Job ID = 12597278
SRX = SRX957109
Genome = sacCer3
Started at	210422_15:44:54

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 15158680 spots for SRR1916137/SRR1916137.sra
Written 15158680 spots for SRR1916137/SRR1916137.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1358609667 Apr 22 15:45 SRR1916137.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957109.sum.gz
 output alignment file  :SRX957109.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 129 ms)
 -FM-Index for g2a genome.... finished (elapsed: 262 ms)
 -suffix array for c2t genome.... finished (elapsed: 321 ms)
 -suffix array for g2a genome.... finished (elapsed: 378 ms)
 -reference sequence.... finished (elapsed: 380 ms)
Index loading finished.
File(s) loaded: SRR1916137.fastq.gz.
Time elapsed:344730 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1044813538 Apr 22 15:52 SRX957109.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  160489003 Apr 22 15:52 SRX957109.sum.gz
SRX957109.sum.gz was set to analysis list.
Analyzing SRX957109.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5697 Apr 22 15:54 SRX957109.mapsum.html
Processing "SRX957109.bisulalign.gz" (1044813538 bytes)
**: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645773 Apr 22 15:54 SRX957109.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   118725 Apr 22 15:54 SRX957109.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957109.graph
Output File (methyl)    :SRX957109.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957109.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957109.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3645138 Apr 22 15:55 SRX957109.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3752296 Apr 22 15:55 SRX957109.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4302541 Apr 22 15:55 SRX957109.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    18877 Apr 22 15:55 SRX957109.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:55 SRX957109.pmd
-rw-r--r-- 1 okishinya so-ddmku    34441 Apr 22 15:55 SRX957109.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4876237 Apr 22 15:56 SRX957109.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  3801978 Apr 22 15:56 SRX957109.cpg.methyl.bw

=-=-=num_reads	15158676
=-=-=mapping_rate_1	0.939
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.04
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	929
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1694
=-=-=coverage	42.7751
=-=-=end	210422_15:56:04
=-=-=duration	.186