Job ID = 12597258
SRX = SRX957119
Genome = sacCer3
Started at	210422_15:40:27

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 10711735 spots for SRR1916147/SRR1916147.sra
Written 10711735 spots for SRR1916147/SRR1916147.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 548608501 Apr 22 15:41 SRR1916147.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957119.sum.gz
 output alignment file  :SRX957119.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 153 ms)
 -FM-Index for g2a genome.... finished (elapsed: 301 ms)
 -suffix array for c2t genome.... finished (elapsed: 352 ms)
 -suffix array for g2a genome.... finished (elapsed: 401 ms)
 -reference sequence.... finished (elapsed: 403 ms)
Index loading finished.
File(s) loaded: SRR1916147.fastq.gz.
Time elapsed:199115 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 443585084 Apr 22 15:44 SRX957119.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku 107470883 Apr 22 15:44 SRX957119.sum.gz
SRX957119.sum.gz was set to analysis list.
Analyzing SRX957119.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5136 Apr 22 15:45 SRX957119.mapsum.html
Processing "SRX957119.bisulalign.gz" (443585084 bytes)
***********************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645773 Apr 22 15:46 SRX957119.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    65419 Apr 22 15:46 SRX957119.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957119.graph
Output File (methyl)    :SRX957119.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957119.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957119.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3427398 Apr 22 15:46 SRX957119.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3331362 Apr 22 15:46 SRX957119.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3890109 Apr 22 15:46 SRX957119.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:48 SRX957119.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:48 SRX957119.pmd
-rw-r--r-- 1 okishinya so-ddmku    37199 Apr 22 15:48 SRX957119.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4656263 Apr 22 15:48 SRX957119.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  2016782 Apr 22 15:48 SRX957119.cpg.methyl.bw

=-=-=num_reads	10711727
=-=-=mapping_rate_1	0.885
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.059
=-=-=methyl_rate_cpg_lambda	0.003
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1830
=-=-=coverage	14.6236
=-=-=end	210422_15:48:06
=-=-=duration	.127