Job ID = 12597263
SRX = SRX957112
Genome = sacCer3
Started at	210422_15:41:42

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 11206761 spots for SRR1916140/SRR1916140.sra
Written 11206761 spots for SRR1916140/SRR1916140.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 570453488 Apr 22 15:42 SRR1916140.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957112.sum.gz
 output alignment file  :SRX957112.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 130 ms)
 -FM-Index for g2a genome.... finished (elapsed: 260 ms)
 -suffix array for c2t genome.... finished (elapsed: 385 ms)
 -suffix array for g2a genome.... finished (elapsed: 516 ms)
 -reference sequence.... finished (elapsed: 526 ms)
Index loading finished.
File(s) loaded: SRR1916140.fastq.gz.
Time elapsed:154617 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 472645013 Apr 22 15:45 SRX957112.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku 113772429 Apr 22 15:45 SRX957112.sum.gz
SRX957112.sum.gz was set to analysis list.
Analyzing SRX957112.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5151 Apr 22 15:45 SRX957112.mapsum.html
Processing "SRX957112.bisulalign.gz" (472645013 bytes)
*******************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645773 Apr 22 15:46 SRX957112.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    67259 Apr 22 15:46 SRX957112.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957112.graph
Output File (methyl)    :SRX957112.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957112.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957112.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3433021 Apr 22 15:46 SRX957112.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3248136 Apr 22 15:46 SRX957112.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3690329 Apr 22 15:46 SRX957112.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:47 SRX957112.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:47 SRX957112.pmd
-rw-r--r-- 1 okishinya so-ddmku    16800 Apr 22 15:47 SRX957112.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4695905 Apr 22 15:47 SRX957112.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  1597255 Apr 22 15:47 SRX957112.cpg.methyl.bw

=-=-=num_reads	11206753
=-=-=mapping_rate_1	0.896
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.032
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	827
=-=-=coverage	15.2351
=-=-=end	210422_15:47:12
=-=-=duration	.091