Job ID = 1291998 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... spots read : 33,910,439 reads read : 67,820,878 reads written : 33,910,439 reads 0-length : 33,910,439 spots read : 26,002,792 reads read : 52,005,584 reads written : 26,002,792 reads 0-length : 26,002,792 2019-06-02T08:25:26 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T08:25:26 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra49/SRR/005623/SRR5758254' 2019-06-02T08:25:26 fasterq-dump.2.9.6 err: cmn_iter.c cmn_get_table_names( 'SRR5758254' ).VDBManagerOpenDBRead() -> RC(rcNS,rcNoTarg,rcValidating,rcConnection,rcNotFound) 2019-06-02T08:25:50 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T08:25:50 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra49/SRR/005623/SRR5758254' 2019-06-02T08:25:50 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR5758254' ) -> RC(rcNS,rcNoTarg,rcValidating,rcConnection,rcNotFound) 2019-06-02T08:25:50 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcNS,rcNoTarg,rcValidating,rcConnection,rcNotFound) 2019-06-02T08:36:02 fasterq-dump.2.9.6 sys: connection not found while validating within network system module - Failed to Make Connection in KClientHttpOpen to 'sra-download-internal.ncbi.nlm.nih.gov:443' 2019-06-02T08:36:02 fasterq-dump.2.9.6 err: connection not found while validating within network system module - error with https open 'https://sra-download-internal.ncbi.nlm.nih.gov/traces/sra49/SRR/005623/SRR5758254' 2019-06-02T08:36:02 fasterq-dump.2.9.6 err: cmn_iter.c cmn_iter_open_db().VDBManagerOpenDBRead( 'SRR5758254' ) -> RC(rcNS,rcNoTarg,rcValidating,rcConnection,rcNotFound) 2019-06-02T08:36:02 fasterq-dump.2.9.6 err: make_fastq_iter() -> RC(rcNS,rcNoTarg,rcValidating,rcConnection,rcNotFound) spots read : 32,679,795 reads read : 65,359,590 reads written : 32,679,795 reads 0-length : 32,679,795 spots read : 32,528,916 reads read : 65,057,832 reads written : 32,528,916 reads 0-length : 32,528,916 rm: cannot remove ‘fastqDump_tmp*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:29:00 125121942 reads; of these: 125121942 (100.00%) were unpaired; of these: 21344052 (17.06%) aligned 0 times 84349240 (67.41%) aligned exactly 1 time 19428650 (15.53%) aligned >1 times 82.94% overall alignment rate Time searching: 00:29:00 Overall time: 00:29:00 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 44 files... [bam_rmdupse_core] 39605130 / 103777890 = 0.3816 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sun, 02 Jun 2019 18:48:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:48:05: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:48:05: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:48:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:48:05: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:48:05: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:48:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam -f BAM -g ce -n /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 02 Jun 2019 18:48:05: #1 read tag files... INFO @ Sun, 02 Jun 2019 18:48:05: #1 read treatment tags... INFO @ Sun, 02 Jun 2019 18:48:14: 1000000 INFO @ Sun, 02 Jun 2019 18:48:16: 1000000 INFO @ Sun, 02 Jun 2019 18:48:16: 1000000 INFO @ Sun, 02 Jun 2019 18:48:22: 2000000 INFO @ Sun, 02 Jun 2019 18:48:26: 2000000 INFO @ Sun, 02 Jun 2019 18:48:26: 2000000 INFO @ Sun, 02 Jun 2019 18:48:31: 3000000 INFO @ Sun, 02 Jun 2019 18:48:36: 3000000 INFO @ Sun, 02 Jun 2019 18:48:37: 3000000 INFO @ Sun, 02 Jun 2019 18:48:39: 4000000 INFO @ Sun, 02 Jun 2019 18:48:48: 5000000 INFO @ Sun, 02 Jun 2019 18:48:48: 4000000 INFO @ Sun, 02 Jun 2019 18:48:48: 4000000 INFO @ Sun, 02 Jun 2019 18:48:56: 6000000 INFO @ Sun, 02 Jun 2019 18:48:59: 5000000 INFO @ Sun, 02 Jun 2019 18:48:59: 5000000 INFO @ Sun, 02 Jun 2019 18:49:05: 7000000 INFO @ Sun, 02 Jun 2019 18:49:10: 6000000 INFO @ Sun, 02 Jun 2019 18:49:11: 6000000 INFO @ Sun, 02 Jun 2019 18:49:14: 8000000 INFO @ Sun, 02 Jun 2019 18:49:22: 7000000 INFO @ Sun, 02 Jun 2019 18:49:22: 7000000 INFO @ Sun, 02 Jun 2019 18:49:22: 9000000 INFO @ Sun, 02 Jun 2019 18:49:30: 10000000 INFO @ Sun, 02 Jun 2019 18:49:32: 8000000 INFO @ Sun, 02 Jun 2019 18:49:32: 8000000 INFO @ Sun, 02 Jun 2019 18:49:38: 11000000 INFO @ Sun, 02 Jun 2019 18:49:41: 9000000 INFO @ Sun, 02 Jun 2019 18:49:42: 9000000 INFO @ Sun, 02 Jun 2019 18:49:46: 12000000 INFO @ Sun, 02 Jun 2019 18:49:51: 10000000 INFO @ Sun, 02 Jun 2019 18:49:52: 10000000 INFO @ Sun, 02 Jun 2019 18:49:54: 13000000 INFO @ Sun, 02 Jun 2019 18:50:00: 11000000 INFO @ Sun, 02 Jun 2019 18:50:03: 11000000 INFO @ Sun, 02 Jun 2019 18:50:03: 14000000 INFO @ Sun, 02 Jun 2019 18:50:10: 12000000 INFO @ Sun, 02 Jun 2019 18:50:12: 15000000 INFO @ Sun, 02 Jun 2019 18:50:13: 12000000 INFO @ Sun, 02 Jun 2019 18:50:19: 13000000 INFO @ Sun, 02 Jun 2019 18:50:20: 16000000 INFO @ Sun, 02 Jun 2019 18:50:23: 13000000 INFO @ Sun, 02 Jun 2019 18:50:28: 14000000 INFO @ Sun, 02 Jun 2019 18:50:29: 17000000 INFO @ Sun, 02 Jun 2019 18:50:33: 14000000 INFO @ Sun, 02 Jun 2019 18:50:37: 15000000 INFO @ Sun, 02 Jun 2019 18:50:38: 18000000 INFO @ Sun, 02 Jun 2019 18:50:43: 15000000 INFO @ Sun, 02 Jun 2019 18:50:46: 19000000 INFO @ Sun, 02 Jun 2019 18:50:47: 16000000 INFO @ Sun, 02 Jun 2019 18:50:53: 16000000 INFO @ Sun, 02 Jun 2019 18:50:55: 20000000 INFO @ Sun, 02 Jun 2019 18:50:56: 17000000 INFO @ Sun, 02 Jun 2019 18:51:04: 17000000 INFO @ Sun, 02 Jun 2019 18:51:04: 21000000 INFO @ Sun, 02 Jun 2019 18:51:05: 18000000 INFO @ Sun, 02 Jun 2019 18:51:13: 22000000 INFO @ Sun, 02 Jun 2019 18:51:14: 18000000 INFO @ Sun, 02 Jun 2019 18:51:14: 19000000 INFO @ Sun, 02 Jun 2019 18:51:21: 23000000 INFO @ Sun, 02 Jun 2019 18:51:23: 20000000 INFO @ Sun, 02 Jun 2019 18:51:24: 19000000 INFO @ Sun, 02 Jun 2019 18:51:30: 24000000 INFO @ Sun, 02 Jun 2019 18:51:33: 21000000 INFO @ Sun, 02 Jun 2019 18:51:34: 20000000 INFO @ Sun, 02 Jun 2019 18:51:39: 25000000 INFO @ Sun, 02 Jun 2019 18:51:43: 22000000 INFO @ Sun, 02 Jun 2019 18:51:44: 21000000 INFO @ Sun, 02 Jun 2019 18:51:47: 26000000 INFO @ Sun, 02 Jun 2019 18:51:52: 23000000 INFO @ Sun, 02 Jun 2019 18:51:55: 22000000 INFO @ Sun, 02 Jun 2019 18:51:56: 27000000 INFO @ Sun, 02 Jun 2019 18:52:01: 24000000 INFO @ Sun, 02 Jun 2019 18:52:04: 28000000 INFO @ Sun, 02 Jun 2019 18:52:05: 23000000 INFO @ Sun, 02 Jun 2019 18:52:11: 25000000 INFO @ Sun, 02 Jun 2019 18:52:13: 29000000 INFO @ Sun, 02 Jun 2019 18:52:15: 24000000 INFO @ Sun, 02 Jun 2019 18:52:20: 26000000 INFO @ Sun, 02 Jun 2019 18:52:21: 30000000 INFO @ Sun, 02 Jun 2019 18:52:25: 25000000 INFO @ Sun, 02 Jun 2019 18:52:29: 27000000 INFO @ Sun, 02 Jun 2019 18:52:30: 31000000 INFO @ Sun, 02 Jun 2019 18:52:35: 26000000 INFO @ Sun, 02 Jun 2019 18:52:38: 28000000 INFO @ Sun, 02 Jun 2019 18:52:38: 32000000 INFO @ Sun, 02 Jun 2019 18:52:46: 27000000 INFO @ Sun, 02 Jun 2019 18:52:47: 33000000 INFO @ Sun, 02 Jun 2019 18:52:47: 29000000 INFO @ Sun, 02 Jun 2019 18:52:55: 34000000 INFO @ Sun, 02 Jun 2019 18:52:55: 28000000 INFO @ Sun, 02 Jun 2019 18:52:56: 30000000 INFO @ Sun, 02 Jun 2019 18:53:04: 35000000 INFO @ Sun, 02 Jun 2019 18:53:05: 29000000 INFO @ Sun, 02 Jun 2019 18:53:05: 31000000 INFO @ Sun, 02 Jun 2019 18:53:13: 36000000 INFO @ Sun, 02 Jun 2019 18:53:14: 32000000 INFO @ Sun, 02 Jun 2019 18:53:14: 30000000 INFO @ Sun, 02 Jun 2019 18:53:21: 37000000 INFO @ Sun, 02 Jun 2019 18:53:23: 33000000 INFO @ Sun, 02 Jun 2019 18:53:23: 31000000 INFO @ Sun, 02 Jun 2019 18:53:30: 38000000 INFO @ Sun, 02 Jun 2019 18:53:32: 34000000 INFO @ Sun, 02 Jun 2019 18:53:33: 32000000 INFO @ Sun, 02 Jun 2019 18:53:39: 39000000 INFO @ Sun, 02 Jun 2019 18:53:41: 35000000 INFO @ Sun, 02 Jun 2019 18:53:42: 33000000 INFO @ Sun, 02 Jun 2019 18:53:47: 40000000 INFO @ Sun, 02 Jun 2019 18:53:51: 36000000 INFO @ Sun, 02 Jun 2019 18:53:52: 34000000 INFO @ Sun, 02 Jun 2019 18:53:56: 41000000 INFO @ Sun, 02 Jun 2019 18:54:00: 37000000 INFO @ Sun, 02 Jun 2019 18:54:01: 35000000 INFO @ Sun, 02 Jun 2019 18:54:04: 42000000 INFO @ Sun, 02 Jun 2019 18:54:09: 38000000 INFO @ Sun, 02 Jun 2019 18:54:11: 36000000 INFO @ Sun, 02 Jun 2019 18:54:12: 43000000 INFO @ Sun, 02 Jun 2019 18:54:18: 39000000 INFO @ Sun, 02 Jun 2019 18:54:20: 37000000 INFO @ Sun, 02 Jun 2019 18:54:21: 44000000 INFO @ Sun, 02 Jun 2019 18:54:27: 40000000 INFO @ Sun, 02 Jun 2019 18:54:29: 45000000 INFO @ Sun, 02 Jun 2019 18:54:30: 38000000 INFO @ Sun, 02 Jun 2019 18:54:36: 41000000 INFO @ Sun, 02 Jun 2019 18:54:38: 46000000 INFO @ Sun, 02 Jun 2019 18:54:39: 39000000 INFO @ Sun, 02 Jun 2019 18:54:45: 42000000 INFO @ Sun, 02 Jun 2019 18:54:47: 47000000 INFO @ Sun, 02 Jun 2019 18:54:48: 40000000 INFO @ Sun, 02 Jun 2019 18:54:54: 43000000 INFO @ Sun, 02 Jun 2019 18:54:55: 48000000 INFO @ Sun, 02 Jun 2019 18:54:58: 41000000 INFO @ Sun, 02 Jun 2019 18:55:03: 44000000 INFO @ Sun, 02 Jun 2019 18:55:04: 49000000 INFO @ Sun, 02 Jun 2019 18:55:07: 42000000 INFO @ Sun, 02 Jun 2019 18:55:12: 45000000 INFO @ Sun, 02 Jun 2019 18:55:12: 50000000 INFO @ Sun, 02 Jun 2019 18:55:16: 43000000 INFO @ Sun, 02 Jun 2019 18:55:21: 51000000 INFO @ Sun, 02 Jun 2019 18:55:21: 46000000 INFO @ Sun, 02 Jun 2019 18:55:26: 44000000 INFO @ Sun, 02 Jun 2019 18:55:30: 52000000 INFO @ Sun, 02 Jun 2019 18:55:31: 47000000 INFO @ Sun, 02 Jun 2019 18:55:36: 45000000 INFO @ Sun, 02 Jun 2019 18:55:39: 53000000 INFO @ Sun, 02 Jun 2019 18:55:41: 48000000 INFO @ Sun, 02 Jun 2019 18:55:46: 46000000 INFO @ Sun, 02 Jun 2019 18:55:48: 54000000 INFO @ Sun, 02 Jun 2019 18:55:50: 49000000 INFO @ Sun, 02 Jun 2019 18:55:57: 55000000 INFO @ Sun, 02 Jun 2019 18:55:59: 47000000 INFO @ Sun, 02 Jun 2019 18:56:00: 50000000 INFO @ Sun, 02 Jun 2019 18:56:06: 56000000 INFO @ Sun, 02 Jun 2019 18:56:09: 51000000 INFO @ Sun, 02 Jun 2019 18:56:10: 48000000 INFO @ Sun, 02 Jun 2019 18:56:15: 57000000 INFO @ Sun, 02 Jun 2019 18:56:18: 52000000 INFO @ Sun, 02 Jun 2019 18:56:21: 49000000 INFO @ Sun, 02 Jun 2019 18:56:23: 58000000 INFO @ Sun, 02 Jun 2019 18:56:27: 53000000 INFO @ Sun, 02 Jun 2019 18:56:31: 50000000 INFO @ Sun, 02 Jun 2019 18:56:31: 59000000 INFO @ Sun, 02 Jun 2019 18:56:36: 54000000 INFO @ Sun, 02 Jun 2019 18:56:39: 60000000 INFO @ Sun, 02 Jun 2019 18:56:40: 51000000 INFO @ Sun, 02 Jun 2019 18:56:45: 55000000 INFO @ Sun, 02 Jun 2019 18:56:47: 61000000 INFO @ Sun, 02 Jun 2019 18:56:49: 52000000 INFO @ Sun, 02 Jun 2019 18:56:54: 56000000 INFO @ Sun, 02 Jun 2019 18:56:56: 62000000 INFO @ Sun, 02 Jun 2019 18:56:58: 53000000 INFO @ Sun, 02 Jun 2019 18:57:03: 57000000 INFO @ Sun, 02 Jun 2019 18:57:04: 63000000 INFO @ Sun, 02 Jun 2019 18:57:08: 54000000 INFO @ Sun, 02 Jun 2019 18:57:12: 58000000 INFO @ Sun, 02 Jun 2019 18:57:12: 64000000 INFO @ Sun, 02 Jun 2019 18:57:14: #1 tag size is determined as 51 bps INFO @ Sun, 02 Jun 2019 18:57:14: #1 tag size = 51 INFO @ Sun, 02 Jun 2019 18:57:14: #1 total tags in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:57:14: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:57:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:57:15: #1 tags after filtering in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:57:15: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 02 Jun 2019 18:57:15: #1 finished! INFO @ Sun, 02 Jun 2019 18:57:15: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:57:15: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:57:17: 55000000 INFO @ Sun, 02 Jun 2019 18:57:20: #2 number of paired peaks: 0 WARNING @ Sun, 02 Jun 2019 18:57:20: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:57:20: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20_peaks.narrowPeak: No such file or directory INFO @ Sun, 02 Jun 2019 18:57:21: 59000000 pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:57:26: 56000000 INFO @ Sun, 02 Jun 2019 18:57:29: 60000000 INFO @ Sun, 02 Jun 2019 18:57:35: 57000000 INFO @ Sun, 02 Jun 2019 18:57:38: 61000000 INFO @ Sun, 02 Jun 2019 18:57:44: 58000000 INFO @ Sun, 02 Jun 2019 18:57:47: 62000000 INFO @ Sun, 02 Jun 2019 18:57:53: 59000000 INFO @ Sun, 02 Jun 2019 18:57:56: 63000000 INFO @ Sun, 02 Jun 2019 18:58:03: 60000000 INFO @ Sun, 02 Jun 2019 18:58:05: 64000000 INFO @ Sun, 02 Jun 2019 18:58:07: #1 tag size is determined as 51 bps INFO @ Sun, 02 Jun 2019 18:58:07: #1 tag size = 51 INFO @ Sun, 02 Jun 2019 18:58:07: #1 total tags in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:58:07: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:58:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:58:08: #1 tags after filtering in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:58:08: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 02 Jun 2019 18:58:08: #1 finished! INFO @ Sun, 02 Jun 2019 18:58:08: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:58:08: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:58:12: 61000000 INFO @ Sun, 02 Jun 2019 18:58:13: #2 number of paired peaks: 0 WARNING @ Sun, 02 Jun 2019 18:58:13: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:58:13: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 02 Jun 2019 18:58:21: 62000000 INFO @ Sun, 02 Jun 2019 18:58:30: 63000000 INFO @ Sun, 02 Jun 2019 18:58:39: 64000000 INFO @ Sun, 02 Jun 2019 18:58:41: #1 tag size is determined as 51 bps INFO @ Sun, 02 Jun 2019 18:58:41: #1 tag size = 51 INFO @ Sun, 02 Jun 2019 18:58:41: #1 total tags in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:58:41: #1 user defined the maximum tags... INFO @ Sun, 02 Jun 2019 18:58:41: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 02 Jun 2019 18:58:43: #1 tags after filtering in treatment: 64172760 INFO @ Sun, 02 Jun 2019 18:58:43: #1 Redundant rate of treatment: 0.00 INFO @ Sun, 02 Jun 2019 18:58:43: #1 finished! INFO @ Sun, 02 Jun 2019 18:58:43: #2 Build Peak Model... INFO @ Sun, 02 Jun 2019 18:58:43: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 02 Jun 2019 18:58:48: #2 number of paired peaks: 0 WARNING @ Sun, 02 Jun 2019 18:58:48: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 02 Jun 2019 18:58:48: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/ce10/SRX2958249/SRX2958249.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。