Job ID = 12597280
SRX = SRX957107
Genome = sacCer3
Started at	210422_15:45:24

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 16815631 spots for SRR1916135/SRR1916135.sra
Written 16815631 spots for SRR1916135/SRR1916135.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1513872726 Apr 22 15:46 SRR1916135.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957107.sum.gz
 output alignment file  :SRX957107.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 119 ms)
 -FM-Index for g2a genome.... finished (elapsed: 250 ms)
 -suffix array for c2t genome.... finished (elapsed: 319 ms)
 -suffix array for g2a genome.... finished (elapsed: 387 ms)
 -reference sequence.... finished (elapsed: 390 ms)
Index loading finished.
File(s) loaded: SRR1916135.fastq.gz.
Time elapsed:368304 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1164803906 Apr 22 15:53 SRX957107.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  178679210 Apr 22 15:53 SRX957107.sum.gz
SRX957107.sum.gz was set to analysis list.
Analyzing SRX957107.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5663 Apr 22 15:55 SRX957107.mapsum.html
Processing "SRX957107.bisulalign.gz" (1164803906 bytes)
************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645773 Apr 22 15:55 SRX957107.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   129261 Apr 22 15:55 SRX957107.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957107.graph
Output File (methyl)    :SRX957107.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957107.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957107.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3657088 Apr 22 15:55 SRX957107.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3922663 Apr 22 15:55 SRX957107.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4525747 Apr 22 15:55 SRX957107.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    35520 Apr 22 15:56 SRX957107.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:56 SRX957107.pmd
-rw-r--r-- 1 okishinya so-ddmku    45390 Apr 22 15:56 SRX957107.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4886706 Apr 22 15:56 SRX957107.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4292524 Apr 22 15:56 SRX957107.cpg.methyl.bw

=-=-=num_reads	16815628
=-=-=mapping_rate_1	0.933
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.06
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	1746
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2233
=-=-=coverage	46.8242
=-=-=end	210422_15:56:53
=-=-=duration	.191