Job ID = 2009801 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-07-05T11:23:17 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:23:17 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 70,811,233 reads read : 141,622,466 reads written : 141,622,466 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:46:26 70811233 reads; of these: 70811233 (100.00%) were paired; of these: 26827952 (37.89%) aligned concordantly 0 times 33897958 (47.87%) aligned concordantly exactly 1 time 10085323 (14.24%) aligned concordantly >1 times ---- 26827952 pairs aligned concordantly 0 times; of these: 8891839 (33.14%) aligned discordantly 1 time ---- 17936113 pairs aligned 0 times concordantly or discordantly; of these: 35872226 mates make up the pairs; of these: 22116515 (61.65%) aligned 0 times 7990075 (22.27%) aligned exactly 1 time 5765636 (16.07%) aligned >1 times 84.38% overall alignment rate Time searching: 00:46:27 Overall time: 00:46:27 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 32 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 21360381 / 52813012 = 0.4045 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 21:48:28: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:48:28: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:48:28: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:48:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:48:29: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:48:29: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:48:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:48:30: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:48:30: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:48:34: 1000000 INFO @ Fri, 05 Jul 2019 21:48:35: 1000000 INFO @ Fri, 05 Jul 2019 21:48:36: 1000000 INFO @ Fri, 05 Jul 2019 21:48:40: 2000000 INFO @ Fri, 05 Jul 2019 21:48:40: 2000000 INFO @ Fri, 05 Jul 2019 21:48:42: 2000000 INFO @ Fri, 05 Jul 2019 21:48:46: 3000000 INFO @ Fri, 05 Jul 2019 21:48:46: 3000000 INFO @ Fri, 05 Jul 2019 21:48:48: 3000000 INFO @ Fri, 05 Jul 2019 21:48:51: 4000000 INFO @ Fri, 05 Jul 2019 21:48:52: 4000000 INFO @ Fri, 05 Jul 2019 21:48:54: 4000000 INFO @ Fri, 05 Jul 2019 21:48:56: 5000000 INFO @ Fri, 05 Jul 2019 21:48:58: 5000000 INFO @ Fri, 05 Jul 2019 21:49:00: 5000000 INFO @ Fri, 05 Jul 2019 21:49:02: 6000000 INFO @ Fri, 05 Jul 2019 21:49:04: 6000000 INFO @ Fri, 05 Jul 2019 21:49:05: 6000000 INFO @ Fri, 05 Jul 2019 21:49:07: 7000000 INFO @ Fri, 05 Jul 2019 21:49:10: 7000000 INFO @ Fri, 05 Jul 2019 21:49:11: 7000000 INFO @ Fri, 05 Jul 2019 21:49:12: 8000000 INFO @ Fri, 05 Jul 2019 21:49:16: 8000000 INFO @ Fri, 05 Jul 2019 21:49:17: 9000000 INFO @ Fri, 05 Jul 2019 21:49:17: 8000000 INFO @ Fri, 05 Jul 2019 21:49:22: 9000000 INFO @ Fri, 05 Jul 2019 21:49:23: 10000000 INFO @ Fri, 05 Jul 2019 21:49:24: 9000000 INFO @ Fri, 05 Jul 2019 21:49:28: 11000000 INFO @ Fri, 05 Jul 2019 21:49:28: 10000000 INFO @ Fri, 05 Jul 2019 21:49:30: 10000000 INFO @ Fri, 05 Jul 2019 21:49:33: 12000000 INFO @ Fri, 05 Jul 2019 21:49:34: 11000000 INFO @ Fri, 05 Jul 2019 21:49:36: 11000000 INFO @ Fri, 05 Jul 2019 21:49:38: 13000000 INFO @ Fri, 05 Jul 2019 21:49:40: 12000000 INFO @ Fri, 05 Jul 2019 21:49:41: 12000000 INFO @ Fri, 05 Jul 2019 21:49:44: 14000000 INFO @ Fri, 05 Jul 2019 21:49:45: 13000000 INFO @ Fri, 05 Jul 2019 21:49:47: 13000000 INFO @ Fri, 05 Jul 2019 21:49:49: 15000000 INFO @ Fri, 05 Jul 2019 21:49:51: 14000000 INFO @ Fri, 05 Jul 2019 21:49:52: 14000000 INFO @ Fri, 05 Jul 2019 21:49:54: 16000000 INFO @ Fri, 05 Jul 2019 21:49:56: 15000000 INFO @ Fri, 05 Jul 2019 21:49:58: 15000000 INFO @ Fri, 05 Jul 2019 21:49:59: 17000000 INFO @ Fri, 05 Jul 2019 21:50:02: 16000000 INFO @ Fri, 05 Jul 2019 21:50:04: 16000000 INFO @ Fri, 05 Jul 2019 21:50:04: 18000000 INFO @ Fri, 05 Jul 2019 21:50:07: 17000000 INFO @ Fri, 05 Jul 2019 21:50:09: 19000000 INFO @ Fri, 05 Jul 2019 21:50:09: 17000000 INFO @ Fri, 05 Jul 2019 21:50:13: 18000000 INFO @ Fri, 05 Jul 2019 21:50:14: 20000000 INFO @ Fri, 05 Jul 2019 21:50:15: 18000000 INFO @ Fri, 05 Jul 2019 21:50:18: 19000000 INFO @ Fri, 05 Jul 2019 21:50:19: 21000000 INFO @ Fri, 05 Jul 2019 21:50:20: 19000000 INFO @ Fri, 05 Jul 2019 21:50:24: 20000000 INFO @ Fri, 05 Jul 2019 21:50:24: 22000000 INFO @ Fri, 05 Jul 2019 21:50:25: 20000000 INFO @ Fri, 05 Jul 2019 21:50:29: 23000000 INFO @ Fri, 05 Jul 2019 21:50:29: 21000000 INFO @ Fri, 05 Jul 2019 21:50:31: 21000000 INFO @ Fri, 05 Jul 2019 21:50:34: 24000000 INFO @ Fri, 05 Jul 2019 21:50:35: 22000000 INFO @ Fri, 05 Jul 2019 21:50:36: 22000000 INFO @ Fri, 05 Jul 2019 21:50:40: 25000000 INFO @ Fri, 05 Jul 2019 21:50:40: 23000000 INFO @ Fri, 05 Jul 2019 21:50:42: 23000000 INFO @ Fri, 05 Jul 2019 21:50:45: 26000000 INFO @ Fri, 05 Jul 2019 21:50:46: 24000000 INFO @ Fri, 05 Jul 2019 21:50:47: 24000000 INFO @ Fri, 05 Jul 2019 21:50:50: 27000000 INFO @ Fri, 05 Jul 2019 21:50:51: 25000000 INFO @ Fri, 05 Jul 2019 21:50:53: 25000000 INFO @ Fri, 05 Jul 2019 21:50:56: 28000000 INFO @ Fri, 05 Jul 2019 21:50:57: 26000000 INFO @ Fri, 05 Jul 2019 21:50:58: 26000000 INFO @ Fri, 05 Jul 2019 21:51:01: 29000000 INFO @ Fri, 05 Jul 2019 21:51:02: 27000000 INFO @ Fri, 05 Jul 2019 21:51:04: 27000000 INFO @ Fri, 05 Jul 2019 21:51:06: 30000000 INFO @ Fri, 05 Jul 2019 21:51:08: 28000000 INFO @ Fri, 05 Jul 2019 21:51:09: 28000000 INFO @ Fri, 05 Jul 2019 21:51:12: 31000000 INFO @ Fri, 05 Jul 2019 21:51:13: 29000000 INFO @ Fri, 05 Jul 2019 21:51:15: 29000000 INFO @ Fri, 05 Jul 2019 21:51:17: 32000000 INFO @ Fri, 05 Jul 2019 21:51:19: 30000000 INFO @ Fri, 05 Jul 2019 21:51:20: 30000000 INFO @ Fri, 05 Jul 2019 21:51:22: 33000000 INFO @ Fri, 05 Jul 2019 21:51:25: 31000000 INFO @ Fri, 05 Jul 2019 21:51:26: 31000000 INFO @ Fri, 05 Jul 2019 21:51:27: 34000000 INFO @ Fri, 05 Jul 2019 21:51:30: 32000000 INFO @ Fri, 05 Jul 2019 21:51:31: 32000000 INFO @ Fri, 05 Jul 2019 21:51:32: 35000000 INFO @ Fri, 05 Jul 2019 21:51:36: 33000000 INFO @ Fri, 05 Jul 2019 21:51:37: 33000000 INFO @ Fri, 05 Jul 2019 21:51:37: 36000000 INFO @ Fri, 05 Jul 2019 21:51:41: 34000000 INFO @ Fri, 05 Jul 2019 21:51:42: 37000000 INFO @ Fri, 05 Jul 2019 21:51:42: 34000000 INFO @ Fri, 05 Jul 2019 21:51:47: 35000000 INFO @ Fri, 05 Jul 2019 21:51:47: 38000000 INFO @ Fri, 05 Jul 2019 21:51:48: 35000000 INFO @ Fri, 05 Jul 2019 21:51:52: 39000000 INFO @ Fri, 05 Jul 2019 21:51:52: 36000000 INFO @ Fri, 05 Jul 2019 21:51:53: 36000000 INFO @ Fri, 05 Jul 2019 21:51:57: 40000000 INFO @ Fri, 05 Jul 2019 21:51:58: 37000000 INFO @ Fri, 05 Jul 2019 21:51:59: 37000000 INFO @ Fri, 05 Jul 2019 21:52:02: 41000000 INFO @ Fri, 05 Jul 2019 21:52:03: 38000000 INFO @ Fri, 05 Jul 2019 21:52:04: 38000000 INFO @ Fri, 05 Jul 2019 21:52:07: 42000000 INFO @ Fri, 05 Jul 2019 21:52:09: 39000000 INFO @ Fri, 05 Jul 2019 21:52:10: 39000000 INFO @ Fri, 05 Jul 2019 21:52:12: 43000000 INFO @ Fri, 05 Jul 2019 21:52:15: 40000000 INFO @ Fri, 05 Jul 2019 21:52:15: 40000000 INFO @ Fri, 05 Jul 2019 21:52:17: 44000000 INFO @ Fri, 05 Jul 2019 21:52:21: 41000000 INFO @ Fri, 05 Jul 2019 21:52:21: 41000000 INFO @ Fri, 05 Jul 2019 21:52:22: 45000000 INFO @ Fri, 05 Jul 2019 21:52:26: 42000000 INFO @ Fri, 05 Jul 2019 21:52:27: 46000000 INFO @ Fri, 05 Jul 2019 21:52:27: 42000000 INFO @ Fri, 05 Jul 2019 21:52:32: 47000000 INFO @ Fri, 05 Jul 2019 21:52:33: 43000000 INFO @ Fri, 05 Jul 2019 21:52:33: 43000000 INFO @ Fri, 05 Jul 2019 21:52:36: 48000000 INFO @ Fri, 05 Jul 2019 21:52:38: 44000000 INFO @ Fri, 05 Jul 2019 21:52:38: 44000000 INFO @ Fri, 05 Jul 2019 21:52:41: 49000000 INFO @ Fri, 05 Jul 2019 21:52:44: 45000000 INFO @ Fri, 05 Jul 2019 21:52:44: 45000000 INFO @ Fri, 05 Jul 2019 21:52:46: 50000000 INFO @ Fri, 05 Jul 2019 21:52:50: 46000000 INFO @ Fri, 05 Jul 2019 21:52:50: 46000000 INFO @ Fri, 05 Jul 2019 21:52:51: 51000000 INFO @ Fri, 05 Jul 2019 21:52:55: 47000000 INFO @ Fri, 05 Jul 2019 21:52:55: 47000000 INFO @ Fri, 05 Jul 2019 21:52:56: 52000000 INFO @ Fri, 05 Jul 2019 21:53:01: 48000000 INFO @ Fri, 05 Jul 2019 21:53:01: 53000000 INFO @ Fri, 05 Jul 2019 21:53:01: 48000000 INFO @ Fri, 05 Jul 2019 21:53:07: 49000000 INFO @ Fri, 05 Jul 2019 21:53:07: 54000000 INFO @ Fri, 05 Jul 2019 21:53:07: 49000000 INFO @ Fri, 05 Jul 2019 21:53:12: 50000000 INFO @ Fri, 05 Jul 2019 21:53:12: 55000000 INFO @ Fri, 05 Jul 2019 21:53:13: 50000000 INFO @ Fri, 05 Jul 2019 21:53:18: 56000000 INFO @ Fri, 05 Jul 2019 21:53:18: 51000000 INFO @ Fri, 05 Jul 2019 21:53:19: 51000000 INFO @ Fri, 05 Jul 2019 21:53:23: 57000000 INFO @ Fri, 05 Jul 2019 21:53:24: 52000000 INFO @ Fri, 05 Jul 2019 21:53:25: 52000000 INFO @ Fri, 05 Jul 2019 21:53:29: 58000000 INFO @ Fri, 05 Jul 2019 21:53:30: 53000000 INFO @ Fri, 05 Jul 2019 21:53:30: 53000000 INFO @ Fri, 05 Jul 2019 21:53:34: 59000000 INFO @ Fri, 05 Jul 2019 21:53:35: 54000000 INFO @ Fri, 05 Jul 2019 21:53:36: 54000000 INFO @ Fri, 05 Jul 2019 21:53:39: 60000000 INFO @ Fri, 05 Jul 2019 21:53:41: 55000000 INFO @ Fri, 05 Jul 2019 21:53:43: 55000000 INFO @ Fri, 05 Jul 2019 21:53:45: 61000000 INFO @ Fri, 05 Jul 2019 21:53:47: 56000000 INFO @ Fri, 05 Jul 2019 21:53:49: 56000000 INFO @ Fri, 05 Jul 2019 21:53:50: 62000000 INFO @ Fri, 05 Jul 2019 21:53:53: 57000000 INFO @ Fri, 05 Jul 2019 21:53:55: 57000000 INFO @ Fri, 05 Jul 2019 21:53:56: 63000000 INFO @ Fri, 05 Jul 2019 21:53:59: 58000000 INFO @ Fri, 05 Jul 2019 21:54:01: 58000000 INFO @ Fri, 05 Jul 2019 21:54:01: 64000000 INFO @ Fri, 05 Jul 2019 21:54:05: 59000000 INFO @ Fri, 05 Jul 2019 21:54:06: 59000000 INFO @ Fri, 05 Jul 2019 21:54:07: 65000000 INFO @ Fri, 05 Jul 2019 21:54:11: 60000000 INFO @ Fri, 05 Jul 2019 21:54:12: 66000000 BedGraph に変換しました。 INFO @ Fri, 05 Jul 2019 21:54:12: 60000000 BigWig に変換中... INFO @ Fri, 05 Jul 2019 21:54:17: 61000000 INFO @ Fri, 05 Jul 2019 21:54:18: 67000000 INFO @ Fri, 05 Jul 2019 21:54:19: 61000000 INFO @ Fri, 05 Jul 2019 21:54:23: 62000000 INFO @ Fri, 05 Jul 2019 21:54:24: 68000000 INFO @ Fri, 05 Jul 2019 21:54:25: 62000000 INFO @ Fri, 05 Jul 2019 21:54:29: 69000000 INFO @ Fri, 05 Jul 2019 21:54:29: 63000000 INFO @ Fri, 05 Jul 2019 21:54:31: 63000000 INFO @ Fri, 05 Jul 2019 21:54:35: 70000000 INFO @ Fri, 05 Jul 2019 21:54:36: 64000000 INFO @ Fri, 05 Jul 2019 21:54:37: 64000000 BigWig に変換しました。 INFO @ Fri, 05 Jul 2019 21:54:40: 71000000 INFO @ Fri, 05 Jul 2019 21:54:42: 65000000 INFO @ Fri, 05 Jul 2019 21:54:43: 65000000 INFO @ Fri, 05 Jul 2019 21:54:46: 72000000 INFO @ Fri, 05 Jul 2019 21:54:48: 66000000 INFO @ Fri, 05 Jul 2019 21:54:50: 66000000 INFO @ Fri, 05 Jul 2019 21:54:51: 73000000 INFO @ Fri, 05 Jul 2019 21:54:54: 67000000 INFO @ Fri, 05 Jul 2019 21:54:56: 67000000 INFO @ Fri, 05 Jul 2019 21:54:57: 74000000 INFO @ Fri, 05 Jul 2019 21:55:00: 68000000 INFO @ Fri, 05 Jul 2019 21:55:02: 68000000 INFO @ Fri, 05 Jul 2019 21:55:03: 75000000 INFO @ Fri, 05 Jul 2019 21:55:07: 69000000 INFO @ Fri, 05 Jul 2019 21:55:08: 76000000 INFO @ Fri, 05 Jul 2019 21:55:08: 69000000 INFO @ Fri, 05 Jul 2019 21:55:13: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 21:55:13: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 21:55:13: #1 total tags in treatment: 24790094 INFO @ Fri, 05 Jul 2019 21:55:13: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 21:55:13: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 21:55:13: 70000000 INFO @ Fri, 05 Jul 2019 21:55:13: #1 tags after filtering in treatment: 10185407 INFO @ Fri, 05 Jul 2019 21:55:13: #1 Redundant rate of treatment: 0.59 INFO @ Fri, 05 Jul 2019 21:55:13: #1 finished! INFO @ Fri, 05 Jul 2019 21:55:13: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 21:55:13: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 21:55:14: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 21:55:14: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 21:55:14: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 21:55:15: 70000000 INFO @ Fri, 05 Jul 2019 21:55:20: 71000000 INFO @ Fri, 05 Jul 2019 21:55:21: 71000000 INFO @ Fri, 05 Jul 2019 21:55:26: 72000000 INFO @ Fri, 05 Jul 2019 21:55:27: 72000000 INFO @ Fri, 05 Jul 2019 21:55:32: 73000000 INFO @ Fri, 05 Jul 2019 21:55:33: 73000000 INFO @ Fri, 05 Jul 2019 21:55:38: 74000000 INFO @ Fri, 05 Jul 2019 21:55:40: 74000000 INFO @ Fri, 05 Jul 2019 21:55:44: 75000000 INFO @ Fri, 05 Jul 2019 21:55:46: 75000000 INFO @ Fri, 05 Jul 2019 21:55:50: 76000000 INFO @ Fri, 05 Jul 2019 21:55:52: 76000000 INFO @ Fri, 05 Jul 2019 21:55:55: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 21:55:55: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 21:55:55: #1 total tags in treatment: 24790094 INFO @ Fri, 05 Jul 2019 21:55:55: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 21:55:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 21:55:56: #1 tags after filtering in treatment: 10185407 INFO @ Fri, 05 Jul 2019 21:55:56: #1 Redundant rate of treatment: 0.59 INFO @ Fri, 05 Jul 2019 21:55:56: #1 finished! INFO @ Fri, 05 Jul 2019 21:55:56: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 21:55:56: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 21:55:57: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 21:55:57: #2 number of paired peaks: 0 INFO @ Fri, 05 Jul 2019 21:55:58: #1 tag size = 25 WARNING @ Fri, 05 Jul 2019 21:55:58: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. INFO @ Fri, 05 Jul 2019 21:55:58: #1 total tags in treatment: 24790094 WARNING @ Fri, 05 Jul 2019 21:55:58: Process for pairing-model is terminated! INFO @ Fri, 05 Jul 2019 21:55:58: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 21:55:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) cut: /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 21:55:58: #1 tags after filtering in treatment: 10185407 INFO @ Fri, 05 Jul 2019 21:55:58: #1 Redundant rate of treatment: 0.59 INFO @ Fri, 05 Jul 2019 21:55:58: #1 finished! INFO @ Fri, 05 Jul 2019 21:55:58: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 21:55:58: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 21:55:59: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 21:55:59: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 21:55:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160480/SRX160480.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling