Job ID = 9157401 sra ファイルのダウンロード中... Completed: 2121213K bytes transferred in 22 seconds (780851K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 41044796 spots for /home/okishinya/chipatlas/results/ce10/SRX1995067/SRR3993999.sra Written 41044796 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:10 41044796 reads; of these: 41044796 (100.00%) were paired; of these: 2997866 (7.30%) aligned concordantly 0 times 31648313 (77.11%) aligned concordantly exactly 1 time 6398617 (15.59%) aligned concordantly >1 times ---- 2997866 pairs aligned concordantly 0 times; of these: 1219679 (40.68%) aligned discordantly 1 time ---- 1778187 pairs aligned 0 times concordantly or discordantly; of these: 3556374 mates make up the pairs; of these: 1977459 (55.60%) aligned 0 times 962045 (27.05%) aligned exactly 1 time 616870 (17.35%) aligned >1 times 97.59% overall alignment rate Time searching: 00:48:11 Overall time: 00:48:11 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 7 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] 624373 / 38406589 = 0.0163 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 27 Jun 2017 12:58:31: # Command line: callpeak -t SRX1995067.bam -f BAM -g ce -n SRX1995067.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1995067.20 # format = BAM # ChIP-seq file = ['SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 27 Jun 2017 12:58:31: #1 read tag files... INFO @ Tue, 27 Jun 2017 12:58:31: #1 read treatment tags... INFO @ Tue, 27 Jun 2017 12:58:31: # Command line: callpeak -t SRX1995067.bam -f BAM -g ce -n SRX1995067.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1995067.10 # format = BAM # ChIP-seq file = ['SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 27 Jun 2017 12:58:31: #1 read tag files... INFO @ Tue, 27 Jun 2017 12:58:31: #1 read treatment tags... INFO @ Tue, 27 Jun 2017 12:58:31: # Command line: callpeak -t SRX1995067.bam -f BAM -g ce -n SRX1995067.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1995067.05 # format = BAM # ChIP-seq file = ['SRX1995067.bam'] # control file = None # effective genome size = 9.00e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 27 Jun 2017 12:58:31: #1 read tag files... INFO @ Tue, 27 Jun 2017 12:58:31: #1 read treatment tags... INFO @ Tue, 27 Jun 2017 12:58:37: 1000000 INFO @ Tue, 27 Jun 2017 12:58:37: 1000000 INFO @ Tue, 27 Jun 2017 12:58:38: 1000000 INFO @ Tue, 27 Jun 2017 12:58:43: 2000000 INFO @ Tue, 27 Jun 2017 12:58:44: 2000000 INFO @ Tue, 27 Jun 2017 12:58:44: 2000000 INFO @ Tue, 27 Jun 2017 12:58:50: 3000000 INFO @ Tue, 27 Jun 2017 12:58:50: 3000000 INFO @ Tue, 27 Jun 2017 12:58:51: 3000000 INFO @ Tue, 27 Jun 2017 12:58:56: 4000000 INFO @ Tue, 27 Jun 2017 12:58:57: 4000000 INFO @ Tue, 27 Jun 2017 12:58:57: 4000000 INFO @ Tue, 27 Jun 2017 12:59:02: 5000000 INFO @ Tue, 27 Jun 2017 12:59:03: 5000000 INFO @ Tue, 27 Jun 2017 12:59:04: 5000000 INFO @ Tue, 27 Jun 2017 12:59:09: 6000000 INFO @ Tue, 27 Jun 2017 12:59:10: 6000000 INFO @ Tue, 27 Jun 2017 12:59:10: 6000000 INFO @ Tue, 27 Jun 2017 12:59:15: 7000000 INFO @ Tue, 27 Jun 2017 12:59:16: 7000000 INFO @ Tue, 27 Jun 2017 12:59:17: 7000000 INFO @ Tue, 27 Jun 2017 12:59:21: 8000000 INFO @ Tue, 27 Jun 2017 12:59:23: 8000000 INFO @ Tue, 27 Jun 2017 12:59:23: 8000000 INFO @ Tue, 27 Jun 2017 12:59:27: 9000000 INFO @ Tue, 27 Jun 2017 12:59:29: 9000000 INFO @ Tue, 27 Jun 2017 12:59:30: 9000000 INFO @ Tue, 27 Jun 2017 12:59:33: 10000000 INFO @ Tue, 27 Jun 2017 12:59:35: 10000000 INFO @ Tue, 27 Jun 2017 12:59:36: 10000000 INFO @ Tue, 27 Jun 2017 12:59:40: 11000000 INFO @ Tue, 27 Jun 2017 12:59:42: 11000000 INFO @ Tue, 27 Jun 2017 12:59:42: 11000000 INFO @ Tue, 27 Jun 2017 12:59:46: 12000000 INFO @ Tue, 27 Jun 2017 12:59:48: 12000000 INFO @ Tue, 27 Jun 2017 12:59:49: 12000000 INFO @ Tue, 27 Jun 2017 12:59:52: 13000000 INFO @ Tue, 27 Jun 2017 12:59:55: 13000000 INFO @ Tue, 27 Jun 2017 12:59:55: 13000000 INFO @ Tue, 27 Jun 2017 12:59:58: 14000000 INFO @ Tue, 27 Jun 2017 13:00:01: 14000000 INFO @ Tue, 27 Jun 2017 13:00:02: 14000000 INFO @ Tue, 27 Jun 2017 13:00:04: 15000000 INFO @ Tue, 27 Jun 2017 13:00:07: 15000000 INFO @ Tue, 27 Jun 2017 13:00:08: 15000000 INFO @ Tue, 27 Jun 2017 13:00:11: 16000000 INFO @ Tue, 27 Jun 2017 13:00:14: 16000000 INFO @ Tue, 27 Jun 2017 13:00:15: 16000000 INFO @ Tue, 27 Jun 2017 13:00:17: 17000000 INFO @ Tue, 27 Jun 2017 13:00:20: 17000000 INFO @ Tue, 27 Jun 2017 13:00:21: 17000000 INFO @ Tue, 27 Jun 2017 13:00:23: 18000000 INFO @ Tue, 27 Jun 2017 13:00:27: 18000000 INFO @ Tue, 27 Jun 2017 13:00:28: 18000000 INFO @ Tue, 27 Jun 2017 13:00:29: 19000000 INFO @ Tue, 27 Jun 2017 13:00:33: 19000000 INFO @ Tue, 27 Jun 2017 13:00:34: 19000000 INFO @ Tue, 27 Jun 2017 13:00:35: 20000000 INFO @ Tue, 27 Jun 2017 13:00:39: 20000000 INFO @ Tue, 27 Jun 2017 13:00:40: 20000000 INFO @ Tue, 27 Jun 2017 13:00:41: 21000000 INFO @ Tue, 27 Jun 2017 13:00:46: 21000000 INFO @ Tue, 27 Jun 2017 13:00:47: 21000000 INFO @ Tue, 27 Jun 2017 13:00:48: 22000000 INFO @ Tue, 27 Jun 2017 13:00:53: 23000000 INFO @ Tue, 27 Jun 2017 13:00:53: 22000000 INFO @ Tue, 27 Jun 2017 13:00:54: 22000000 INFO @ Tue, 27 Jun 2017 13:00:59: 24000000 INFO @ Tue, 27 Jun 2017 13:01:00: 23000000 INFO @ Tue, 27 Jun 2017 13:01:01: 23000000 INFO @ Tue, 27 Jun 2017 13:01:04: 25000000 INFO @ Tue, 27 Jun 2017 13:01:07: 24000000 INFO @ Tue, 27 Jun 2017 13:01:09: 24000000 INFO @ Tue, 27 Jun 2017 13:01:10: 26000000 INFO @ Tue, 27 Jun 2017 13:01:14: 25000000 INFO @ Tue, 27 Jun 2017 13:01:15: 27000000 INFO @ Tue, 27 Jun 2017 13:01:17: 25000000 INFO @ Tue, 27 Jun 2017 13:01:21: 28000000 INFO @ Tue, 27 Jun 2017 13:01:21: 26000000 INFO @ Tue, 27 Jun 2017 13:01:25: 26000000 INFO @ Tue, 27 Jun 2017 13:01:27: 29000000 INFO @ Tue, 27 Jun 2017 13:01:28: 27000000 INFO @ Tue, 27 Jun 2017 13:01:33: 27000000 INFO @ Tue, 27 Jun 2017 13:01:34: 30000000 INFO @ Tue, 27 Jun 2017 13:01:35: 28000000 INFO @ Tue, 27 Jun 2017 13:01:41: 31000000 INFO @ Tue, 27 Jun 2017 13:01:42: 28000000 INFO @ Tue, 27 Jun 2017 13:01:42: 29000000 INFO @ Tue, 27 Jun 2017 13:01:47: 32000000 INFO @ Tue, 27 Jun 2017 13:01:49: 30000000 INFO @ Tue, 27 Jun 2017 13:01:50: 29000000 INFO @ Tue, 27 Jun 2017 13:01:54: 33000000 INFO @ Tue, 27 Jun 2017 13:01:56: 31000000 INFO @ Tue, 27 Jun 2017 13:01:59: 30000000 INFO @ Tue, 27 Jun 2017 13:02:00: 34000000 INFO @ Tue, 27 Jun 2017 13:02:04: 32000000 INFO @ Tue, 27 Jun 2017 13:02:07: 35000000 INFO @ Tue, 27 Jun 2017 13:02:07: 31000000 INFO @ Tue, 27 Jun 2017 13:02:11: 33000000 INFO @ Tue, 27 Jun 2017 13:02:14: 36000000 INFO @ Tue, 27 Jun 2017 13:02:16: 32000000 INFO @ Tue, 27 Jun 2017 13:02:18: 34000000 INFO @ Tue, 27 Jun 2017 13:02:20: 37000000 INFO @ Tue, 27 Jun 2017 13:02:24: 33000000 INFO @ Tue, 27 Jun 2017 13:02:25: 35000000 INFO @ Tue, 27 Jun 2017 13:02:27: 38000000 INFO @ Tue, 27 Jun 2017 13:02:32: 36000000 INFO @ Tue, 27 Jun 2017 13:02:33: 34000000 INFO @ Tue, 27 Jun 2017 13:02:34: 39000000 INFO @ Tue, 27 Jun 2017 13:02:39: 37000000 INFO @ Tue, 27 Jun 2017 13:02:40: 40000000 INFO @ Tue, 27 Jun 2017 13:02:41: 35000000 INFO @ Tue, 27 Jun 2017 13:02:47: 38000000 INFO @ Tue, 27 Jun 2017 13:02:47: 41000000 INFO @ Tue, 27 Jun 2017 13:02:50: 36000000 INFO @ Tue, 27 Jun 2017 13:02:53: 42000000 INFO @ Tue, 27 Jun 2017 13:02:54: 39000000 INFO @ Tue, 27 Jun 2017 13:02:59: 37000000 INFO @ Tue, 27 Jun 2017 13:03:00: 43000000 INFO @ Tue, 27 Jun 2017 13:03:01: 40000000 INFO @ Tue, 27 Jun 2017 13:03:06: 44000000 INFO @ Tue, 27 Jun 2017 13:03:07: 38000000 INFO @ Tue, 27 Jun 2017 13:03:08: 41000000 INFO @ Tue, 27 Jun 2017 13:03:12: 45000000 INFO @ Tue, 27 Jun 2017 13:03:15: 42000000 INFO @ Tue, 27 Jun 2017 13:03:15: 39000000 INFO @ Tue, 27 Jun 2017 13:03:18: 46000000 INFO @ Tue, 27 Jun 2017 13:03:22: 43000000 INFO @ Tue, 27 Jun 2017 13:03:23: 47000000 INFO @ Tue, 27 Jun 2017 13:03:24: 40000000 INFO @ Tue, 27 Jun 2017 13:03:29: 48000000 INFO @ Tue, 27 Jun 2017 13:03:29: 44000000 INFO @ Tue, 27 Jun 2017 13:03:32: 41000000 INFO @ Tue, 27 Jun 2017 13:03:34: 49000000 INFO @ Tue, 27 Jun 2017 13:03:36: 45000000 INFO @ Tue, 27 Jun 2017 13:03:39: 50000000 INFO @ Tue, 27 Jun 2017 13:03:39: 42000000 INFO @ Tue, 27 Jun 2017 13:03:42: 46000000 INFO @ Tue, 27 Jun 2017 13:03:44: 51000000 INFO @ Tue, 27 Jun 2017 13:03:46: 43000000 INFO @ Tue, 27 Jun 2017 13:03:48: 47000000 INFO @ Tue, 27 Jun 2017 13:03:49: 52000000 INFO @ Tue, 27 Jun 2017 13:03:54: 44000000 INFO @ Tue, 27 Jun 2017 13:03:54: 53000000 INFO @ Tue, 27 Jun 2017 13:03:54: 48000000 INFO @ Tue, 27 Jun 2017 13:03:59: 54000000 INFO @ Tue, 27 Jun 2017 13:04:01: 49000000 INFO @ Tue, 27 Jun 2017 13:04:01: 45000000 INFO @ Tue, 27 Jun 2017 13:04:04: 55000000 INFO @ Tue, 27 Jun 2017 13:04:07: 50000000 INFO @ Tue, 27 Jun 2017 13:04:08: 46000000 INFO @ Tue, 27 Jun 2017 13:04:09: 56000000 INFO @ Tue, 27 Jun 2017 13:04:13: 51000000 INFO @ Tue, 27 Jun 2017 13:04:14: 57000000 INFO @ Tue, 27 Jun 2017 13:04:14: 47000000 INFO @ Tue, 27 Jun 2017 13:04:18: 52000000 INFO @ Tue, 27 Jun 2017 13:04:19: 58000000 INFO @ Tue, 27 Jun 2017 13:04:20: 48000000 INFO @ Tue, 27 Jun 2017 13:04:24: 53000000 INFO @ Tue, 27 Jun 2017 13:04:24: 59000000 INFO @ Tue, 27 Jun 2017 13:04:25: 49000000 INFO @ Tue, 27 Jun 2017 13:04:29: 54000000 INFO @ Tue, 27 Jun 2017 13:04:29: 60000000 INFO @ Tue, 27 Jun 2017 13:04:31: 50000000 INFO @ Tue, 27 Jun 2017 13:04:34: 55000000 INFO @ Tue, 27 Jun 2017 13:04:34: 61000000 INFO @ Tue, 27 Jun 2017 13:04:37: 51000000 INFO @ Tue, 27 Jun 2017 13:04:39: 56000000 INFO @ Tue, 27 Jun 2017 13:04:39: 62000000 INFO @ Tue, 27 Jun 2017 13:04:42: 52000000 INFO @ Tue, 27 Jun 2017 13:04:44: 63000000 INFO @ Tue, 27 Jun 2017 13:04:45: 57000000 INFO @ Tue, 27 Jun 2017 13:04:48: 53000000 INFO @ Tue, 27 Jun 2017 13:04:49: 64000000 INFO @ Tue, 27 Jun 2017 13:04:50: 58000000 INFO @ Tue, 27 Jun 2017 13:04:53: 54000000 INFO @ Tue, 27 Jun 2017 13:04:54: 65000000 INFO @ Tue, 27 Jun 2017 13:04:55: 59000000 INFO @ Tue, 27 Jun 2017 13:04:59: 55000000 INFO @ Tue, 27 Jun 2017 13:04:59: 66000000 INFO @ Tue, 27 Jun 2017 13:05:00: 60000000 INFO @ Tue, 27 Jun 2017 13:05:04: 56000000 INFO @ Tue, 27 Jun 2017 13:05:04: 67000000 INFO @ Tue, 27 Jun 2017 13:05:06: 61000000 INFO @ Tue, 27 Jun 2017 13:05:09: 68000000 INFO @ Tue, 27 Jun 2017 13:05:09: 57000000 INFO @ Tue, 27 Jun 2017 13:05:11: 62000000 INFO @ Tue, 27 Jun 2017 13:05:14: 69000000 INFO @ Tue, 27 Jun 2017 13:05:15: 58000000 INFO @ Tue, 27 Jun 2017 13:05:16: 63000000 INFO @ Tue, 27 Jun 2017 13:05:19: 70000000 INFO @ Tue, 27 Jun 2017 13:05:20: 59000000 INFO @ Tue, 27 Jun 2017 13:05:21: 64000000 INFO @ Tue, 27 Jun 2017 13:05:24: 71000000 INFO @ Tue, 27 Jun 2017 13:05:26: 60000000 INFO @ Tue, 27 Jun 2017 13:05:27: 65000000 INFO @ Tue, 27 Jun 2017 13:05:29: 72000000 INFO @ Tue, 27 Jun 2017 13:05:31: 61000000 INFO @ Tue, 27 Jun 2017 13:05:32: 66000000 INFO @ Tue, 27 Jun 2017 13:05:34: 73000000 INFO @ Tue, 27 Jun 2017 13:05:37: 62000000 INFO @ Tue, 27 Jun 2017 13:05:37: 67000000 INFO @ Tue, 27 Jun 2017 13:05:39: 74000000 INFO @ Tue, 27 Jun 2017 13:05:42: 63000000 INFO @ Tue, 27 Jun 2017 13:05:43: 68000000 INFO @ Tue, 27 Jun 2017 13:05:44: 75000000 INFO @ Tue, 27 Jun 2017 13:05:48: 69000000 INFO @ Tue, 27 Jun 2017 13:05:48: 64000000 INFO @ Tue, 27 Jun 2017 13:05:49: 76000000 INFO @ Tue, 27 Jun 2017 13:05:53: 70000000 INFO @ Tue, 27 Jun 2017 13:05:53: 65000000 INFO @ Tue, 27 Jun 2017 13:05:54: 77000000 INFO @ Tue, 27 Jun 2017 13:05:58: 71000000 INFO @ Tue, 27 Jun 2017 13:05:59: 66000000 INFO @ Tue, 27 Jun 2017 13:05:59: 78000000 INFO @ Tue, 27 Jun 2017 13:06:04: 72000000 INFO @ Tue, 27 Jun 2017 13:06:04: #1 tag size is determined as 50 bps INFO @ Tue, 27 Jun 2017 13:06:04: #1 tag size = 50 INFO @ Tue, 27 Jun 2017 13:06:04: #1 total tags in treatment: 37424801 INFO @ Tue, 27 Jun 2017 13:06:04: #1 user defined the maximum tags... INFO @ Tue, 27 Jun 2017 13:06:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 27 Jun 2017 13:06:05: #1 tags after filtering in treatment: 31614764 INFO @ Tue, 27 Jun 2017 13:06:05: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 27 Jun 2017 13:06:05: #1 finished! INFO @ Tue, 27 Jun 2017 13:06:05: #2 Build Peak Model... INFO @ Tue, 27 Jun 2017 13:06:05: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 27 Jun 2017 13:06:05: 67000000 INFO @ Tue, 27 Jun 2017 13:06:07: #2 number of paired peaks: 90 WARNING @ Tue, 27 Jun 2017 13:06:07: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 27 Jun 2017 13:06:07: Process for pairing-model is terminated! cat: SRX1995067.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1995067.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 27 Jun 2017 13:06:10: 73000000 INFO @ Tue, 27 Jun 2017 13:06:13: 68000000 INFO @ Tue, 27 Jun 2017 13:06:17: 74000000 INFO @ Tue, 27 Jun 2017 13:06:20: 69000000 INFO @ Tue, 27 Jun 2017 13:06:23: 75000000 INFO @ Tue, 27 Jun 2017 13:06:28: 70000000 INFO @ Tue, 27 Jun 2017 13:06:30: 76000000 INFO @ Tue, 27 Jun 2017 13:06:36: 71000000 INFO @ Tue, 27 Jun 2017 13:06:37: 77000000 INFO @ Tue, 27 Jun 2017 13:06:43: 78000000 INFO @ Tue, 27 Jun 2017 13:06:44: 72000000 INFO @ Tue, 27 Jun 2017 13:06:49: #1 tag size is determined as 50 bps INFO @ Tue, 27 Jun 2017 13:06:49: #1 tag size = 50 INFO @ Tue, 27 Jun 2017 13:06:49: #1 total tags in treatment: 37424801 INFO @ Tue, 27 Jun 2017 13:06:49: #1 user defined the maximum tags... INFO @ Tue, 27 Jun 2017 13:06:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 27 Jun 2017 13:06:50: #1 tags after filtering in treatment: 31614764 INFO @ Tue, 27 Jun 2017 13:06:50: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 27 Jun 2017 13:06:50: #1 finished! INFO @ Tue, 27 Jun 2017 13:06:50: #2 Build Peak Model... INFO @ Tue, 27 Jun 2017 13:06:50: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 27 Jun 2017 13:06:51: 73000000 INFO @ Tue, 27 Jun 2017 13:06:52: #2 number of paired peaks: 90 WARNING @ Tue, 27 Jun 2017 13:06:52: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 27 Jun 2017 13:06:52: Process for pairing-model is terminated! cat: SRX1995067.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1995067.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 27 Jun 2017 13:06:58: 74000000 INFO @ Tue, 27 Jun 2017 13:07:05: 75000000 INFO @ Tue, 27 Jun 2017 13:07:12: 76000000 INFO @ Tue, 27 Jun 2017 13:07:18: 77000000 INFO @ Tue, 27 Jun 2017 13:07:25: 78000000 INFO @ Tue, 27 Jun 2017 13:07:32: #1 tag size is determined as 50 bps INFO @ Tue, 27 Jun 2017 13:07:32: #1 tag size = 50 INFO @ Tue, 27 Jun 2017 13:07:32: #1 total tags in treatment: 37424801 INFO @ Tue, 27 Jun 2017 13:07:32: #1 user defined the maximum tags... INFO @ Tue, 27 Jun 2017 13:07:32: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 27 Jun 2017 13:07:32: #1 tags after filtering in treatment: 31614764 INFO @ Tue, 27 Jun 2017 13:07:32: #1 Redundant rate of treatment: 0.16 INFO @ Tue, 27 Jun 2017 13:07:32: #1 finished! INFO @ Tue, 27 Jun 2017 13:07:32: #2 Build Peak Model... INFO @ Tue, 27 Jun 2017 13:07:32: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 27 Jun 2017 13:07:34: #2 number of paired peaks: 90 WARNING @ Tue, 27 Jun 2017 13:07:34: Too few paired peaks (90) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 27 Jun 2017 13:07:34: Process for pairing-model is terminated! cat: SRX1995067.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1995067.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1995067.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。