Job ID = 12597265
SRX = SRX957117
Genome = sacCer3
Started at	210422_15:42:12

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 11537314 spots for SRR1916145/SRR1916145.sra
Written 11537314 spots for SRR1916145/SRR1916145.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 584199789 Apr 22 15:42 SRR1916145.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957117.sum.gz
 output alignment file  :SRX957117.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 136 ms)
 -FM-Index for g2a genome.... finished (elapsed: 277 ms)
 -suffix array for c2t genome.... finished (elapsed: 421 ms)
 -suffix array for g2a genome.... finished (elapsed: 551 ms)
 -reference sequence.... finished (elapsed: 563 ms)
Index loading finished.
File(s) loaded: SRR1916145.fastq.gz.
Time elapsed:181375 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 463150634 Apr 22 15:46 SRX957117.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku 113847599 Apr 22 15:46 SRX957117.sum.gz
SRX957117.sum.gz was set to analysis list.
Analyzing SRX957117.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5330 Apr 22 15:46 SRX957117.mapsum.html
Processing "SRX957117.bisulalign.gz" (463150634 bytes)
*******************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645773 Apr 22 15:47 SRX957117.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    67200 Apr 22 15:47 SRX957117.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957117.graph
Output File (methyl)    :SRX957117.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957117.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957117.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3415459 Apr 22 15:47 SRX957117.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3139933 Apr 22 15:47 SRX957117.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3502936 Apr 22 15:47 SRX957117.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:48 SRX957117.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:48 SRX957117.pmd
-rw-r--r-- 1 okishinya so-ddmku     3448 Apr 22 15:48 SRX957117.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4672326 Apr 22 15:48 SRX957117.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  1257548 Apr 22 15:48 SRX957117.cpg.methyl.bw

=-=-=num_reads	11537305
=-=-=mapping_rate_1	0.872
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.019
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	172
=-=-=coverage	14.6403
=-=-=end	210422_15:48:29
=-=-=duration	.104