Job ID = 11244888 sra ファイルのダウンロード中... Completed: 1235705K bytes transferred in 16 seconds (610227K bits/sec), in 1 file. Completed: 1315916K bytes transferred in 15 seconds (701062K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 27248413 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065334/SRR7145387.sra Written 27248413 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065334/SRR7145387.sra Read 29395570 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065334/SRR7145388.sra Written 29395570 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065334/SRR7145388.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:41:11 56643983 reads; of these: 56643983 (100.00%) were paired; of these: 1922206 (3.39%) aligned concordantly 0 times 46434717 (81.98%) aligned concordantly exactly 1 time 8287060 (14.63%) aligned concordantly >1 times ---- 1922206 pairs aligned concordantly 0 times; of these: 570937 (29.70%) aligned discordantly 1 time ---- 1351269 pairs aligned 0 times concordantly or discordantly; of these: 2702538 mates make up the pairs; of these: 2114268 (78.23%) aligned 0 times 273168 (10.11%) aligned exactly 1 time 315102 (11.66%) aligned >1 times 98.13% overall alignment rate Time searching: 00:41:11 Overall time: 00:41:11 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 48 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 4066007 / 54908902 = 0.0741 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 09 Oct 2018 23:47:17: # Command line: callpeak -t SRX4065334.bam -f BAM -g 12100000 -n SRX4065334.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4065334.05 # format = BAM # ChIP-seq file = ['SRX4065334.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:47:17: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:47:17: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:47:17: # Command line: callpeak -t SRX4065334.bam -f BAM -g 12100000 -n SRX4065334.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4065334.20 # format = BAM # ChIP-seq file = ['SRX4065334.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:47:17: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:47:17: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:47:17: # Command line: callpeak -t SRX4065334.bam -f BAM -g 12100000 -n SRX4065334.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4065334.10 # format = BAM # ChIP-seq file = ['SRX4065334.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:47:17: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:47:17: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:47:22: 1000000 INFO @ Tue, 09 Oct 2018 23:47:23: 1000000 INFO @ Tue, 09 Oct 2018 23:47:23: 1000000 INFO @ Tue, 09 Oct 2018 23:47:28: 2000000 INFO @ Tue, 09 Oct 2018 23:47:28: 2000000 INFO @ Tue, 09 Oct 2018 23:47:28: 2000000 INFO @ Tue, 09 Oct 2018 23:47:33: 3000000 INFO @ Tue, 09 Oct 2018 23:47:33: 3000000 INFO @ Tue, 09 Oct 2018 23:47:33: 3000000 INFO @ Tue, 09 Oct 2018 23:47:39: 4000000 INFO @ Tue, 09 Oct 2018 23:47:39: 4000000 INFO @ Tue, 09 Oct 2018 23:47:39: 4000000 INFO @ Tue, 09 Oct 2018 23:47:44: 5000000 INFO @ Tue, 09 Oct 2018 23:47:44: 5000000 INFO @ Tue, 09 Oct 2018 23:47:44: 5000000 INFO @ Tue, 09 Oct 2018 23:47:49: 6000000 INFO @ Tue, 09 Oct 2018 23:47:50: 6000000 INFO @ Tue, 09 Oct 2018 23:47:50: 6000000 INFO @ Tue, 09 Oct 2018 23:47:55: 7000000 INFO @ Tue, 09 Oct 2018 23:47:55: 7000000 INFO @ Tue, 09 Oct 2018 23:47:55: 7000000 INFO @ Tue, 09 Oct 2018 23:48:00: 8000000 INFO @ Tue, 09 Oct 2018 23:48:00: 8000000 INFO @ Tue, 09 Oct 2018 23:48:00: 8000000 INFO @ Tue, 09 Oct 2018 23:48:05: 9000000 INFO @ Tue, 09 Oct 2018 23:48:06: 9000000 INFO @ Tue, 09 Oct 2018 23:48:06: 9000000 INFO @ Tue, 09 Oct 2018 23:48:11: 10000000 INFO @ Tue, 09 Oct 2018 23:48:11: 10000000 INFO @ Tue, 09 Oct 2018 23:48:11: 10000000 INFO @ Tue, 09 Oct 2018 23:48:16: 11000000 INFO @ Tue, 09 Oct 2018 23:48:17: 11000000 INFO @ Tue, 09 Oct 2018 23:48:17: 11000000 INFO @ Tue, 09 Oct 2018 23:48:22: 12000000 INFO @ Tue, 09 Oct 2018 23:48:22: 12000000 INFO @ Tue, 09 Oct 2018 23:48:22: 12000000 INFO @ Tue, 09 Oct 2018 23:48:27: 13000000 INFO @ Tue, 09 Oct 2018 23:48:27: 13000000 INFO @ Tue, 09 Oct 2018 23:48:28: 13000000 INFO @ Tue, 09 Oct 2018 23:48:32: 14000000 INFO @ Tue, 09 Oct 2018 23:48:33: 14000000 INFO @ Tue, 09 Oct 2018 23:48:33: 14000000 INFO @ Tue, 09 Oct 2018 23:48:37: 15000000 INFO @ Tue, 09 Oct 2018 23:48:38: 15000000 INFO @ Tue, 09 Oct 2018 23:48:38: 15000000 INFO @ Tue, 09 Oct 2018 23:48:43: 16000000 INFO @ Tue, 09 Oct 2018 23:48:43: 16000000 INFO @ Tue, 09 Oct 2018 23:48:44: 16000000 INFO @ Tue, 09 Oct 2018 23:48:48: 17000000 INFO @ Tue, 09 Oct 2018 23:48:49: 17000000 INFO @ Tue, 09 Oct 2018 23:48:49: 17000000 INFO @ Tue, 09 Oct 2018 23:48:53: 18000000 INFO @ Tue, 09 Oct 2018 23:48:54: 18000000 INFO @ Tue, 09 Oct 2018 23:48:54: 18000000 INFO @ Tue, 09 Oct 2018 23:48:58: 19000000 INFO @ Tue, 09 Oct 2018 23:48:59: 19000000 INFO @ Tue, 09 Oct 2018 23:49:00: 19000000 INFO @ Tue, 09 Oct 2018 23:49:04: 20000000 INFO @ Tue, 09 Oct 2018 23:49:05: 20000000 INFO @ Tue, 09 Oct 2018 23:49:05: 20000000 INFO @ Tue, 09 Oct 2018 23:49:09: 21000000 INFO @ Tue, 09 Oct 2018 23:49:10: 21000000 INFO @ Tue, 09 Oct 2018 23:49:10: 21000000 INFO @ Tue, 09 Oct 2018 23:49:14: 22000000 INFO @ Tue, 09 Oct 2018 23:49:15: 22000000 INFO @ Tue, 09 Oct 2018 23:49:16: 22000000 INFO @ Tue, 09 Oct 2018 23:49:19: 23000000 INFO @ Tue, 09 Oct 2018 23:49:21: 23000000 INFO @ Tue, 09 Oct 2018 23:49:21: 23000000 INFO @ Tue, 09 Oct 2018 23:49:25: 24000000 INFO @ Tue, 09 Oct 2018 23:49:26: 24000000 INFO @ Tue, 09 Oct 2018 23:49:26: 24000000 INFO @ Tue, 09 Oct 2018 23:49:30: 25000000 INFO @ Tue, 09 Oct 2018 23:49:31: 25000000 INFO @ Tue, 09 Oct 2018 23:49:32: 25000000 INFO @ Tue, 09 Oct 2018 23:49:35: 26000000 INFO @ Tue, 09 Oct 2018 23:49:37: 26000000 INFO @ Tue, 09 Oct 2018 23:49:37: 26000000 INFO @ Tue, 09 Oct 2018 23:49:40: 27000000 INFO @ Tue, 09 Oct 2018 23:49:42: 27000000 INFO @ Tue, 09 Oct 2018 23:49:42: 27000000 INFO @ Tue, 09 Oct 2018 23:49:45: 28000000 INFO @ Tue, 09 Oct 2018 23:49:47: 28000000 INFO @ Tue, 09 Oct 2018 23:49:48: 28000000 INFO @ Tue, 09 Oct 2018 23:49:51: 29000000 INFO @ Tue, 09 Oct 2018 23:49:53: 29000000 INFO @ Tue, 09 Oct 2018 23:49:53: 29000000 INFO @ Tue, 09 Oct 2018 23:49:56: 30000000 INFO @ Tue, 09 Oct 2018 23:49:58: 30000000 INFO @ Tue, 09 Oct 2018 23:49:59: 30000000 INFO @ Tue, 09 Oct 2018 23:50:02: 31000000 INFO @ Tue, 09 Oct 2018 23:50:04: 31000000 INFO @ Tue, 09 Oct 2018 23:50:04: 31000000 INFO @ Tue, 09 Oct 2018 23:50:07: 32000000 INFO @ Tue, 09 Oct 2018 23:50:09: 32000000 INFO @ Tue, 09 Oct 2018 23:50:10: 32000000 INFO @ Tue, 09 Oct 2018 23:50:12: 33000000 INFO @ Tue, 09 Oct 2018 23:50:14: 33000000 INFO @ Tue, 09 Oct 2018 23:50:15: 33000000 INFO @ Tue, 09 Oct 2018 23:50:17: 34000000 INFO @ Tue, 09 Oct 2018 23:50:20: 34000000 INFO @ Tue, 09 Oct 2018 23:50:20: 34000000 INFO @ Tue, 09 Oct 2018 23:50:22: 35000000 INFO @ Tue, 09 Oct 2018 23:50:25: 35000000 INFO @ Tue, 09 Oct 2018 23:50:26: 35000000 INFO @ Tue, 09 Oct 2018 23:50:28: 36000000 INFO @ Tue, 09 Oct 2018 23:50:30: 36000000 INFO @ Tue, 09 Oct 2018 23:50:31: 36000000 INFO @ Tue, 09 Oct 2018 23:50:33: 37000000 INFO @ Tue, 09 Oct 2018 23:50:36: 37000000 INFO @ Tue, 09 Oct 2018 23:50:36: 37000000 INFO @ Tue, 09 Oct 2018 23:50:38: 38000000 INFO @ Tue, 09 Oct 2018 23:50:41: 38000000 INFO @ Tue, 09 Oct 2018 23:50:42: 38000000 INFO @ Tue, 09 Oct 2018 23:50:43: 39000000 INFO @ Tue, 09 Oct 2018 23:50:47: 39000000 INFO @ Tue, 09 Oct 2018 23:50:47: 39000000 INFO @ Tue, 09 Oct 2018 23:50:48: 40000000 INFO @ Tue, 09 Oct 2018 23:50:52: 40000000 INFO @ Tue, 09 Oct 2018 23:50:53: 40000000 INFO @ Tue, 09 Oct 2018 23:50:54: 41000000 INFO @ Tue, 09 Oct 2018 23:50:57: 41000000 INFO @ Tue, 09 Oct 2018 23:50:58: 41000000 INFO @ Tue, 09 Oct 2018 23:50:59: 42000000 INFO @ Tue, 09 Oct 2018 23:51:03: 42000000 INFO @ Tue, 09 Oct 2018 23:51:03: 42000000 INFO @ Tue, 09 Oct 2018 23:51:04: 43000000 INFO @ Tue, 09 Oct 2018 23:51:08: 43000000 INFO @ Tue, 09 Oct 2018 23:51:09: 43000000 INFO @ Tue, 09 Oct 2018 23:51:09: 44000000 INFO @ Tue, 09 Oct 2018 23:51:14: 44000000 INFO @ Tue, 09 Oct 2018 23:51:14: 44000000 INFO @ Tue, 09 Oct 2018 23:51:14: 45000000 INFO @ Tue, 09 Oct 2018 23:51:19: 45000000 INFO @ Tue, 09 Oct 2018 23:51:20: 46000000 INFO @ Tue, 09 Oct 2018 23:51:20: 45000000 INFO @ Tue, 09 Oct 2018 23:51:24: 46000000 INFO @ Tue, 09 Oct 2018 23:51:25: 47000000 INFO @ Tue, 09 Oct 2018 23:51:25: 46000000 INFO @ Tue, 09 Oct 2018 23:51:30: 47000000 INFO @ Tue, 09 Oct 2018 23:51:30: 48000000 INFO @ Tue, 09 Oct 2018 23:51:31: 47000000 INFO @ Tue, 09 Oct 2018 23:51:35: 48000000 INFO @ Tue, 09 Oct 2018 23:51:35: 49000000 INFO @ Tue, 09 Oct 2018 23:51:36: 48000000 INFO @ Tue, 09 Oct 2018 23:51:41: 50000000 INFO @ Tue, 09 Oct 2018 23:51:41: 49000000 INFO @ Tue, 09 Oct 2018 23:51:42: 49000000 INFO @ Tue, 09 Oct 2018 23:51:46: 51000000 INFO @ Tue, 09 Oct 2018 23:51:46: 50000000 INFO @ Tue, 09 Oct 2018 23:51:47: 50000000 INFO @ Tue, 09 Oct 2018 23:51:51: 52000000 INFO @ Tue, 09 Oct 2018 23:51:52: 51000000 INFO @ Tue, 09 Oct 2018 23:51:52: 51000000 INFO @ Tue, 09 Oct 2018 23:51:56: 53000000 INFO @ Tue, 09 Oct 2018 23:51:57: 52000000 INFO @ Tue, 09 Oct 2018 23:51:58: 52000000 INFO @ Tue, 09 Oct 2018 23:52:01: 54000000 INFO @ Tue, 09 Oct 2018 23:52:02: 53000000 INFO @ Tue, 09 Oct 2018 23:52:03: 53000000 INFO @ Tue, 09 Oct 2018 23:52:07: 55000000 INFO @ Tue, 09 Oct 2018 23:52:08: 54000000 INFO @ Tue, 09 Oct 2018 23:52:09: 54000000 INFO @ Tue, 09 Oct 2018 23:52:12: 56000000 INFO @ Tue, 09 Oct 2018 23:52:13: 55000000 INFO @ Tue, 09 Oct 2018 23:52:14: 55000000 INFO @ Tue, 09 Oct 2018 23:52:17: 57000000 INFO @ Tue, 09 Oct 2018 23:52:19: 56000000 INFO @ Tue, 09 Oct 2018 23:52:20: 56000000 INFO @ Tue, 09 Oct 2018 23:52:22: 58000000 INFO @ Tue, 09 Oct 2018 23:52:24: 57000000 INFO @ Tue, 09 Oct 2018 23:52:25: 57000000 INFO @ Tue, 09 Oct 2018 23:52:28: 59000000 INFO @ Tue, 09 Oct 2018 23:52:29: 58000000 INFO @ Tue, 09 Oct 2018 23:52:30: 58000000 INFO @ Tue, 09 Oct 2018 23:52:33: 60000000 INFO @ Tue, 09 Oct 2018 23:52:35: 59000000 INFO @ Tue, 09 Oct 2018 23:52:36: 59000000 INFO @ Tue, 09 Oct 2018 23:52:38: 61000000 INFO @ Tue, 09 Oct 2018 23:52:40: 60000000 INFO @ Tue, 09 Oct 2018 23:52:41: 60000000 INFO @ Tue, 09 Oct 2018 23:52:43: 62000000 INFO @ Tue, 09 Oct 2018 23:52:46: 61000000 INFO @ Tue, 09 Oct 2018 23:52:47: 61000000 INFO @ Tue, 09 Oct 2018 23:52:48: 63000000 INFO @ Tue, 09 Oct 2018 23:52:51: 62000000 INFO @ Tue, 09 Oct 2018 23:52:52: 62000000 INFO @ Tue, 09 Oct 2018 23:52:53: 64000000 INFO @ Tue, 09 Oct 2018 23:52:56: 63000000 INFO @ Tue, 09 Oct 2018 23:52:57: 63000000 INFO @ Tue, 09 Oct 2018 23:52:59: 65000000 INFO @ Tue, 09 Oct 2018 23:53:02: 64000000 INFO @ Tue, 09 Oct 2018 23:53:03: 64000000 INFO @ Tue, 09 Oct 2018 23:53:04: 66000000 INFO @ Tue, 09 Oct 2018 23:53:07: 65000000 INFO @ Tue, 09 Oct 2018 23:53:08: 65000000 INFO @ Tue, 09 Oct 2018 23:53:09: 67000000 INFO @ Tue, 09 Oct 2018 23:53:13: 66000000 INFO @ Tue, 09 Oct 2018 23:53:14: 66000000 INFO @ Tue, 09 Oct 2018 23:53:14: 68000000 INFO @ Tue, 09 Oct 2018 23:53:18: 67000000 INFO @ Tue, 09 Oct 2018 23:53:19: 67000000 INFO @ Tue, 09 Oct 2018 23:53:19: 69000000 INFO @ Tue, 09 Oct 2018 23:53:23: 68000000 INFO @ Tue, 09 Oct 2018 23:53:24: 68000000 INFO @ Tue, 09 Oct 2018 23:53:25: 70000000 INFO @ Tue, 09 Oct 2018 23:53:29: 69000000 INFO @ Tue, 09 Oct 2018 23:53:30: 71000000 INFO @ Tue, 09 Oct 2018 23:53:30: 69000000 INFO @ Tue, 09 Oct 2018 23:53:34: 70000000 INFO @ Tue, 09 Oct 2018 23:53:35: 72000000 INFO @ Tue, 09 Oct 2018 23:53:35: 70000000 INFO @ Tue, 09 Oct 2018 23:53:39: 71000000 INFO @ Tue, 09 Oct 2018 23:53:40: 73000000 INFO @ Tue, 09 Oct 2018 23:53:41: 71000000 INFO @ Tue, 09 Oct 2018 23:53:45: 72000000 INFO @ Tue, 09 Oct 2018 23:53:45: 74000000 INFO @ Tue, 09 Oct 2018 23:53:46: 72000000 INFO @ Tue, 09 Oct 2018 23:53:50: 73000000 INFO @ Tue, 09 Oct 2018 23:53:51: 75000000 INFO @ Tue, 09 Oct 2018 23:53:52: 73000000 INFO @ Tue, 09 Oct 2018 23:53:56: 74000000 INFO @ Tue, 09 Oct 2018 23:53:56: 76000000 INFO @ Tue, 09 Oct 2018 23:53:57: 74000000 INFO @ Tue, 09 Oct 2018 23:54:01: 75000000 INFO @ Tue, 09 Oct 2018 23:54:01: 77000000 INFO @ Tue, 09 Oct 2018 23:54:02: 75000000 INFO @ Tue, 09 Oct 2018 23:54:06: 78000000 INFO @ Tue, 09 Oct 2018 23:54:06: 76000000 INFO @ Tue, 09 Oct 2018 23:54:08: 76000000 INFO @ Tue, 09 Oct 2018 23:54:11: 79000000 INFO @ Tue, 09 Oct 2018 23:54:12: 77000000 INFO @ Tue, 09 Oct 2018 23:54:13: 77000000 INFO @ Tue, 09 Oct 2018 23:54:17: 80000000 INFO @ Tue, 09 Oct 2018 23:54:17: 78000000 INFO @ Tue, 09 Oct 2018 23:54:19: 78000000 INFO @ Tue, 09 Oct 2018 23:54:22: 81000000 INFO @ Tue, 09 Oct 2018 23:54:23: 79000000 INFO @ Tue, 09 Oct 2018 23:54:24: 79000000 INFO @ Tue, 09 Oct 2018 23:54:27: 82000000 INFO @ Tue, 09 Oct 2018 23:54:28: 80000000 INFO @ Tue, 09 Oct 2018 23:54:29: 80000000 INFO @ Tue, 09 Oct 2018 23:54:32: 83000000 INFO @ Tue, 09 Oct 2018 23:54:33: 81000000 INFO @ Tue, 09 Oct 2018 23:54:35: 81000000 INFO @ Tue, 09 Oct 2018 23:54:37: 84000000 INFO @ Tue, 09 Oct 2018 23:54:39: 82000000 INFO @ Tue, 09 Oct 2018 23:54:40: 82000000 INFO @ Tue, 09 Oct 2018 23:54:43: 85000000 INFO @ Tue, 09 Oct 2018 23:54:44: 83000000 INFO @ Tue, 09 Oct 2018 23:54:46: 83000000 INFO @ Tue, 09 Oct 2018 23:54:48: 86000000 INFO @ Tue, 09 Oct 2018 23:54:50: 84000000 INFO @ Tue, 09 Oct 2018 23:54:51: 84000000 INFO @ Tue, 09 Oct 2018 23:54:53: 87000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 09 Oct 2018 23:54:55: 85000000 INFO @ Tue, 09 Oct 2018 23:54:57: 85000000 INFO @ Tue, 09 Oct 2018 23:54:58: 88000000 INFO @ Tue, 09 Oct 2018 23:55:00: 86000000 INFO @ Tue, 09 Oct 2018 23:55:02: 86000000 INFO @ Tue, 09 Oct 2018 23:55:04: 89000000 INFO @ Tue, 09 Oct 2018 23:55:06: 87000000 INFO @ Tue, 09 Oct 2018 23:55:07: 87000000 INFO @ Tue, 09 Oct 2018 23:55:09: 90000000 INFO @ Tue, 09 Oct 2018 23:55:11: 88000000 INFO @ Tue, 09 Oct 2018 23:55:13: 88000000 INFO @ Tue, 09 Oct 2018 23:55:14: 91000000 INFO @ Tue, 09 Oct 2018 23:55:17: 89000000 BigWig に変換しました。 INFO @ Tue, 09 Oct 2018 23:55:18: 89000000 INFO @ Tue, 09 Oct 2018 23:55:19: 92000000 INFO @ Tue, 09 Oct 2018 23:55:22: 90000000 INFO @ Tue, 09 Oct 2018 23:55:24: 90000000 INFO @ Tue, 09 Oct 2018 23:55:24: 93000000 INFO @ Tue, 09 Oct 2018 23:55:28: 91000000 INFO @ Tue, 09 Oct 2018 23:55:29: 91000000 INFO @ Tue, 09 Oct 2018 23:55:30: 94000000 INFO @ Tue, 09 Oct 2018 23:55:33: 92000000 INFO @ Tue, 09 Oct 2018 23:55:35: 95000000 INFO @ Tue, 09 Oct 2018 23:55:35: 92000000 INFO @ Tue, 09 Oct 2018 23:55:39: 93000000 INFO @ Tue, 09 Oct 2018 23:55:40: 96000000 INFO @ Tue, 09 Oct 2018 23:55:40: 93000000 INFO @ Tue, 09 Oct 2018 23:55:44: 94000000 INFO @ Tue, 09 Oct 2018 23:55:45: 97000000 INFO @ Tue, 09 Oct 2018 23:55:46: 94000000 INFO @ Tue, 09 Oct 2018 23:55:50: 95000000 INFO @ Tue, 09 Oct 2018 23:55:50: 98000000 INFO @ Tue, 09 Oct 2018 23:55:51: 95000000 INFO @ Tue, 09 Oct 2018 23:55:55: 96000000 INFO @ Tue, 09 Oct 2018 23:55:56: 99000000 INFO @ Tue, 09 Oct 2018 23:55:57: 96000000 INFO @ Tue, 09 Oct 2018 23:56:01: 97000000 INFO @ Tue, 09 Oct 2018 23:56:01: 100000000 INFO @ Tue, 09 Oct 2018 23:56:02: 97000000 INFO @ Tue, 09 Oct 2018 23:56:06: 98000000 INFO @ Tue, 09 Oct 2018 23:56:06: 101000000 INFO @ Tue, 09 Oct 2018 23:56:08: 98000000 INFO @ Tue, 09 Oct 2018 23:56:11: 102000000 INFO @ Tue, 09 Oct 2018 23:56:11: 99000000 INFO @ Tue, 09 Oct 2018 23:56:13: 99000000 INFO @ Tue, 09 Oct 2018 23:56:16: 103000000 INFO @ Tue, 09 Oct 2018 23:56:17: 100000000 INFO @ Tue, 09 Oct 2018 23:56:17: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:56:17: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:56:17: #1 total tags in treatment: 50658183 INFO @ Tue, 09 Oct 2018 23:56:17: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:56:17: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:56:19: #1 tags after filtering in treatment: 19114984 INFO @ Tue, 09 Oct 2018 23:56:19: #1 Redundant rate of treatment: 0.62 INFO @ Tue, 09 Oct 2018 23:56:19: #1 finished! INFO @ Tue, 09 Oct 2018 23:56:19: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:56:19: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:56:19: 100000000 INFO @ Tue, 09 Oct 2018 23:56:20: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:56:20: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:56:20: Process for pairing-model is terminated! cat: SRX4065334.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065334.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 09 Oct 2018 23:56:22: 101000000 INFO @ Tue, 09 Oct 2018 23:56:24: 101000000 INFO @ Tue, 09 Oct 2018 23:56:28: 102000000 INFO @ Tue, 09 Oct 2018 23:56:30: 102000000 INFO @ Tue, 09 Oct 2018 23:56:33: 103000000 INFO @ Tue, 09 Oct 2018 23:56:34: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:56:34: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:56:34: #1 total tags in treatment: 50658183 INFO @ Tue, 09 Oct 2018 23:56:34: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:56:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:56:35: 103000000 INFO @ Tue, 09 Oct 2018 23:56:36: #1 tags after filtering in treatment: 19114984 INFO @ Tue, 09 Oct 2018 23:56:36: #1 Redundant rate of treatment: 0.62 INFO @ Tue, 09 Oct 2018 23:56:36: #1 finished! INFO @ Tue, 09 Oct 2018 23:56:36: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:56:36: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:56:36: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:56:36: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:56:36: #1 total tags in treatment: 50658183 INFO @ Tue, 09 Oct 2018 23:56:36: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:56:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:56:37: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:56:37: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:56:37: Process for pairing-model is terminated! cat: SRX4065334.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065334.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 09 Oct 2018 23:56:37: #1 tags after filtering in treatment: 19114984 INFO @ Tue, 09 Oct 2018 23:56:37: #1 Redundant rate of treatment: 0.62 INFO @ Tue, 09 Oct 2018 23:56:37: #1 finished! INFO @ Tue, 09 Oct 2018 23:56:37: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:56:37: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:56:39: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:56:39: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:56:39: Process for pairing-model is terminated! cat: SRX4065334.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065334.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065334.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling