 times 769651 (23.09%) aligned exactly 1 time 483314 (14.50%) aligned >1 times 96.50% overall alignment rate Time searching: 00:32:36 Overall time: 00:32:36 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 1155084 / 28054626 = 0.0412 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 18:23:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:23:18: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:23:18: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:23:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:23:18: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:23:18: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:23:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:23:18: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:23:18: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:23:25: 1000000 INFO @ Sun, 02 Jun 2019 18:23:26: 1000000 INFO @ Sun, 02 Jun 2019 18:23:27: 1000000 INFO @ Sun, 02 Jun 2019 18:23:32: 2000000 INFO @ Sun, 02 Jun 2019 18:23:33: 2000000 INFO @ Sun, 02 Jun 2019 18:23:36: 2000000 INFO @ Sun, 02 Jun 2019 18:23:38: 3000000 INFO @ Sun, 02 Jun 2019 18:23:41: 3000000 INFO @ Sun, 02 Jun 2019 18:23:45: 3000000 INFO @ Sun, 02 Jun 2019 18:23:45: 4000000 INFO @ Sun, 02 Jun 2019 18:23:48: 4000000 INFO @ Sun, 02 Jun 2019 18:23:52: 5000000 INFO @ Sun, 02 Jun 2019 18:23:53: 4000000 INFO @ Sun, 02 Jun 2019 18:23:56: 5000000 INFO @ Sun, 02 Jun 2019 18:23:58: 6000000 INFO @ Sun, 02 Jun 2019 18:24:02: 5000000 INFO @ Sun, 02 Jun 2019 18:24:05: 7000000 INFO @ Sun, 02 Jun 2019 18:24:05: 6000000 INFO @ Sun, 02 Jun 2019 18:24:10: 6000000 INFO @ Sun, 02 Jun 2019 18:24:11: 8000000 INFO @ Sun, 02 Jun 2019 18:24:13: 7000000 INFO @ Sun, 02 Jun 2019 18:24:18: 9000000 INFO @ Sun, 02 Jun 2019 18:24:19: 7000000 INFO @ Sun, 02 Jun 2019 18:24:22: 8000000 INFO @ Sun, 02 Jun 2019 18:24:24: 10000000 INFO @ Sun, 02 Jun 2019 18:24:27: 8000000 INFO @ Sun, 02 Jun 2019 18:24:30: 9000000 INFO @ Sun, 02 Jun 2019 18:24:30: 11000000 INFO @ Sun, 02 Jun 2019 18:24:36: 9000000 INFO @ Sun, 02 Jun 2019 18:24:37: 12000000 INFO @ Sun, 02 Jun 2019 18:24:38: 10000000 INFO @ Sun, 02 Jun 2019 18:24:43: 13000000 INFO @ Sun, 02 Jun 2019 18:24:44: 10000000 INFO @ Sun, 02 Jun 2019 18:24:47: 11000000 INFO @ Sun, 02 Jun 2019 18:24:50: 14000000 INFO @ Sun, 02 Jun 2019 18:24:53: 11000000 INFO @ Sun, 02 Jun 2019 18:24:55: 12000000 INFO @ Sun, 02 Jun 2019 18:24:56: 15000000 INFO @ Sun, 02 Jun 2019 18:25:01: 12000000 INFO @ Sun, 02 Jun 2019 18:25:03: 16000000 INFO @ Sun, 02 Jun 2019 18:25:03: 13000000 INFO @ Sun, 02 Jun 2019 18:25:10: 17000000 INFO @ Sun, 02 Jun 2019 18:25:10: 13000000 INFO @ Sun, 02 Jun 2019 18:25:12: 14000000 INFO @ Sun, 02 Jun 2019 18:25:17: 18000000 INFO @ Sun, 02 Jun 2019 18:25:18: 14000000 INFO @ Sun, 02 Jun 2019 18:25:20: 15000000 INFO @ Sun, 02 Jun 2019 18:25:24: 19000000 INFO @ Sun, 02 Jun 2019 18:25:27: 15000000 INFO @ Sun, 02 Jun 2019 18:25:28: 16000000 INFO @ Sun, 02 Jun 2019 18:25:30: 20000000 INFO @ Sun, 02 Jun 2019 18:25:36: 16000000 INFO @ Sun, 02 Jun 2019 18:25:37: 17000000 INFO @ Sun, 02 Jun 2019 18:25:38: 21000000 INFO @ Sun, 02 Jun 2019 18:25:44: 17000000 INFO @ Sun, 02 Jun 2019 18:25:44: 22000000 INFO @ Sun, 02 Jun 2019 18:25:45: 18000000 INFO @ Sun, 02 Jun 2019 18:25:51: 23000000 INFO @ Sun, 02 Jun 2019 18:25:52: 18000000 INFO @ Sun, 02 Jun 2019 18:25:53: 19000000 INFO @ Sun, 02 Jun 2019 18:25:58: 24000000 INFO @ Sun, 02 Jun 2019 18:26:00: 19000000 INFO @ Sun, 02 Jun 2019 18:26:01: 20000000 INFO @ Sun, 02 Jun 2019 18:26:04: 25000000 INFO @ Sun, 02 Jun 2019 18:26:09: 20000000 INFO @ Sun, 02 Jun 2019 18:26:10: 21000000 INFO @ Sun, 02 Jun 2019 18:26:10: 26000000 INFO @ Sun, 02 Jun 2019 18:26:17: 27000000 INFO @ Sun, 02 Jun 2019 18:26:17: 21000000 INFO @ Sun, 02 Jun 2019 18:26:18: 22000000 INFO @ Sun, 02 Jun 2019 18:26:24: 28000000 INFO @ Sun, 02 Jun 2019 18:26:26: 22000000 INFO @ Sun, 02 Jun 2019 18:26:27: 23000000 INFO @ Sun, 02 Jun 2019 18:26:30: 29000000 INFO @ Sun, 02 Jun 2019 18:26:34: 23000000 INFO @ Sun, 02 Jun 2019 18:26:35: 24000000 INFO @ Sun, 02 Jun 2019 18:26:37: 30000000 INFO @ Sun, 02 Jun 2019 18:26:43: 24000000 INFO @ Sun, 02 Jun 2019 18:26:43: 31000000 INFO @ Sun, 02 Jun 2019 18:26:44: 25000000 INFO @ Sun, 02 Jun 2019 18:26:50: 32000000 INFO @ Sun, 02 Jun 2019 18:26:51: 25000000 INFO @ Sun, 02 Jun 2019 18:26:52: 26000000 INFO @ Sun, 02 Jun 2019 18:26:56: 33000000 INFO @ Sun, 02 Jun 2019 18:27:00: 26000000 INFO @ Sun, 02 Jun 2019 18:27:01: 27000000 INFO @ Sun, 02 Jun 2019 18:27:03: 34000000 INFO @ Sun, 02 Jun 2019 18:27:09: 27000000 INFO @ Sun, 02 Jun 2019 18:27:09: 35000000 INFO @ Sun, 02 Jun 2019 18:27:10: 28000000 INFO @ Sun, 02 Jun 2019 18:27:16: 36000000 INFO @ Sun, 02 Jun 2019 18:27:18: 28000000 INFO @ Sun, 02 Jun 2019 18:27:18: 29000000 INFO @ Sun, 02 Jun 2019 18:27:22: 37000000 INFO @ Sun, 02 Jun 2019 18:27:27: 29000000 INFO @ Sun, 02 Jun 2019 18:27:27: 30000000 INFO @ Sun, 02 Jun 2019 18:27:28: 38000000 INFO @ Sun, 02 Jun 2019 18:27:35: 39000000 INFO @ Sun, 02 Jun 2019 18:27:36: 31000000 INFO @ Sun, 02 Jun 2019 18:27:36: 30000000 INFO @ Sun, 02 Jun 2019 18:27:41: 40000000 INFO @ Sun, 02 Jun 2019 18:27:44: 32000000 INFO @ Sun, 02 Jun 2019 18:27:44: 31000000 INFO @ Sun, 02 Jun 2019 18:27:48: 41000000 INFO @ Sun, 02 Jun 2019 18:27:53: 33000000 INFO @ Sun, 02 Jun 2019 18:27:53: 32000000 INFO @ Sun, 02 Jun 2019 18:27:54: 42000000 INFO @ Sun, 02 Jun 2019 18:28:01: 43000000 INFO @ Sun, 02 Jun 2019 18:28:01: 34000000 INFO @ Sun, 02 Jun 2019 18:28:02: 33000000 INFO @ Sun, 02 Jun 2019 18:28:07: 44000000 INFO @ Sun, 02 Jun 2019 18:28:10: 35000000 INFO @ Sun, 02 Jun 2019 18:28:11: 34000000 INFO @ Sun, 02 Jun 2019 18:28:13: 45000000 INFO @ Sun, 02 Jun 2019 18:28:18: 36000000 INFO @ Sun, 02 Jun 2019 18:28:19: 35000000 INFO @ Sun, 02 Jun 2019 18:28:20: 46000000 INFO @ Sun, 02 Jun 2019 18:28:26: 47000000 INFO @ Sun, 02 Jun 2019 18:28:26: 37000000 INFO @ Sun, 02 Jun 2019 18:28:28: 36000000 INFO @ Sun, 02 Jun 2019 18:28:33: 48000000 INFO @ Sun, 02 Jun 2019 18:28:35: 38000000 INFO @ Sun, 02 Jun 2019 18:28:37: 37000000 INFO @ Sun, 02 Jun 2019 18:28:39: 49000000 INFO @ Sun, 02 Jun 2019 18:28:43: 39000000 INFO @ Sun, 02 Jun 2019 18:28:45: 38000000 INFO @ Sun, 02 Jun 2019 18:28:45: 50000000 INFO @ Sun, 02 Jun 2019 18:28:51: 40000000 INFO @ Sun, 02 Jun 2019 18:28:52: 51000000 INFO @ Sun, 02 Jun 2019 18:28:54: 39000000 INFO @ Sun, 02 Jun 2019 18:28:58: 52000000 INFO @ Sun, 02 Jun 2019 18:28:59: 41000000 INFO @ Sun, 02 Jun 2019 18:29:02: 40000000 INFO @ Sun, 02 Jun 2019 18:29:04: 53000000 INFO @ Sun, 02 Jun 2019 18:29:08: 42000000 INFO @ Sun, 02 Jun 2019 18:29:11: 41000000 INFO @ Sun, 02 Jun 2019 18:29:11: 54000000 INFO @ Sun, 02 Jun 2019 18:29:16: 43000000 INFO @ Sun, 02 Jun 2019 18:29:17: 55000000 INFO @ Sun, 02 Jun 2019 18:29:18: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 18:29:18: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 18:29:18: #1 total tags in treatment: 25913900 INFO @ Sun, 02 Jun 2019 18:29:18: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:29:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:29:19: #1 tags after filtering in treatment: 20547408 INFO @ Sun, 02 Jun 2019 18:29:19: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 02 Jun 2019 18:29:19: #1 finished! INFO @ Sun, 02 Jun 2019 18:29:19: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:29:19: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:29:19: 42000000 INFO @ Sun, 02 Jun 2019 18:29:21: #2 number of paired peaks: 301 WARNING @ Sun, 02 Jun 2019 18:29:21: Fewer paired peaks (301) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 301 pairs to build model! INFO @ Sun, 02 Jun 2019 18:29:21: start model_add_line... INFO @ Sun, 02 Jun 2019 18:29:21: start X-correlation... INFO @ Sun, 02 Jun 2019 18:29:21: end of X-cor INFO @ Sun, 02 Jun 2019 18:29:21: #2 finished! INFO @ Sun, 02 Jun 2019 18:29:21: #2 predicted fragment length is 134 bps INFO @ Sun, 02 Jun 2019 18:29:21: #2 alternative fragment length(s) may be 3,134,138 bps INFO @ Sun, 02 Jun 2019 18:29:21: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10_model.r INFO @ Sun, 02 Jun 2019 18:29:21: #3 Call peaks... INFO @ Sun, 02 Jun 2019 18:29:21: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 18:29:24: 44000000 INFO @ Sun, 02 Jun 2019 18:29:28: 43000000 INFO @ Sun, 02 Jun 2019 18:29:32: 45000000 INFO @ Sun, 02 Jun 2019 18:29:36: 44000000 INFO @ Sun, 02 Jun 2019 18:29:41: 46000000 INFO @ Sun, 02 Jun 2019 18:29:44: 45000000 INFO @ Sun, 02 Jun 2019 18:29:49: 47000000 INFO @ Sun, 02 Jun 2019 18:29:53: 46000000 INFO @ Sun, 02 Jun 2019 18:29:57: 48000000 INFO @ Sun, 02 Jun 2019 18:30:01: 47000000 INFO @ Sun, 02 Jun 2019 18:30:05: 49000000 INFO @ Sun, 02 Jun 2019 18:30:10: 48000000 INFO @ Sun, 02 Jun 2019 18:30:13: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 18:30:13: 50000000 INFO @ Sun, 02 Jun 2019 18:30:18: 49000000 INFO @ Sun, 02 Jun 2019 18:30:22: 51000000 INFO @ Sun, 02 Jun 2019 18:30:26: 50000000 INFO @ Sun, 02 Jun 2019 18:30:30: 52000000 INFO @ Sun, 02 Jun 2019 18:30:35: 51000000 INFO @ Sun, 02 Jun 2019 18:30:37: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10_peaks.xls INFO @ Sun, 02 Jun 2019 18:30:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 18:30:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.10_summits.bed INFO @ Sun, 02 Jun 2019 18:30:38: Done! INFO @ Sun, 02 Jun 2019 18:30:38: 53000000 pass1 - making usageList (7 chroms): 4 millis pass2 - checking and writing primary data (17781 records, 4 fields): 22 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:30:43: 52000000 INFO @ Sun, 02 Jun 2019 18:30:46: 54000000 INFO @ Sun, 02 Jun 2019 18:30:51: 53000000 INFO @ Sun, 02 Jun 2019 18:30:54: 55000000 INFO @ Sun, 02 Jun 2019 18:30:55: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 18:30:55: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 18:30:55: #1 total tags in treatment: 25913900 INFO @ Sun, 02 Jun 2019 18:30:55: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:30:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:30:56: #1 tags after filtering in treatment: 20547408 INFO @ Sun, 02 Jun 2019 18:30:56: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 02 Jun 2019 18:30:56: #1 finished! INFO @ Sun, 02 Jun 2019 18:30:56: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:30:56: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:30:58: #2 number of paired peaks: 301 WARNING @ Sun, 02 Jun 2019 18:30:58: Fewer paired peaks (301) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 301 pairs to build model! INFO @ Sun, 02 Jun 2019 18:30:58: start model_add_line... INFO @ Sun, 02 Jun 2019 18:30:58: start X-correlation... INFO @ Sun, 02 Jun 2019 18:30:58: end of X-cor INFO @ Sun, 02 Jun 2019 18:30:58: #2 finished! INFO @ Sun, 02 Jun 2019 18:30:58: #2 predicted fragment length is 134 bps INFO @ Sun, 02 Jun 2019 18:30:58: #2 alternative fragment length(s) may be 3,134,138 bps INFO @ Sun, 02 Jun 2019 18:30:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20_model.r INFO @ Sun, 02 Jun 2019 18:30:58: #3 Call peaks... INFO @ Sun, 02 Jun 2019 18:30:58: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 18:31:00: 54000000 INFO @ Sun, 02 Jun 2019 18:31:07: 55000000 INFO @ Sun, 02 Jun 2019 18:31:08: #1 tag size is determined as 50 bps INFO @ Sun, 02 Jun 2019 18:31:08: #1 tag size = 50 INFO @ Sun, 02 Jun 2019 18:31:08: #1 total tags in treatment: 25913900 INFO @ Sun, 02 Jun 2019 18:31:08: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:31:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:31:09: #1 tags after filtering in treatment: 20547408 INFO @ Sun, 02 Jun 2019 18:31:09: #1 Redundant rate of treatment: 0.21 INFO @ Sun, 02 Jun 2019 18:31:09: #1 finished! INFO @ Sun, 02 Jun 2019 18:31:09: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:31:09: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:31:10: #2 number of paired peaks: 301 WARNING @ Sun, 02 Jun 2019 18:31:10: Fewer paired peaks (301) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 301 pairs to build model! INFO @ Sun, 02 Jun 2019 18:31:10: start model_add_line... INFO @ Sun, 02 Jun 2019 18:31:11: start X-correlation... INFO @ Sun, 02 Jun 2019 18:31:11: end of X-cor INFO @ Sun, 02 Jun 2019 18:31:11: #2 finished! INFO @ Sun, 02 Jun 2019 18:31:11: #2 predicted fragment length is 134 bps INFO @ Sun, 02 Jun 2019 18:31:11: #2 alternative fragment length(s) may be 3,134,138 bps INFO @ Sun, 02 Jun 2019 18:31:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05_model.r INFO @ Sun, 02 Jun 2019 18:31:11: #3 Call peaks... INFO @ Sun, 02 Jun 2019 18:31:11: #3 Pre-compute pvalue-qvalue table... INFO @ Sun, 02 Jun 2019 18:31:49: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 18:32:03: #3 Call peaks for each chromosome... INFO @ Sun, 02 Jun 2019 18:32:13: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20_peaks.xls INFO @ Sun, 02 Jun 2019 18:32:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 18:32:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.20_summits.bed INFO @ Sun, 02 Jun 2019 18:32:13: Done! pass1 - making usageList (7 chroms): 3 millis pass2 - checking and writing primary data (6233 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:32:28: #4 Write output xls file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05_peaks.xls INFO @ Sun, 02 Jun 2019 18:32:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05_peaks.narrowPeak INFO @ Sun, 02 Jun 2019 18:32:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/ce10/SRX2978703/SRX2978703.05_summits.bed INFO @ Sun, 02 Jun 2019 18:32:28: Done! pass1 - making usageList (7 chroms): 11 millis pass2 - checking and writing primary data (30797 records, 4 fields): 38 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。