AOE
2019/05/20Web Site: https://aoe.dbcls.jp/en
HTTPS Site: https://dbarchive.biosciencedbc.jp/data/aoe/
AOE is an index of public gene expression database.
README Content
1. Database Component
2. Data Description
2.1 README
| Data name | README |
|---|---|
| Description of data contents | HTML file to describe "AOE" data. |
| File | README_e.html (English) |
2.2 Gene expression data list
| Data name | Gene expression data list |
|---|---|
| Description of data contents | An index of public gene expression database. |
| File | aoe_data_list.zip (9.2 MB) |
Data items are the following:
| Data item | Description |
|---|---|
| PRJID | BioProject ID of the project where data is obtained (Link to BioProjct in simple search) |
| AEID | ArrayExpress ID of data (Link to ArrayExpress in simple search) |
| GSE | GEO SeriesID of data (Link to GEO in simple search) |
| Description | Data description |
| Date | Data submission date |
| ArrayType | ArrayType |
| ArrayGroup | ArrayType group |
| Technology | Experiment technology |
| Instrument | Instrument name or ID of BioProject entry where instument information is described |
| NGSGroup | Instrument group when NGS is used |
| Organisms | Organisms |
| Rep_organism | Representative of Organisms |
3. License
You may use this database in compliance with the terms and conditions of the license described below. The license specifies the license terms regarding the use of this database and the requirements you must follow in using this database.
The license for this database is specified in the Creative Commons Attribution 4.0 International.
If you use data from this database, please be sure attribute this database as follows: "AOE © DBCLS licensed under CC Attribution 4.0 International".
The summary of the Creative Commons Attribution 4.0 International is found here.
With regard to this database, you are licensed to:
- freely access part or whole of this database, and acquire data;
- freely redistribute part or whole of the data from this database; and
- freely create and distribute database and other adapted materials based on part or whole of the data from this database,
under the license, as long as you comply with the following conditions:
- You must attribute this database in the manner specified by the author or licensor when distributing part or whole of this database or any adapted material.
- You need to contact the Licensor shown below to request a license for use of this database or any part thereof not licensed under the license.
https://dbcls.rois.ac.jp/contact-en.html
About Providing Links to This Database
You can freely provide links to all contents in this database. But, contents might be changed without notice.
4. Update History
| Date | Update contents |
|---|---|
| 2019/05/17 | AOE English archive site is opened. |
| 2014/10/01 | AOE (https://aoe.dbcls.jp/en) is opened. |
5. Literature
Hidemasa BonoAll of gene expression (AOE): integrated index for public gene expression databases
bioRxiv https://doi.org/10.1101/626754