Job ID = 12597288
SRX = SRX957108
Genome = sacCer3
Started at	210422_15:46:39

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 18976985 spots for SRR1916136/SRR1916136.sra
Written 18976985 spots for SRR1916136/SRR1916136.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1703387600 Apr 22 15:47 SRR1916136.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957108.sum.gz
 output alignment file  :SRX957108.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 123 ms)
 -FM-Index for g2a genome.... finished (elapsed: 249 ms)
 -suffix array for c2t genome.... finished (elapsed: 317 ms)
 -suffix array for g2a genome.... finished (elapsed: 379 ms)
 -reference sequence.... finished (elapsed: 381 ms)
Index loading finished.
File(s) loaded: SRR1916136.fastq.gz.
Time elapsed:384226 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1316439490 Apr 22 15:55 SRX957108.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  202228980 Apr 22 15:55 SRX957108.sum.gz
SRX957108.sum.gz was set to analysis list.
Analyzing SRX957108.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5515 Apr 22 15:57 SRX957108.mapsum.html
Processing "SRX957108.bisulalign.gz" (1316439490 bytes)
******************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645773 Apr 22 15:57 SRX957108.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   141792 Apr 22 15:57 SRX957108.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957108.graph
Output File (methyl)    :SRX957108.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957108.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957108.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3669999 Apr 22 15:58 SRX957108.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3922358 Apr 22 15:58 SRX957108.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4492192 Apr 22 15:58 SRX957108.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    32494 Apr 22 15:58 SRX957108.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:58 SRX957108.pmd
-rw-r--r-- 1 okishinya so-ddmku    38598 Apr 22 15:58 SRX957108.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4927394 Apr 22 15:59 SRX957108.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4170859 Apr 22 15:58 SRX957108.cpg.methyl.bw

=-=-=num_reads	18976983
=-=-=mapping_rate_1	0.932
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.045
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	1596
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1898
=-=-=coverage	52.7295
=-=-=end	210422_15:59:01
=-=-=duration	.206