Job ID = 12597257
SRX = SRX957113
Genome = sacCer3
Started at	210422_15:40:27

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 10538019 spots for SRR1916141/SRR1916141.sra
Written 10538019 spots for SRR1916141/SRR1916141.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 535434965 Apr 22 15:41 SRR1916141.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957113.sum.gz
 output alignment file  :SRX957113.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 238 ms)
 -FM-Index for g2a genome.... finished (elapsed: 489 ms)
 -suffix array for c2t genome.... finished (elapsed: 557 ms)
 -suffix array for g2a genome.... finished (elapsed: 623 ms)
 -reference sequence.... finished (elapsed: 626 ms)
Index loading finished.
File(s) loaded: SRR1916141.fastq.gz.
Time elapsed:157566 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 425446290 Apr 22 15:44 SRX957113.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku 103869449 Apr 22 15:44 SRX957113.sum.gz
SRX957113.sum.gz was set to analysis list.
Analyzing SRX957113.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5317 Apr 22 15:45 SRX957113.mapsum.html
Processing "SRX957113.bisulalign.gz" (425446290 bytes)
****************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645773 Apr 22 15:45 SRX957113.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    63188 Apr 22 15:45 SRX957113.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957113.graph
Output File (methyl)    :SRX957113.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957113.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957113.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3455045 Apr 22 15:45 SRX957113.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3144513 Apr 22 15:45 SRX957113.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3647185 Apr 22 15:45 SRX957113.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:46 SRX957113.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:46 SRX957113.pmd
-rw-r--r-- 1 okishinya so-ddmku    18734 Apr 22 15:46 SRX957113.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4574377 Apr 22 15:47 SRX957113.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  1539759 Apr 22 15:46 SRX957113.cpg.methyl.bw

=-=-=num_reads	10538011
=-=-=mapping_rate_1	0.898
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.032
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	922
=-=-=coverage	14.3403
=-=-=end	210422_15:47:01
=-=-=duration	.109