Job ID = 12597254
SRX = SRX957115
Genome = sacCer3
Started at	210422_15:38:57

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 9443269 spots for SRR1916143/SRR1916143.sra
Written 9443269 spots for SRR1916143/SRR1916143.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 479335264 Apr 22 15:39 SRR1916143.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957115.sum.gz
 output alignment file  :SRX957115.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 148 ms)
 -FM-Index for g2a genome.... finished (elapsed: 295 ms)
 -suffix array for c2t genome.... finished (elapsed: 362 ms)
 -suffix array for g2a genome.... finished (elapsed: 428 ms)
 -reference sequence.... finished (elapsed: 431 ms)
Index loading finished.
File(s) loaded: SRR1916143.fastq.gz.
Time elapsed:180165 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 400030457 Apr 22 15:43 SRX957115.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  96115460 Apr 22 15:43 SRX957115.sum.gz
SRX957115.sum.gz was set to analysis list.
Analyzing SRX957115.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5324 Apr 22 15:43 SRX957115.mapsum.html
Processing "SRX957115.bisulalign.gz" (400030457 bytes)
*****: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645773 Apr 22 15:44 SRX957115.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    61685 Apr 22 15:44 SRX957115.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957115.graph
Output File (methyl)    :SRX957115.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957115.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957115.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3369761 Apr 22 15:44 SRX957115.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  2981835 Apr 22 15:44 SRX957115.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3265975 Apr 22 15:44 SRX957115.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX957115.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX957115.pmd
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX957115.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4605974 Apr 22 15:45 SRX957115.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku   568839 Apr 22 15:45 SRX957115.cpg.methyl.bw

=-=-=num_reads	9443262
=-=-=mapping_rate_1	0.905
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.008
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	0
=-=-=coverage	12.7648
=-=-=end	210422_15:45:44
=-=-=duration	.113